Ochotona princeps (American pika): 101525944
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Entry
101525944 CDS
T07609
Symbol
GARRE1
Name
(RefSeq) granule associated Rac and RHOG effector protein 1
KO
K26671
granule associated Rac and RHOG effector protein 1
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101525944 (GARRE1)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101525944 (GARRE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4745
Stu2_CTS
Motif
Other DBs
NCBI-GeneID:
101525944
NCBI-ProteinID:
XP_004595078
LinkDB
All DBs
Position
5:complement(12506952..12564754)
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AA seq
1070 aa
AA seq
DB search
MYCCSAQDSKMDYKRRFLLGGSKQKVQQHQQYPLPELGRALSAPLASTATSAPLGSLTAT
GSCHHTMPHSTPIADIQQGISKYLDALNVFCRASTSLTDLFSTVFRNSHYSKAALQLKDV
QEHVMEAASRLTSAIKPEIAKMLMELSAGAATFTDQKEFSLQDIEVLGRCFLTVVQVHFQ
FLTHALQKVQPVAHSCFAEVVVPEKKNSNSGGSLSSMGHTPELEEAVRSWRGAAEATSRL
RERGCDGRLAGIEVQQLFCSQSAAIPEHQLKELNIKIDSALQAYKIALESLGHCEYAVKA
GFHLNPKAIEASLQGCCSEAEAQQTGRRQTPPQPMQCELPTVPVQIGPHFLKGVSFNESA
ADNLKLKTHTMLQLIKEAGCYNGITSREDFPVTEVLNQVCPSTWRGACKTAVQLLFGQAG
LVVVDTAQIENKEAYAPQISLEGSRIVVQVPSTWCLKEDPATMSLLQRSLDPEKTLGLVD
VLYTAVLDLNRWRAGREQVLPCIQIQLQREICDLGSHADLPSGNGNKSSGGLQKTFSKLT
SRLTKKASCTSSSSNTNYSIPNTPSKNIFIAGCSEEKAKMPSNIDTRLQSILNIGNFPRT
TDPSQSAQNSSNPMANGFLMERHETFPHGDDGKDEKGMNLPSDQEMQEVIDFLSGFNMGQ
SHQGSPLVTRRNSSTAAMVTDQKAGPMQPQQPSLPVPPAPRPPQAGAHTTLTPQPGLAPQ
QQSPKQQQPQVQYYQHLLQPIGPQQPAPQPRAPGKWVPGSSQQPAQPVGPGLSPLGQWPG
MSDLSSDLYSLGLVSSYMDNVMSEVLGQKPQGPRNNTWPNRDQNEGVFGMLGEVLPFDPA
VGSDPEFARYVAGVSQAMQQKRQAQHGRRPGHPRGHWPPMDDAHRTWPFPEFFTEGDGLH
SGWAGAQGDSASSSDEASSANGDSLFSMFSGPDLVAAVKQRRKHSSGEQETSTLPSPPLL
TTVEDMNQENKTKTWPPKAPWQHPSPLPSTLPSPSTPLYAVASPGSQWNDTMQMLQSPVW
AATSDCSGASFSYVQTPPQPPPPPAHKAAPKGFKAFPGKAERRPAYLPQY
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgtattgctgcagtgcccaggacagtaaaatggactacaagcggcgcttcctgcttggc
gggtccaagcagaaggtgcagcagcaccagcagtaccccctgcctgagctgggccgggcc
ctgagtgcccccctggcatccacagccacctccgcccccctgggcagcctgactgccacc
ggcagctgccaccacactatgccccactccacccccatcgccgacatccagcagggcatc
tccaagtacctggacgccctcaacgtcttctgccgcgccagcacctccctcacggatctc
ttcagcactgtgttcaggaactctcactactcaaaggcggccctgcagctcaaagacgtg
caagagcatgtaatggaagcagccagccggctgacctcggccatcaagcccgagattgcc
aagatgctgatggaacttagtgccggggctgccaccttcacagaccagaaggagttcagc
ctccaggacattgaggtgttggggagatgcttcctgactgtggtgcaagtccatttccag
tttttgactcatgcattacagaaggtccagccggtggctcactcttgttttgctgaggtt
gttgtgccagaaaaaaagaatagcaacagtggcggcagcttatccagcatgggccacacg
ccagaactggaggaagctgtgcggtcctggcgcggggctgccgaggcaacatctaggctg
agagagagaggctgcgatggccgcttggcaggaattgaagttcagcagctcttctgctct
caaagtgcagcaattcctgagcaccagctaaaggaactgaacataaaaattgacagtgct
ttacaagcgtataagatagctctggaaagcttaggtcactgtgaatatgcagtgaaagct
ggcttccacctgaatccaaaggcaattgaagcaagtttgcagggctgctgcagtgaggcg
gaagcccaacagacagggcggaggcagacacccccacagcccatgcagtgtgagctcccc
actgttcccgtgcagataggaccacacttcctgaagggtgtctcctttaacgagtcggcc
gctgacaacctcaaactcaagacgcacacaatgttacaactcatcaaagaagctggctgt
tataatggaatcacatcccgggaagactttcctgtgactgaagtgctcaaccaggtgtgc
ccgtccacctggcggggtgcctgcaagactgccgtgcagctgctcttcggccaggctggg
ctggtggtggttgacacagcacagattgaaaataaagaagcctatgcaccccaaatcagt
ttagaaggttccagaatcgtggttcaagtcccatccacatggtgcctgaaagaagacccg
gccaccatgtccctgctgcagagaagcctcgaccccgagaagacgctgggcctggttgac
gtgctctacaccgctgtgctggacctgaaccgctggagggcagggagggaacaggtctta
ccctgcatacagatccagcttcaaagggaaatctgtgatttgggaagtcacgctgacctg
ccttctggaaatggaaacaaatcttcaggtggcttgcagaagacattctccaaactgacg
tcccggctcaccaagaaagcttcatgtaccagttcaagcagcaacacaaattattccatc
ccaaataccccttccaaaaatattttcatagctgggtgttcagaagagaaggccaaaatg
cccagcaatattgatacacggttgcaaagcattttgaacattggtaatttccctaggact
acagacccttcccagtcagctcagaattccagtaatccaatggccaatggttttctcatg
gagagacatgagaccttcccacacggggatgatggcaaggatgagaaggggatgaattta
ccaagcgatcaggaaatgcaggaggtgattgattttctctccggctttaacatgggccag
tcacatcagggttccccactggtgacaagacgtaattcttctactgcagccatggtgacc
gaccagaaggcaggacccatgcagccacagcagccatccctgccagtgccgcctgcacca
cggccaccccaggctggagcacataccactctgacaccacaaccaggactggcacctcag
cagcagtccccaaagcagcagcaaccccaggttcaatactaccaacacctgcttcagccc
attggaccacagcagcccgcaccccagcctcgagcccccgggaaatgggtccctggctcg
tcgcagcagccagcacagcccgttgggccaggcctgtctcctctcggccagtggcctggc
atgtctgacctcagctcggacttgtacagcttgggtctcgtgagcagctacatggacaat
gtgatgtcggaggttttaggacagaagccacagggacctagaaataacacctggccgaac
cgtgaccaaaatgagggtgtctttggaatgttgggagaggttctgccttttgatcctgca
gtgggctctgaccctgagtttgcacgctatgtggcgggagtgagccaggccatgcagcag
aaacggcaagcccagcacggccgccgtccaggtcacccccggggccactggcctcccatg
gatgatgcccatcggacctggccattcccagagttcttcacagaaggggacggcctgcac
agcggctgggctggtgctcagggagactccgccagctcgagtgacgaggcatcctcggcc
aatggggacagcttgttctccatgttttcaggtcctgatctcgtggctgctgtcaagcag
agaaggaagcacagcagtggcgagcaggagaccagcacgctgccctcaccacctctcctc
actaccgtggaggacatgaaccaggaaaacaaaaccaaaacgtggccacccaaagcaccc
tggcagcacccctccccacttcccagcacactgcccagcccgagcacaccactctatgca
gtcgccagccccggcagccagtggaacgacaccatgcagatgctgcagtcaccagtgtgg
gctgccaccagcgactgcagcggcgcctccttcagctacgtgcagactcctccacagcct
ccacccccaccagcacacaaggcggcacccaagggcttcaaggccttccctgggaaggct
gagcgcaggccggcttacttgccccagtactga
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integrated database retrieval system
