Ochotona princeps (American pika): 101526579
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Entry
101526579 CDS
T07609
Symbol
POU2F1
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
opi
Ochotona princeps (American pika)
Pathway
opi05168
Herpes simplex virus 1 infection
opi05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
101526579 (POU2F1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
101526579 (POU2F1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101526579 (POU2F1)
03021 Transcription machinery [BR:
opi03021
]
101526579 (POU2F1)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
101526579 (POU2F1)
Transcription machinery [BR:
opi03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
101526579 (POU2F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
101526579
NCBI-ProteinID:
XP_004589210
LinkDB
All DBs
Position
13:127048628..127198017
Genome browser
AA seq
757 aa
AA seq
DB search
MLDCSDYVLDSRMNNPSESSKPSMESGDGNTGTQTNGLDFEKQPVPVGSAISTAQAQAFL
GHLHQVQLAGTSLQAAAQSLNVQSKSNEESGDSQQPSQPSQQPSVQTTIPQTQLMLAGGQ
ITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASAATPMTQIPLSQ
PIQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQL
PQQSQASLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQSTPKRIDTPSLEEPSDLEEL
EQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEK
WLNDAENLSSDSALSSPSALNSPGQGVEGLNRRRKKRTSIETNIRVALEKSFLENQKPTS
EEISMIAEQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPNPTSLVATTPS
LVTSSAATTLTVNPVLPLASAAVTNLPVTGTTDTTSNNTATVISTAPPASSAVTSPSLSP
SPSASASTSEASSASETSTTHTTSAPLSSPLGTSQVMVTASGLQTAAAAALQGATQLPAN
ASLAAMAAAAGLSPGLMAPSQFAAGGALLSLNPGTLGGALSPALMSNSTLATIQALASGG
SLPITSLDATGNLVFANAGGAPNIVTAPLFLNPQNLSLLTSNPVSLVSAAAASTGNSAPV
ASLHATSTSAESIQNSLFTAASASGAAATTTTASKAQ
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgctggactgcagtgactatgttctagactcaagaatgaacaatccatcagaaagcagt
aaaccatctatggagagtggagatggcaacactggcacgcaaaccaatggtctggacttt
gagaagcagccagtgcctgtgggaagtgcaatctcaacagcgcaagcccaggctttcctt
ggacatctccatcaggttcagcttgctggaacaagtttacaggctgctgctcagtcttta
aatgtacagtccaaatctaatgaagaatccggggattcccagcagccaagccagccttcc
cagcagccttcagtgcagacaaccattccccagacccagcttatgctggctggaggacag
ataaccgggctcactctgacgccagcccagcaacagctactactgcagcaggcccaggcc
caggcccagctgctggctgctgcagtgcagcagcattctgccagccaacagcacagtgct
gctggggccaccatctccgcctccgccgccacgcccatgacgcagatccccctctcgcag
cccatccagatcgcccaggatcttcaacaactacaacaactacagcagcagaatctcaac
ctgcagcagtttgtgttggtacatccgacaaccaacttgcaaccagcacagttcatcatc
tcacagacgccccagggccagcagggtctcctgcaagcgcaaaatcttttaacacaacta
cctcagcaaagccaagccagcctcctgcagtcgcagccaagcatcactctcacgtcccag
ccagcaaccccgacacgcacaatagcagcaaccccaattcagacccttccacagagccag
tcaacaccaaagcgaattgatacccccagcttggaggagcccagtgacctggaggagctg
gagcagtttgccaagactttcaaacaaagacgaatcaaacttggattcactcagggtgat
gtcgggctcgctatgggtaaactgtatggaaatgacttcagccaaactaccatctctcgc
tttgaagccttgaacctcagcttcaagaacatgtgcaaattaaagccacttttagagaag
tggctaaatgatgcagagaacctctcatcggattcggcgctctccagcccaagtgccctg
aactctccagggcagggagttgagggtttgaaccgtaggaggaagaaacgcaccagcata
gagaccaacatccgtgtggccttagagaagagtttcttggagaatcaaaagcctacctcg
gaagagatcagcatgattgctgagcagctcaacatggagaaggaggtgattcgtgtttgg
ttctgtaaccgccgccagaaggagaaaagaatcaacccacccagcagtggtgggaccagc
agctcccccatcaaagcaatttttcccaacccaacttcactggtggctaccacgccgagc
cttgtgacaagcagtgcagcgaccaccctcaccgttaaccccgtgctccccctcgccagc
gccgcagtgaccaatctccctgttacaggcactacagacacaacctctaacaacacagcc
accgtgatttccacagcccctcccgcgtcctcggcagtcacctccccctcgctgagcccc
tccccttccgcctcagcctccacctccgaggcgtccagtgccagtgagaccagcacaacg
cacaccacctctgctcctctgtcctcccctcttgggaccagccaggtgatggtgacagca
tcaggcttgcaaacggcagcagctgccgccctccaaggagctacacagttgcctgcaaat
gccagtcttgctgccatggctgctgctgcaggactcagcccaggcctgatggcaccctca
cagtttgcggctggaggtgccttactcagtctcaatccagggaccctgggtggtgctctc
agcccagctctgatgagcaacagtacactggcaactattcaagctctggcttctggtggc
tcccttccaataacgtcactggatgcaactgggaacctggtatttgccaatgcaggagga
gcccccaacatcgtgactgcccctctgttcctgaaccctcagaacctctctctgctcacc
agcaacccggttagcttggtctctgccgccgccgcatccacagggaactccgcacctgtt
gccagccttcacgccacctcaacctcagctgagtccatccagaactctctcttcacagct
gcctctgccagtggggcagctgccaccaccaccaccgcctccaaggcacagtga
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