Ochotona princeps (American pika): 101526140
Help
Entry
101526140 CDS
T07609
Symbol
CNTN6
Name
(RefSeq) contactin-6
KO
K06761
contactin 3/4/5/6
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
opi04515
]
101526140 (CNTN6)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
opi00537
]
101526140 (CNTN6)
Cell adhesion molecules [BR:
opi04515
]
Immunoglobulin superfamily
Contactins
101526140 (CNTN6)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
opi00537
]
Others
101526140 (CNTN6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
V-set_CD47
Tissue_fac
Ig_VEGFR-1-like_5th
Motif
Other DBs
NCBI-GeneID:
101526140
NCBI-ProteinID:
XP_012781273
LinkDB
All DBs
Position
9A:549863..663539
Genome browser
AA seq
904 aa
AA seq
DB search
MSYRYRLEGGSLAITSPRTEQDAGVYQCLATNLLGTILSREARLQFAYIEDFETKARSAV
SVREGQGVVLLCGRPPHVGDLFYAWTFNGNPLNTHGDNRRFISQETGNLYIAKVEPSDVG
NYTCSVTNKEARRSVRGPPSPLVQRADGVMGEYEPKIEVRFPETVPAAKDSSVKLECFAL
GNPVPDISWRRLDGSPMPGKVQLSQSQAILEIPSFQQEDEGFYECAAGNLRGRSLERIQI
ENGTLIITLLNTSDSGVYQCAAENEHQTIYANAELRVLASAPDFSKNPIKKHSVVQVGGD
ITIECRPIAFPKAAVSWRSRTESLRPSQRVILLEDGSLRIHSVTRADAGPYTCLASNQFG
TARDTGQLVVKERTVITVPPSNVDVTVGESIILPCQVSRDPSTRVAFLWAFNGNFLDLNN
GAAAHFERVGGESVGDLMIRNIQLHHSGRYLCAVQTPLESVSAGADVIVRGPPGPPEDVR
VGDISSTTAQISWNAGPDHNSPIQIFTVQARTPFSVGWQAAGTVPEILNGQTFNATVVGL
SPWVDYEFRVVAGNSIGIGEPSKPSAVLRTRASVPVLAPGSIDGGGGSRSELVVTWEPIP
EELQNGEGFGYLVMFRPVGSAAWTKAKVASVESSRFTYRNESIAPLSPFEVKVGVYNDQG
EGPLSPVSIVYSGEDEPQLAPLGTSVLSVSASEMEVSWHAIAWNRNTGRVLGYEVLYWTE
DSRERMMGKARVSGNVTAKNITGLKANTVYLASVRAYNTGGTGPSSPPVNVTTKKSPPSQ
PPANIAWKLSNSKLCLNWEHVKTMENESEVLGYKILYRQSRQSKMHILETNNTSAELLVP
FEEDYLIEIRTVSDGGDGSSSEEIRIPKMSSLSSRGIQVSGSSAHLLSTTLTAAVLLSSH
VHSE
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgagttaccgctacaggctggagggaggcagtctggccatcactagcccccgcacagag
caagatgccggtgtataccagtgcctggccaccaatctcctggggaccattctgagtcgg
gaggcaagacttcagttcgcatatattgaagacttcgagactaaagcaagaagtgctgtg
tccgtgagagaaggccagggcgtggtgctcctctgcggccgcccaccacatgttggagat
ttgttttacgcatggacattcaatggaaaccccttgaacacccacggcgacaacaggcgg
ttcatctctcaggagacgggaaacctgtacatcgccaaagtagagccatcggatgtgggc
aactacacctgctccgtcaccaacaaggaggcccggaggagcgtgcgcggcccaccgagc
cccttggtgcagcgagctgatggtgtgatgggggagtatgagccaaagattgaagtgcgt
ttccctgagactgtcccagctgcaaaggactcgtctgtaaaactggaatgctttgccctt
ggaaatccagtccctgacattagctggaggaggttggatggaagcccgatgccaggcaaa
gtccagctgagccagtcccaagcgatcctggaaatccccagcttccagcaggaagacgag
ggcttctacgagtgtgcggcaggcaacctgcgaggaaggagcctggagagaattcaaata
gaaaacgggacactcatcatcaccctgctgaacacgtccgactctggtgtctaccagtgt
gctgctgaaaacgagcatcagacaatctatgcaaacgccgaactgagagttctagcgtca
gctcctgatttctcaaaaaatcccatcaagaaacactcagttgttcaagttggtggggac
atcaccatcgaatgcaggccgatcgcttttcccaaagcagctgtgtcctggagaagcagg
acagagagcctgaggccgagccagagggtgattctcctggaggacggcagcctcaggata
cacagtgtcacccgggccgacgctgggccgtacacatgcctggcctcaaaccagtttggc
actgccagggacactggccagctggttgttaaagagaggactgtcatcacagtgccacct
tccaacgtggacgtcaccgtgggggagagcatcatcctgccctgccaggtgtcccgcgac
ccgtccactcgagtggcctttctgtgggctttcaatggcaacttcctagacctgaacaac
ggcgcggccgcccactttgaaagggttggaggtgaatctgttggggacttgatgatccgg
aacattcagctccaccactccgggaggtacctgtgcgcagtacagacacccctggaaagc
gtgtcggcgggagcagacgtcatcgtcagaggccccccaggtcctccggaggacgtgcgc
gtgggagacatctccagcaccactgcccagatcagctggaatgcaggcccggaccacaac
agccccatccagatattcaccgtgcaggcacgaacgcccttttccgtgggctggcaggct
gcggggacagtcccagaaatcctcaatgggcagacattcaacgccacggtggtgggcctg
agtccctgggtggactatgaattccgagtggttgccgggaacagcattgggattggagaa
ccgagcaagccatccgcagtgttaaggacgcgagcatcagtgcctgtgctggctccagga
agcattgatggcggaggcggaagccggtctgagctcgtcgtcacgtgggagcccattcca
gaggaactacagaatggagagggatttggctacctggtcatgttccggccagtgggctca
gcagcttggaccaaggccaaagtggcatccgtagagtcctccaggttcacctacagaaac
gagagcatcgctcccctgtctccctttgaagtcaaggtgggcgtgtacaatgaccagggg
gaaggaccgctgagccctgtgtccatcgtctactctggggaggatgaaccccagctggct
cccctgggaacttctgtcctgagtgtctctgcttctgaaatggaggtctcatggcatgcc
atcgcctggaacagaaacacaggacgtgtgctgggctatgaggtcttatactggacagaa
gactcaagagaacgcatgatgggtaaagcgagagtcagtggaaatgtcacggccaagaac
atcacggggctcaaggcgaacactgtctaccttgcttccgtgagggcctacaacactggt
ggcacgggtccctccagccccccagtcaacgtcaccaccaagaagtctcctcccagccaa
ccaccagcaaacattgcctggaagctgtcaaactctaaattgtgcttgaattgggagcat
gtaaaaaccatggaaaatgaatcggaagtgttaggctataagattctctacaggcaaagc
agacagagcaagatgcatattttggaaacgaataacacgtcggcggagcttctggttccc
tttgaagaggattacctgattgaaataagaacagtcagtgatgggggtgatgggagcagc
agtgaggagatcaggatccccaagatgtccagtttgagctccagaggaattcaagtctca
gggtccagtgcccatctgctgtccactaccctgactgccgctgttttactttccagccac
gtacacagtgaatga
DBGET
integrated database retrieval system
