Ochotona princeps (American pika): 101526472
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Entry
101526472 CDS
T07609
Name
(RefSeq) LOW QUALITY PROTEIN: interferon-induced protein with tetratricopeptide repeats 5
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
opi03016
]
101526472
Transfer RNA biogenesis [BR:
opi03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
101526472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_14
TPR_12
TPR_19
TPR_8
TPR_17
TPR_11
TPR_16
TPR_CcmH_CycH
TPR_7
TPR_10
TPR_Slam
ANAPC3
TPR_15
TPR_MalT
ARM_TT21_C
TPR_NPHP3
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
DUF7656
Motif
Other DBs
NCBI-GeneID:
101526472
NCBI-ProteinID:
XP_004600146
LinkDB
All DBs
Position
18:55832704..55834169
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AA seq
487 aa
AA seq
DB search
MDFVFDSEISKDFLKAILLELECHFTWNLLKEDIDLHDVEDSIGQQLEFLTSKSRLALHN
LLAYVKHLKGQSKDALKCLEKAEDVIQKEHPAEKEVCSLVIWGNYAWVSYHIDQFEDAQK
YIDRVRNVCRKLSSPSNYKLEHPKIDCEKGWALLKFGGKYYQRAKAAFEKALEAEPDNAE
FNVGYALTVYRLDDFDREGPVKSFSLGPLRKAVALNPGNTYIKVFLALKLQDVHAEAEGE
GYIEEILNQTTSRPYVLHYAAKFYRRKKSWDKALELLKEALEVTPSSPFLHHQMGLCYRA
QMIQIKKATHNRPKGKNKLKVDELIQSAIFHFRVAVEQDSMFVFAYMDLANMYAEGGQYS
NAEDIFQKALHLEHIIDDHKQQIHYQYGCFHEFHCKSEYAAIHCYLEALKVKGRPSLHMK
ETSALKKLATKRLYHNALDVLSLSALGFVYKLEGETRRAIEYYQKSLKIDPENEEFLTAV
CELQLSI
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtctttgacagtgaaatttccaaagatttcttgaaggccatactgttggaa
ttagaatgtcactttacatggaatttgcttaaggaagacattgacctacatgatgtggaa
gactcaattgggcagcagcttgaatttcttacctcaaaatccaggcttgctcttcataac
ttactggcatatgtgaaacacctaaaaggacaaagtaaggatgccctcaagtgcttggaa
aaagcagaagatgtaatccaaaaagaacacccagctgaaaaggaagtgtgtagtctggtc
atttggggaaactatgcttgggtgtcttatcacatagaccagtttgaagatgctcagaag
tatatagacagggtaagaaatgtctgcagaaaattatccagtccttctaactataaattg
gagcatcccaaaattgactgtgagaaaggatgggcacttttgaaatttggaggaaagtat
taccaaagggctaaagcagcttttgagaaagctttggaagcagaacctgacaatgcggag
tttaatgtaggctatgccctcaccgtgtaccggctggacgattttgacagagaagggcct
gtgaagagcttttctctgggacccctgaggaaagctgttgcccttaacccagggaacacc
tacatcaaggttttcctggcactaaagcttcaagatgtacatgcagaagctgaaggggaa
gggtacattgaagaaatcctgaaccaaacaacatctcggccttatgtccttcattatgca
gcgaaattctacaggagaaaaaagtcctgggacaaagctctcgaacttttgaaggaggcc
ttggaggtgacaccatcctcacctttcctgcatcaccagatgggactttgctacagggca
cagatgatccaaatcaagaaggccacccacaacagacctaagggaaagaataaactgaag
gtagatgagctgattcagtctgctatatttcatttcagggtggctgtggagcaagactct
atgtttgtgtttgcctacatggacctggccaacatgtatgctgaaggggggcagtacagc
aatgctgaagacattttccagaaagccctccatctggagcacatcatcgatgatcacaaa
cagcagatccactaccaatatggctgctttcacgagtttcactgtaaatctgagtatgcg
gccatccattgctatttagaagccttaaaggtcaaaggcagaccatccctgcatatgaaa
gagaccagtgctctgaagaaattggctaccaagagactttatcacaatgctctggacgta
ctgagtttaagtgccctaggatttgtttacaagcttgagggagaaacgaggcgagccatt
gagtattaccagaagtccctaaagatagatccagaaaatgaagaattccttactgctgtc
tgtgagcttcaactttccatctaa
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