Ochotona princeps (American pika): 101525892
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Entry
101525892 CDS
T07609
Symbol
LRIG2
Name
(RefSeq) leucine-rich repeats and immunoglobulin-like domains protein 2
KO
K24609
leucine-rich repeats and immunoglobulin-like domains protein 2
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101525892 (LRIG2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
Ig_2
LRR_5
LRR_4
ig
LRR_1
LRR_9
V-set
C2-set_2
Ig_5
LRR_14
C2-set_3
LRRCT
C1-set
DUF4781
Motif
Other DBs
NCBI-GeneID:
101525892
NCBI-ProteinID:
XP_004582197
LinkDB
All DBs
Position
13:100692274..100749403
Genome browser
AA seq
1031 aa
AA seq
DB search
MAPAPLGVLGCRSAPLWWLLFLVQAVLLPAAAAGLCPGLCFCRMPLLDCSRRKLPASSWR
ALSGPLPPDTASLDLSHNRLSNWNITLESQTLQEVKMNYNELTEIPSFGEPTSNITLLSL
VHNMIPEINAEAFQLYSALESLDLSSNIISEIKTSSFPRMQLKYLNLSNNRITTLEAGCF
DNLSSSLLVVKLNRNRISMIPPKIFKLPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQ
RNGISKLKDGAFFGLNNMEELELEHNNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAW
EFCQRLSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLILQ
GNQIKSITKKAFVGLESLEHLDLNNNAIMSIQENAFSQTHLKELILNTSSLLCDCHLKWF
LKWLVDNNFHHSVNVSCAHPEWLAGQSILDVDVKDFVCDDFLKPQIRTHPETRVALRGMN
VTLTCSAVSSSDSPMSTVWRKDSEILYDVDIENFVRYWQQAGEALEYTSILHLINVNFTD
EGKYQCIVTNHFGSNYSQKAKLTVNEMPSFLKTPMDLTIRTGAMARLECAAEGHPAPQIS
WQKDGGTDFPAARERRMHVMPEDDVFFIANVKIEDMGVYSCMAQNEAGGLSANASLTVLE
TPSFVRPLEDKTITRGETAVLQCIAGGSPAPRLNWTKDDGPLLVTERHFFAAANQLLIIV
DAGLEDAGKYTCIMSNTLGTERGHIYLNVISSPNCDSSQGGLGHEDDAWTTVGIVIIVVV
CCVVGTSLIWVIVIYHMRRKSEDYSITNTEELNLPADIPSYLSSQGTLSEPQEGYSNSEA
GSHQQLMPPGNGYIHKGTEGGAGPRVMCSDCCENANMYSRSRDYCPYTYVAEEDVLDQTL
SSLVGQMPKEPYLTHPPQDATVLDGLVASADRELSAFPTNHERTNEKKLPSTKANSEALQ
HPLWNMNRELGLPHPPCSQQPVFETPRLHQKEGLAERDPDCSSSSVTCHRLHDHTLDFSR
TQDIQNCPEGT
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggctcccctaggcgtcctggggtgtcggtccgcacccctgtggtggctcctc
ttcctcgtgcaggccgttctcctgcccgccgctgcagccggtctctgccccgggctctgc
ttttgccgcatgcctctgctggactgtagccgcaggaaactgcccgcgtcgagctggagg
gcgctgtcgggcccgctgccccccgacacggccagcttggatttgagtcataatcgactc
tctaactggaacatcaccttggaatcacaaacattacaggaagtgaaaatgaactacaat
gagttaacagaaataccatcttttggagaaccaacatccaatattactctactttcacta
gtccataatatgattccagaaatcaatgcagaggcattccagctttactctgctcttgaa
agtttagacctcagctcaaacataatatccgaaatcaagacatcctcgtttcctcgaatg
cagcttaagtacctgaatttgagtaataacaggataaccaccttggaagctggttgcttt
gataacttgtcaagttccttattagtggtaaagttaaaccggaaccgaattagcatgatc
ccaccaaagatcttcaagctgccccacctccagtttttggaacttaaaagaaacaggatt
aaaattgtagaaggtcttacattccaagggcttgattctttaagatctttgaaaatgcag
cggaatggaattagtaaacttaaggatggagcattctttggcctcaataacatggaagaa
ctagaactggaacacaataatcttactcgggtgaacaagggatggttgtatggcttgcga
atgttacagcagctctatgtgagccagaatgccattgaaagaatcagccccgatgcatgg
gagttctgccaaaggctgtctgaacttgatttgtcttataaccagctgacccgcctggat
gaatcggcctttgtgggtctgagtttactggagagattaaatttgggggacaacagagtc
actcacattgctgatggtgtatttagatttctttccaatcttcagactctaatattacaa
ggaaaccagattaaatcaattacaaagaaagcatttgttggtctcgaatctcttgagcat
ctggatttgaacaacaatgctataatgtctattcaagaaaatgctttttctcaaactcac
ttgaaagaattgattctgaacacaagcagcttgctctgtgactgccacttaaagtggttc
cttaaatggctggttgataacaactttcatcattctgtgaacgtgagctgtgcgcatcct
gagtggctcgctgggcaaagcatcctggatgtggatgtgaaagattttgtctgtgatgat
tttctgaagccgcagatacggacacatcctgaaacgagggttgctctgaggggaatgaat
gtgactctgacgtgcagtgccgtgagcagcagtgactcccctatgtccaccgtgtggcgc
aaagacagcgagatcctgtacgacgtggatattgagaactttgtgcgttattggcagcaa
gctggagaagctctggagtacactagtatcttacatctgatcaatgtgaatttcacagat
gaagggaaatatcagtgtatcgttacaaatcactttggttccaattattctcagaaagcc
aaactgactgtgaatgagatgccatcctttctgaaaacgccaatggacctgaccatccgc
actggtgccatggccagattggaatgtgctgcagaggggcaccccgcacctcagatttct
tggcagaaggacggtggtactgactttcctgcagctcgagagaggcgcatgcatgtcatg
cctgaggacgatgtcttcttcatcgccaacgtgaaaatagaagatatgggagtctacagc
tgcatggcgcagaacgaggcaggaggcctctcagccaacgcctcgctcacagttttagag
acaccctcctttgttaggcccctggaggacaagacaataacccgaggcgaaacagctgtg
ctgcagtgcatagctggaggcagtcctgcccctcgcctgaactggaccaaagatgatggc
ccactgctggtgacagaacgacacttctttgctgctgccaaccagctgctcatcattgta
gacgctgggctggaagatgctggaaagtacacctgcattatgtccaacacccttggaaca
gaacgcggccacatttacctaaatgtcatttcatcccccaattgcgactcttctcagggt
ggccttgggcatgaagatgatgcctggaccacagttggcattgtcatcatcgttgtggtc
tgctgtgttgtgggcacttccttgatctgggtcattgtcatttaccacatgagaaggaaa
agcgaagactatagcatcaccaacacagaggagctcaatttacctgcagacattcccagt
tacttgtcatcccagggaacgttgtcggagccgcaggaaggctacagcaactcggaggca
ggcagtcatcaacagctcatgcctcctggcaacggctacatccacaaaggcactgagggt
ggcgctggtccccgggtgatgtgttcagattgctgtgagaatgccaacatgtactccagg
agccgggactactgtccgtacacctatgtcgctgaggaggatgttctagatcagacactg
tccagccttgtgggtcagatgcccaaagagccttacttgacacatcctccccaagacgct
acagtcctggacggcctggtagcgtcagcagacagagagctgtcagcctttcccaccaac
catgagaggacaaatgagaagaaactaccctccacgaaggcaaacagtgaagcactgcag
caccctctgtggaacatgaacagagagctgggcctgccccatcctccctgttcccagcag
ccagtcttcgagacaccacggctccatcagaaggaaggcctggccgagagggatccagac
tgctcgtcctcctccgtgacctgccacaggttacacgatcacactcttgatttcagtagg
actcaggacattcaaaattgtcctgagggcacatga
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