Ochotona princeps (American pika): 101526106
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Entry
101526106 CDS
T07609
Symbol
HNRNPM
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101526106 (HNRNPM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
opi03041
]
101526106 (HNRNPM)
Spliceosome [BR:
opi03041
]
Common components
Common spliceosomal components
hnRNP proteins
101526106 (HNRNPM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNP_M_NLS
RRM_MARF1
RRM_3
RRM_occluded
RBD_DEAH11
RRM_5
Collagen_mid
Motif
Other DBs
NCBI-GeneID:
101526106
NCBI-ProteinID:
XP_004595762
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MAAGVEAAAEVAATEPKMEEESGTPGVPSGNGAPAPKSEGERPAVPEKRKEKTIKRGGSR
FEPYGNPSKRYRAFITNIPFDVKWQSLKDLVKEKVGEVTYVELLMDAEGKSRGCAVVEFK
LEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKVTATTGGMGMGPGGPGMIPIP
PSILNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKD
GKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKMDERALPKGDFFPPERPQQLPHG
LGGIGMGLGPGGQPIDANHLNKGIGMGNLGPAGIGMEGIGFGINKMGAMEGPFGGGMENM
GRFGSGVNMGRINEILSNALKRGEIIAKQGGGGGGGSVPGIERMGPGIDRIGGAGMERMG
AGLGHGMDRVGSEIERMGLVMDRMGSVERMGSGIERMGPLGLDHMASSIERMGQTMERIG
SGVERMGAGMGFGLERMAAPIDRVGQTIERMGSGVERMGLSMERMVPAGMGAGLERMGPV
MDRMATGLERMGTNSLERMGLERMGASSLERMGLERMGANSLERMGPALGAGIERMGLAM
GGGGGASFDRAIEMERGNFGGSFAGSFGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDK
FNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggggtggaagcggcggccgaggtggcggcgacggagcccaagatggaggaa
gagagcgggacgcccggcgtgccgagcggcaatggggctccggctccgaagagtgaagga
gagcggccggctgtgcccgagaagcggaaggagaaaaccataaaaaggggcggcagtcgc
ttcgagccgtacggcaacccctccaagagataccgagccttcatcacgaacatccctttc
gatgtgaagtggcagtccctgaaggacctggtgaaagaaaaagttggtgaggtaacgtac
gtggagctcttaatggacgcagaaggaaagtcaaggggctgcgctgttgtggagttcaag
ctggaagagagcatgaaaaaagccgccgaagtcctaaacaagcatagtctgagcggacgg
ccgctgaaggtcaaggaagatcctgatggtgagcatgccaggagagcaatgcaaaaggtg
acggctacgactggtgggatgggtatgggacctggtggcccaggaatgattcctatccca
cccagtatcctaaataatcccaacatcccaaatgagattatccatgcattgcaggccgga
agactcggaagcacagtatttgtagcaaatctggattataaagttggctggaagaaactg
aaggaagtgtttagcatggccggtgtggtggtccgagccgacattctggaggacaaagat
gggaaaagtcgtggcattggcactgtgacttttgagcagtcgattgaggccgtgcaagcc
atctctatgtttaatggccagctgctgtttgatagaccgatgcacgtgaaaatggacgag
cgggccctgccaaagggagatttcttccctccggagcgtccgcaacagctgccacatgga
ctcggtggtatcggcatggggttgggaccaggagggcagcctattgatgccaatcacctg
aataaaggcattggcatgggaaacctcgggcctgcaggaatcggaatggaaggcatagga
tttggaataaataaaatgggagccatggagggccccttcggcggtggcatggaaaacatg
gggcgcttcggatctggggtgaacatgggaaggatcaacgaaatcctaagtaatgctctg
aagagaggagagatcattgcaaagcagggaggaggtggaggtggaggcagtgtcccgggc
atcgaaagaatgggccccggcattgaccgcatcgggggtgctggcatggagcgcatgggc
gcaggcctgggccacggcatggatcgtgtgggctccgagattgagcgcatgggcctagtc
atggaccgcatgggctccgtggagcgcatgggctccggcatcgaacgcatgggccccttg
ggcctcgatcacatggcctccagcatcgaacgcatgggccagaccatggagcgcatcggc
tctggcgtggagcgcatgggcgccggcatgggcttcggcctggagcgcatggccgcaccc
attgaccgtgtgggccagaccattgagcgtatgggctcaggcgtggagcgcatgggcctg
agcatggagcgcatggtgcccgcgggcatgggggccggtctggagcgcatgggccccgtg
atggatcgcatggccaccggcctggagcgcatgggcaccaacagcctggagcgcatgggc
ctggagcgcatgggcgccagcagcctggagcgtatgggcctggagcgcatgggcgccaac
agcctggagcgcatgggcccagccctgggcgctggcatcgagcgcatgggcctggccatg
ggtggcggtggcggtgccagttttgaccgcgccattgagatggagcgtggcaactttggc
ggaagcttcgcaggctcctttggcgctggaggccacgcccctggggtggccaggaaggcc
tgccagatctttgtcagaaatctcccgtttgatttcacctggaagatgctaaaggacaag
ttcaatgaatgcggccacgtgctgtatgccgacatcaagatggagaacggcaagtccaag
ggctgcggcgtggtcaagttcgagtctccggaggtggccgagcgagcctgccggatgatg
aacggcatgaagctgagcggccgtgagattgatgtgcggattgaccggaacgcctga
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integrated database retrieval system
