KEGG   Ochotona princeps (American pika): 101526043
Entry
101526043         CDS       T07609                                 
Symbol
POLQ
Name
(RefSeq) DNA polymerase theta
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
opi  Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:opi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:opi03400]
    101526043 (POLQ)
Enzymes [BR:opi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     101526043 (POLQ)
DNA repair and recombination proteins [BR:opi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    101526043 (POLQ)
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII DUF4332 Helicase_dom4_arc HHH_5
Other DBs
NCBI-GeneID: 101526043
NCBI-ProteinID: XP_004578333
LinkDB
Position
14:complement(24991008..25103975)
AA seq 2323 aa
MNLLRQSGKRRRSVSDSDSFSASGDDSPASARLLEGPVLSPPPGLGRSLQDRGGRACGQT
LPDDEIDKLLLANWGLPKAVLEKYDSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAG
KTLVAELLILKRVLETQKKALFILPFVSVAKEKKCYLQSLFQEIGIKVDGYMGSSSPSVR
FSSVDIAVCTIERANGLINRLIEENKLDLLGMVVVDELHMLGDSHRGYLLELLLTKICYI
TRKSASCRSDLASPLSNAVQIVGMSATLPNLQLVASWLNAELYHTDFRPVPLLESIKIGN
AIYDSSMKLVREFQPLLQVRGDEDHVVSLCYETVRDSHSVLLFCPSKKWCEKLADVIARE
FYNLHRQAEGLVKPPEFPPVILEQKGLLEVTDQLKRLPSGLDSVLRKTVPWGVAFHHAGL
TFEERDVIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPVFSGRTLDVLTYKQMVGR
AGRKGVDTIGESILVCKNSEKSKGIALLQGSLKPVRSCLGKQEGEEVTASMVRAILEIIV
GKVASTSQDMQTYASCTFLAASMKEGKQEIQGNQPSGELGAIEACVIWLLENEFIQITET
GDGTEGKVYHPTHLGSATLSSSLSPTDTLDIFADLQRAMKGFVLENDLHIVYLVTPMFED
WTTIDWYRFFCLWEKLPTSMKRVAELVGVEEAFLARCVKGKVIARTERQHRQMAIHKRFF
TSLVLLDLISEVPLKEINQKYGCSRGQIQSLQQSAAVYAGMITVFSNRLGWYNMELLLSQ
FQKRLAFGIQRELCDLVRVSLLNAQRARFLYASGFVTVADLARATVTEVEVALKNAAPFK
STRKAVDEEEEAVEERRSLRTMWVSGRKGLTEREAAALIVEEAKVILQQDLVEMGVQWEP
YSPLSSDIRLMNSSKSDVKEHTSHAKSFCKKLTSRNRSSTSFSDSPTRVHNLHKSRDQAN
SFYGKLQDGNQEHERQSVFRARKRAFLDRDREKSGNPLCEEQIGNKKVVQTSSPDKIEKT
SVYSGSSGKSTAFRILKPRKQLKRSRNSRPVEDSEMQRSGVRGQTTSSPICEDSFTFNEK
NMEFRSPGLFPENLSLDAKEKCKRKSFPLQTEQSCSKNRTISSGTPGACFVTGSQRKNVT
HQDAINLVREPARGSAAVGTEEGNGVLRQSHPENQNGCVKHHDTLPTKQCMEKHADKQTN
TDTKHEDARERHMPCEAVSNWTDRDSSGAATTCLNMKVNSEKTPSHFLASGDKGSTTEKP
RRILLPVGTFGKIDQLENFLNSSRVQGKADVYITNQTKNDHVPNLGLIPCDFEDSLYLDT
QSERMIQQVTTENAMLAAQGNSLARQSSVTSPQNELDTAFSGEQCPPGATRTDQLDLKTI
EVRKQSTGAHGIDNQAPENHTCHSPVLLEEHKPCFKGNELSVTDSQLTSFLQGYQTQGTV
KSVTALCPQKSSPIGGEGESPPTPETSLNMSDCLLFDSFSDDGFIKEQPLEVPAKESVLS
DRTSENCRGCVSPHQEDLIEKMNKSENQGTQQWAACFSDESVLFSEMDSSQMVEALDNAD
GFFVSEKEGAAVSLRTLELDDAGKDHCPREVTEEQSEKNPKSRLFGARQNDSFLWSGASF
DLSPGLQRILDKVPSPLEKETVKTMTVNVSSLEGTTKLNEKQELISHLGTSQVQGISIFP
NNEVVNTKGEPLEYNARRREASSLLPAKEGCAVDDNGLVPRTPIPTSASKLPLSGILGTS
VKLEKTRSVVPPFDSPSNINHKLSPEHRNGSKDDSPVRDTRFSLQLSQDELQSTQDSCSS
ESLAIIDVASDRTLFQTFINEWQCKKRFSISVACEKMRPSRSVAIGGRFKQVDSSQETSS
GADGFPVPGCDDMLVVGLAVCWGGRDAYYFSLQKEQKSSDIFCKVEMPSQYCLALLELNG
IGFSTTECESQKHIMQAKLDAIETEAYQLAGHGFSFTSSDDIAEVLFLELKLPPNGDLKN
QGSKKTLGSTRRGNDKGCKLRLGRQLSTSKDVLNKLKALHPLPGLILEWRRITNAITKVV
FPLQREKRLNPILGMERIYPVSQSHTATGRISFTEPNIQNVPRDFEIKMPTLVGESPPPA
GQGRGLFPEGRSYTKTRICYGIIYGMGAKSLGEQMGVKENDAACYIDSFKSRYTGINHFM
KETVKKCRRDGFVQTILGRRRYLPGIKDNNPYHKAHAERQAINTTVQGSAADIVKIATVN
IQKQLETLCSAFKSHGHREGMIQSNKTGLLPKRTLPGMFCPVRGGFFILQLHDELLYEVA
EEDVVQVAQIVKNEMENAIKLSVKLKVKVKIGSSWGELKDFDV
NT seq 6972 nt   +upstreamnt  +downstreamnt
atgaacctcctgcgccagagcgggaagcggcggcgttccgtctcggactcagactcgttc
tcggccagcggcgatgacagccccgccagcgcccggctcctcgaggggcccgtgctgagc
ccgccgcccggcctcggacgcagcctgcaggaccgcgggggccgcgcatgcggacagaca
cttcctgatgatgaaattgacaagctgctgctggccaactgggggctccctaaggcggtt
ttggaaaaatatgacagttttggtgtaaaaaagatgtttgaatggcaggcagagtgcctt
ttgcttggacaagtcctggaaggaaagaatttagtttattcagcgcctacaagtgccggg
aagacgcttgttgcagaattacttatcttgaagcgggttttagaaacgcagaagaaagct
ttattcattcttccctttgtttctgtggctaaagagaagaaatgctatctccagagtctg
tttcaggaaataggaataaaggtggatggttatatgggcagtagctctccatcagtgcgc
ttttcttccgtggatattgctgtttgcacaattgagagagccaatggtctgatcaatcgt
ctcatagaggaaaataagctggatctgttaggaatggtggtcgtggacgagttgcatatg
ctgggagactctcatcgagggtatctgctggaacttctgttgaccaagatctgttacatt
acacggaaatcagcctcctgccggtcggatttagccagccctctgtctaatgctgtgcag
attgtgggcatgagtgccactcttcctaacctgcagcttgtggcttcatggctcaatgct
gagctctaccacactgacttccggcctgtaccacttctggagtcaataaaaattggaaat
gccatatatgactcttcaatgaagcttgtgagagaatttcagcccctgctacaagtgagg
ggagatgaggaccatgttgttagtttatgttatgagactgttcgtgatagccactcagtg
ttacttttctgcccgtcaaaaaaatggtgtgaaaagttggctgatgtcattgcccgagag
ttttataatctccaccgtcaagcggagggattggtaaaaccacctgaatttccaccagtg
attctggaacagaagggactcctggaagtgacagaccagttgaaacgtttgccttcagga
ctggactctgtgttacgaaaaactgtaccatggggagtggcatttcatcatgcaggcctt
acttttgaggagagggatgtcattgaaggagccttccgtcaagggctcattcgagtgttg
gcagcaacttctactttgtcttctggggtgaatttgcctgcacgtcgtgtgattattcgg
actcctgtttttagtggtcgaactctagatgttcttacttacaagcagatggttggtcgt
gctggcaggaagggtgtagacacaataggtgagagtatcttagtttgtaagaactctgag
aaatcaaaaggaatagctctacttcaaggatctctaaaacctgttcgtagctgtctggga
aaacaagaaggagaagaagtaactgccagtatggttcgagctattctggagataatagtt
ggcaaagtggcaagtacatcacaagatatgcagacttatgcgtcttgtacatttttggct
gcaagcatgaaagaaggaaagcaggaaattcagggaaatcaaccttctggcgagcttgga
gcaattgaggcctgtgtgatatggctcctcgaaaatgagttcatccagattacagaaacc
ggtgatggaacagaaggaaaggtgtatcatccaacacatctaggttcagctactctttct
tcttcactttctccaactgataccttagatatttttgctgacctccaaagagcaatgaag
ggctttgttttagaaaatgaccttcatattgtttatttggtaacacccatgtttgaggat
tggactactattgattggtatcgatttttctgtttatgggagaagttgccaacttctatg
aaaagggtggcagagctagtaggagttgaagaagcgttcttggctcgctgtgtgaaagga
aaagtaatagccagaacggagagacagcaccgacaaatggccatccataaaaggtttttc
acaagtcttgtgttactggatttaatcagtgaagttcccttaaaggaaattaaccagaaa
tatggatgcagtcgtggacagattcagtccttgcagcagtcagctgctgtctatgcaggg
atgattacagtattttccaaccgcctgggttggtacaacatggagcttctactctcccaa
tttcagaagcgtcttgcttttggcatccagagggagctgtgtgacctggtccgggtatcc
ttacttaatgctcagagagccaggtttctctatgcttctggctttgtcacggtggcagat
cttgctagagccactgttaccgaggtggaggtggctctgaaaaatgctgcaccttttaaa
agcacccgaaaggcagtggatgaggaagaggaggcagtcgaagaacggcggagtttgcga
actatgtgggtgtctggaagaaagggattaactgaaagggaagcagcagcccttatagtg
gaagaagctaaagtgattcttcagcaagacctagttgaaatgggagtgcagtgggagcca
tattctccattaagttctgatattcgtttgatgaacagtagtaagtcagatgtaaaagaa
catacatcccatgctaagagtttttgtaaaaaattaacatcaagaaacagaagtagtaca
agcttcagtgattcgccaactagagtacacaatttgcataaaagtagagatcaagcaaat
tccttttatggtaagttgcaggatgggaatcaagaacatgagaggcaatccgtcttcaga
gccagaaagcgggcttttttggatagagatagagagaagtcaggaaatcctttgtgtgag
gaacaaataggcaacaagaaagttgttcagacttcttcacctgacaaaattgagaagaca
tctgtgtattcaggaagttcaggcaagagcacagcttttcgaatcttgaaacctagaaag
cagctaaaacgctccagaaacagcaggcctgtggaagactctgagatgcagagaagtggt
gtgcgaggacaaactacgtccagtcctatttgtgaagattcattcaccttcaatgagaag
aatatggaatttagaagtccagggttatttcctgaaaatctatctttggatgctaaggaa
aaatgtaaaagaaaatcttttccattacaaacagagcagagttgctcaaaaaacagaaca
atatctagtggcactcctggggcatgttttgtcacaggatcccaaaggaaaaatgtgact
catcaagatgccattaatttggtaagggaacctgcaaggggatcagctgctgttgggaca
gaggaaggaaatggagtgctgaggcagagtcatccagaaaaccaaaatggttgtgtgaag
caccatgacacccttccaactaagcagtgtatggaaaagcatgctgataagcagacaaac
actgataccaaacacgaagatgcacgagagagacacatgccctgcgaggcagtcagtaat
tggacagatagagattccagtggtgctgctaccacgtgtctgaatatgaaggttaattct
gagaagacaccaagtcattttcttgcctcaggagataaaggaagcacaactgagaaaccc
agaagaatacttctgccagttggaacatttggtaagatagaccaactggagaattttctg
aattcctccagagtgcaaggaaaagctgatgtttatataactaaccaaactaaaaatgat
catgttcccaacttgggtttaattccctgtgattttgaagacagtctctacctcgatact
cagtcagagagaatgatacaacaggtgacaacagaaaatgccatgttggcagctcaaggc
aacagtctggccagacagagttcagtgacctccccgcagaatgaactggacactgccttt
tctggagagcagtgtcctccaggagcaactcggacagatcagttggacctcaagaccatc
gaggttaggaagcaaagcactggtgcacatggtattgacaaccaggctccagaaaaccac
acttgtcattctccagtactactggaagaacacaaaccttgttttaaagggaatgaactc
tctgttactgactcccaattaactagttttcttcaaggttatcaaacacaaggaactgtg
aagtcagttacagccctgtgtcctcagaagagctctcccattggtggagaaggagagagc
ccgccaactcctgaaacaagtctaaatatgagtgattgtttactgtttgatagtttcagt
gatgatggctttataaaagaacagccactggaggttccagcaaaagaatccgttctctct
gatcgaacgtcagaaaattgcagaggttgtgtgagtccacatcaagaggacctcattgaa
aaaatgaacaagagcgagaatcaaggtactcagcaatgggcggcctgtttcagcgatgaa
tctgttctattttcagaaatggattctagccagatggttgaggctttggacaatgcagac
gggttttttgtctcagaaaaagagggagctgcagtatctcttagaacattggaactggat
gatgcaggtaaggatcactgcccaagagaagtaactgaagaacaaagtgaaaaaaatccc
aagtccaggttgtttggggccaggcaaaatgactcatttttatggtcaggagcatcattt
gatttaagcccaggactgcagaggattttagataaggtgcccagtcctctagaaaaagaa
actgtgaaaacaatgactgtaaatgtgtctagtttggaaggaacaacaaagctaaatgag
aaacaagaactgatttcacatctggggacaagtcaagtacagggaatttccatttttcct
aataacgaagttgtaaataccaagggtgagccactggagtacaatgcccggcgccgtgaa
gcctcttccctcttgcctgctaaagaaggctgtgcagttgatgataatggtcttgttcct
cgtactcccatcccaacatctgcttccaagcttccattgtcagggattcttggaacatct
gtaaaacttgagaaaacacggagtgttgtaccaccatttgactcaccttcaaatataaac
cataagttaagtcctgaacatagaaacggctccaaagatgacagtcctgtgagagataca
aggttttcattgcagctgtcgcaggatgaactacagtcaactcaggactcctgcagttca
gaaagcttggccataattgacgtggcaagtgatcgaactctgtttcaaacattcattaat
gaatggcagtgcaaaaagcgattctccatctcagtggcttgtgaaaagatgagaccttct
agatctgttgccattggtggtaggtttaaacaagttgattcatctcaggaaacctctagt
ggagctgacggatttccagttccaggctgtgatgacatgctggtggttggcctggcagtg
tgctggggtggaagggatgcatattatttttcattacaaaaggaacagaagagttctgat
attttctgtaaagtggaaatgccttctcagtactgcttggctttgctagaactaaatgga
atcggctttagtactacagaatgtgagagtcagaaacatataatgcaagccaagctggat
gcgattgagactgaggcctatcaactggccggccatggtttttccttcaccagctcagat
gacatcgctgaggttttatttttggaactgaaattgccaccaaatggagatctgaaaaac
caaggcagcaaaaaaactctgggttctaccaggagagggaatgacaagggatgcaagctg
aggctgggacgacagctcagcactagtaaggatgttttaaataaattaaaggcattacat
cctttaccaggcttgatattagaatggagaagaatcactaatgctattaccaaagtggtc
tttcccctgcagcgagaaaaacgtctgaatcctattcttggaatggaaagaatctatcct
gtttcacaatcccacactgccacaggacgaatatcctttacagaaccaaatattcagaat
gtaccgagggattttgagatcaaaatgccaacactagtgggggagagcccgcctcccgca
ggccaaggcagaggcctgtttcccgagggcaggagttacacaaagacaaggatttgctac
ggaatcatttatggaatgggagctaaatctttgggagagcagatgggcgttaaagaaaac
gatgctgcttgctacattgactccttcaaatccagatacacaggaattaaccatttcatg
aaagagacagtgaagaaatgcagaagagatgggtttgttcagaccattttgggaaggcgt
agatatttgccaggaatcaaagacaacaatccttatcataaagctcacgctgagcgtcag
gcaatcaacacaacagtccaaggatcagcagctgatatagttaaaatagccacagttaac
attcagaagcaactagagaccctctgctcagccttcaaatcccacggtcaccgggagggt
atgatccaaagcaacaaaacaggactgctacccaagagaacactgcctgggatgttctgt
cccgtccgaggaggcttcttcatccttcagctccatgatgaactcctctatgaagtggca
gaagaagatgttgttcaggtagctcagatcgtcaagaatgaaatggaaaatgccataaaa
ctttctgtgaaactcaaagtgaaagtgaaaataggttccagctggggagagctgaaggac
tttgatgtgtga

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