Ochotona princeps (American pika): 101525834
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Entry
101525834 CDS
T07609
Symbol
TAF6
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101525834 (TAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opi03021
]
101525834 (TAF6)
03036 Chromosome and associated proteins [BR:
opi03036
]
101525834 (TAF6)
Transcription machinery [BR:
opi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101525834 (TAF6)
Coactivators
SAGA/TFTC/STAGA complex
101525834 (TAF6)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101525834 (TAF6)
STAGA complex
101525834 (TAF6)
TFTC complex
101525834 (TAF6)
SAGA complex
101525834 (TAF6)
SLIK complex
101525834 (TAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Bromo_TP
TFIID-18kDa
Histone
Motif
Other DBs
NCBI-GeneID:
101525834
NCBI-ProteinID:
XP_004586983
LinkDB
All DBs
Position
6:complement(24710522..24715026)
Genome browser
AA seq
677 aa
AA seq
DB search
MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHM
GKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINT
PLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQDEDGPLKS
KGQGAAPTDSKGKEKKAPPLLEGTPLRLKPRSTHELSVEQQLYYKEITEACVGSCEAKRA
EALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKY
VHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFT
KSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRSVLDGPVLSNIDRIGA
DHVQSLLLKHCAPVLAKLRPPPDNQDAYRAEFGSLGPLLCSHVVKARAQAALQAQQVNRT
TLTITQPRPTLTLSQAPQPGPRTPGLLKVPGSITLPVQTLVSARAAAPPQPSPPPTKFIV
MSSSSASSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATSAPPSTAPSGPG
SVQKYIVVSLPPTGEGKGGPASHPSPVPPPSSSPSPLGGSALCGGKPEAGDSPPPAPGTP
KANGSQPSGSGSPQPAQ
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagaagaaactgaagcttagcaataccgtgctgccctcggaatccatgaaa
gtggtggccgaatccatgggcatcgcccagattcaggaggagacctgccagctgctgaca
gacgaggtcagctaccgcatcaaggagatcgctcaggatgctctgaaattcatgcacatg
ggaaagcggcagaaactcaccaccagcgacattgactatgccctgaagctgaagaacgtc
gagcccctctatggcttccatgctcaggagttcattcctttccgttttgcctctggcggc
ggacgggagctttacttctatgaagagaaggaggttgatctgagcgacatcatcaacacc
cctctaccccgggtgcccctggacgtctgcctcaaagctcactggttgagcattgaagga
tgccagccagctataccagagaacccacccccagctcccaaagaacagcagaaggccgag
gccacggaacccctcaagtccgcaaaacccggacaagatgaagatggacccctgaaaagc
aaggggcaaggggccgcgccaactgacagcaaagggaaagagaagaaggcacctcccttg
ctggaggggacacctttgcgcctgaagccccgcagcacccacgagctgtccgtggagcag
cagttgtactataaggagattaccgaagcctgtgtgggctcctgcgaggccaagagagca
gaggctctacagagcattgctacagacccagggctctaccagatgctgccacgattcagc
accttcatctcggagggggtccgtgtgaacgtggttcagaacaacctggccctgctcatc
tacctgatgcgcatggtgaaggccctgatggacaaccctacgctctatctagaaaaatac
gtgcatgagctgattccagccgtgatgacctgcatcgtgagcaggcagctgtgcctgcgg
ccggatgtagacaatcactgggcactccgggactttgctgcacgcctggtggcccagatc
tgcaagcatttcagcacaacgaccaacaacatccagtcccggatcaccaagaccttcacc
aagagctgggtggatgagaagactccgtggacaactcgttatggctccatcgcaggcctg
gcggagctgggacatgatgtgatcaagactctgatcttgccacggctacagcaggagggg
gagcggatccgcagcgtcctggatggtcccgtgctgagcaacattgaccgcatcggagcc
gaccacgtgcagagcctcctcctgaaacactgtgcccctgtcctggccaagctgcgccca
ccacccgataatcaagacgcctatcgggcggaatttgggtcccttgggcccctcctctgc
tcacacgtggtcaaggcacgggcccaggctgctctgcaggcccagcaggtcaataggact
acactgaccatcacacagcctcggcccacactgaccctctcgcaggccccacaacctggc
cctcggacccctggcttgctgaaggtgccgggctccatcacgctgcctgttcagacattg
gtgtctgcgcgagctgctgccccaccccagccttcccctcctccaaccaagtttattgtc
atgtcatcctctagcgcgtcatccacccaacaggttctctccctcagcacctcagcccct
ggctcaggctccaccactacctctcctgtcaccaccacagtccccagcgtgcagcccatc
gtcaagctggtctctacggccacctctgcacccccaagcactgctccttctggtccaggc
agtgtccagaaatacattgtggtctcacttccccctacaggggagggcaaggggggtcct
gcctcccatccttctccagttcctcccccatcatcttccccctcccccttggggggcagt
gccctctgtgggggaaaaccagaagcaggggacagtccccctccagccccaggaactcca
aaggctaatggctcccagccctctggatcaggctcccctcagcctgctcaatga
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