Ochotona princeps (American pika): 101525841
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Entry
101525841 CDS
T07609
Symbol
LRRCC1
Name
(RefSeq) leucine-rich repeat and coiled-coil domain-containing protein 1 isoform X1
KO
K16475
leucine-rich repeat and coiled-coil domain-containing protein 1
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101525841 (LRRCC1)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
101525841 (LRRCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_9
LRR_8
LRR_6
Motif
Other DBs
NCBI-GeneID:
101525841
NCBI-ProteinID:
XP_004588142
LinkDB
All DBs
Position
3:complement(12058555..12119452)
Genome browser
AA seq
1028 aa
AA seq
DB search
MEATGEAEVATEEGDSSCGDVCFMDKGLQRISQLSLDSTLHAINLHCNNISKIEAIDHIW
NLQHLDLSSNQISQIEGLNTLTKLCTLNLSCNLITRIEGLEALINLTKLNLSYNHINDLS
GLMPLHGLRYKLRYIDLHSNCVDSIHHLLQCTVGLHFLTNLILEKDGEGNPVCHAPGYRT
IILQTLPQLRVLDCKNIFGEPVNLTDMSSSRLPSFEGLLDNLTSSDCPLNMSEDEVVDCM
PVVTPPIEELPPMEQYTSTPPETVLTSFLSVCPSSEPEKCNAENDFQNDMKLQKLDDQIL
QLLNDTSNCIADTVPEQDLCPKRDTDITSESECGNRKECCRRAPRRSKIPYYCKTIQTIR
HHNKNSCHFVSCNRKMKQPYFKELYVRSSLANCNVSQDSEDQKTDIVKVDNSSSEDNTYR
CLVEQLDQEREMRWKAEQAEKKLMDYIDKLHKQASEKKDVHSLALLTTDRLKDIIFKERN
SKAQLEIMVHRLQNEIKKLSIELIKARDQQEDHIRHLRTLEKALEKMERQKGQQQAAQMR
LLQEVELKAAAADREINLLRTSLHQEKEQVQQLHELLALRQQEHRKELETREFISEAEFQ
DALAKEIAKEKRKHEQEIKDYQEKIDLLNQQYMDLENEFRIALTLEARRFKNVKDGFENV
ATELAKSKHALIWAQRKENESSSLIKDLTSMVKEQKTKLAEVSKLKQETAANLQNQINTV
EILIEDDKQKSIQIELLKHEKVQLISELAAKESLIYGLRTERKVWGYELAQQGSSLAQNR
GKLECQIESLCRENESLRKANESDSDALRIKSKIIEDQTESIRKLKDCVQEKDEQIKALK
DKMAEKEKCMQEQLDEKSSQLDNVVEQLERHNERKEKLKQQLKAKELELEEIRKAYSTLN
QKWRDKGELLCHLETQVKEAKEKFENKERKLKAERDKSIELQKDAIEKLHCMDDAFKKQV
DAIVEAHKAEMLQLANEKQKCIESANLKVHRVEEEMRGLLEETCKNKKAMEEKIRQLAFA
LSEIQQEM
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgacgggagaggcagaagtcgcaaccgaggaaggcgacagcagctgcggggat
gtgtgcttcatggacaaaggtctacagagaatatcacagttatctttagattcaaccctt
catgccatcaatctccattgcaacaacatctctaagattgaagccattgatcatatttgg
aacttacaacatttagacctgtcatctaatcaaataagtcaaattgaagggctaaacact
ctgacaaaactatgcactttaaatttgtcctgcaacttgatcacaagaatagaaggactt
gaagcactaattaatctgactaaactgaatttatcttataaccacataaatgatcttagt
ggattgatgcccctccatggacttaggtataagcttagatatattgacctgcatagtaac
tgtgtagatagcatccaccacttacttcagtgtacagtaggattgcactttttgaccaat
cttattttggagaaggatggagagggaaatcctgtctgtcatgcaccagggtacagaaca
attattctccagacattgccacagcttagagtcctagattgtaagaatatctttggtgaa
ccagtcaatttgacagatatgagttcatcacgccttccgagctttgaaggtcttttggat
aatttaacttcttctgactgtcccctaaatatgagtgaagatgaggttgttgattgcatg
ccagtggtaaccccacccattgaggaattacctcccatggagcagtatacaagcacacca
ccggagaccgttttgacatcttttttatctgtgtgtccatcttcagagccggagaaatgt
aatgccgaaaatgattttcaaaatgacatgaaacttcagaaattagatgatcaaatttta
cagcttcttaatgatacttctaattgtatagcagatactgttcctgagcaagacctctgc
ccaaaaagagatacggatataacttctgaaagtgaatgtggaaacagaaaagaatgctgt
agaagggctcctcgacgatcaaaaatcccatattattgcaaaacgattcaaactattagg
caccacaataaaaacagttgccattttgtgagctgtaaccgtaaaatgaaacaaccatac
tttaaggaattatacgtcagatcatctttagcaaattgtaatgtatcacaagactcagag
gaccagaagactgatatcgttaaagtagacaacagtagttctgaagacaacacttaccgg
tgccttgttgaacagctagaccaagagagagaaatgagatggaaagctgaacaagctgaa
aagaaacttatggattacattgataaacttcataaacaagcaagtgaaaaaaaagatgtt
cacagtcttgctctgctaaccacagatagattaaaggatattatttttaaagagagaaat
tccaaagcacaacttgaaattatggttcacagacttcaaaatgaaattaaaaagctgagt
attgaattaattaaagcaagagatcaacaagaggatcacattagacacttaaggaccctg
gaaaaagcattagaaaaaatggagaggcaaaaagggcagcagcaggctgcgcagatgaga
cttctccaagaggtggaactcaaagctgcagctgctgatagagaaataaacttactcagg
acttcccttcatcaggagaaggaacaagtacaacagcttcatgaactccttgccttgaga
cagcaggaacacagaaaggaacttgaaacaagggaatttatttctgaagctgaattccag
gatgccttagccaaagaaatagccaaggaaaagagaaaacatgagcaagagataaaagat
tatcaagagaaaattgatttattaaaccagcagtatatggacttagaaaatgaattccgt
attgccttaacccttgaagccaggagatttaagaatgttaaagatggttttgaaaatgtt
gcaactgagttagcaaagagtaaacatgctcttatttgggctcaacgaaaagaaaatgag
tcttcctctttaattaaagatctgaccagtatggtgaaggaacaaaaaaccaaactcgcg
gaagtttctaaattaaaacaggaaacagcagcaaatttgcaaaatcaaatcaacactgtt
gaaattctgattgaagatgacaagcagaagagtattcaaatagaacttctcaagcatgaa
aaagtccagcttatttcggaactagcagcaaaagaatcactcatttatggtttaaggaca
gaaagaaaagtatggggatatgaactggcccaacagggatcatctctagcccaaaatcgt
gggaaattagagtgccaaattgaaagtttatgtcgagagaatgaatctctgcgaaaggca
aacgaaagtgatagtgatgcattaagaataaagagcaaaattatagaagatcagactgaa
agcattcgaaaattaaaagattgtgtacaagaaaaagatgaacaaatcaaagcattaaaa
gataagatggctgagaaagaaaagtgtatgcaagaacagcttgatgaaaaatcttcccaa
ctagataatgtagttgagcaattggaaagacacaatgaaagaaaagaaaaacttaagcag
caattgaaagcaaaggaattggaacttgaagaaattaggaaagcttacagtacgcttaat
cagaaatggcgtgataaaggagaacttctgtgtcaccttgaaacacaagtaaaagaagcg
aaggaaaaatttgaaaacaaggaaaggaaacttaaagcagaaagagacaaaagtattgaa
ctacaaaaggatgcgatagaaaagcttcattgtatggatgatgcctttaaaaagcaagtt
gatgcaattgttgaagctcataaagctgaaatgttacaactggcaaacgaaaagcagaag
tgcattgaatctgcaaacttaaaggttcatcgagttgaagaagaaatgcgtggacttttg
gaagaaacatgtaaaaacaaaaaagcaatggaagaaaaaatcaggcaacttgcttttgct
ctaagtgaaattcagcaagaaatgtga
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