Ochotona princeps (American pika): 101526673
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Entry
101526673 CDS
T07609
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X6
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101526673 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101526673 (FIP1L1)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101526673 (FIP1L1)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
101526673
NCBI-ProteinID:
XP_004590932
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Position
15:complement(85253455..85301472)
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AA seq
580 aa
AA seq
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MSAGEVDRLVSELSGGTGGDEEEEWLYGGPWDVQVHSDLTKDLDENEVERPEEENTSANP
PSGIEEEAAENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNL
NIKTGGRVYGSTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGF
NEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITVQQGRTGNSEKEAPLPPAKAEFTSPPSL
FKTGVPPSRNSSSSQAQPSAASRKAASNVGKWQDRYGRAESPDLRRLPGAIDVIGQTITI
SRVEGRRRANENSNIQVLSDRSAAEVDNNFNKPPPFFPPGAPPTHLPPPPFLPPPPTVST
APPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRSARAFPYGNVAFPHL
PGSAPSWPSLVDTSKQWDYYARREKDRDRERDRDRERERDRDRERERTREREREREHSPT
PSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHREKEETRHKSSRSNSRRRHES
EEGDTHRRHKHKKSKRSKEGKEAGGEPAPEQEGAEPAPAE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtggaccgcctggtgtcggagctgagcggcgggaccggaggggat
gaggaggaagagtggctgtatggcggcccctgggacgtgcaggtgcacagcgacttgacc
aaggacctagatgaaaatgaagtggagaggccagaagaagaaaataccagtgccaatcct
ccgtcggggattgaagaagaagctgcggagaatggtgtgcccaaaccgaaagtgaccgag
acagaagatgatagtgacagtgacagtgatgacgatgaggacgatgtccacgtcaccatc
ggagacattaagacaggagcaccgcagtatgggagttatggtacagcacctgtgaatctt
aatatcaaaacaggaggaagagtttacggaagtacaggaacaaaagtcaaaggggtggac
ctggacgcaccagggagcatcaatggagtccctctcttagaggtagacttggattctttt
gaagataaaccatggcgtaaacccggtgctgatctttctgattattttaattatgggttc
aatgaagatacttggaaagcttactgtgagaaacaaaagaggatacgaatgggacttgaa
gttataccagttacctctactactaataaaattacggtacagcagggaagaactggaaat
tcagagaaagaagcacctcttccacctgccaaagccgagttcacttctcctccctctttg
ttcaagactggggtccctccgagcaggaacagctcctcgtctcaggctcagccgagtgct
gcttccaggaaagccgcttccaacgtcggcaagtggcaggaccgctacgggcgggccgag
tcaccggatctgaggagattgcctggagcgatcgatgttattgggcaaaccataactatc
agccgagtagaaggaagacggcgagctaatgaaaacagcaacatacaggtcctttctgac
agatctgctgctgaagtagacaacaacttcaacaagccacctccatttttccctccagga
gctcctcccacccaccttcccccacctcccttcctcccgcctcctcccactgtcagcacc
gcgccgccgctgattccaccaccaggtattccaataactgtaccacctccaggttttcct
ccaccaccaggcgctccgcccccatctctcatcccgacgatagaaagtgggcactcttct
ggttatgacagtcgctctgcacgggcattcccttatggcaatgttgcctttccgcatctt
cctggctccgctccttcatggcctagtcttgtggataccagcaagcagtgggactactac
gcaagaagagagaaagaccgtgaccgagaaagagaccgtgaccgtgagcgagaacgggat
cgggaccgagagcgtgagcgcaccagagagagggagagggagcgagagcacagccccacg
cccagcgtcttcaacagtgacgaggagcgctacagatacagggagtacgccgagcgaggc
tacgagcggcaccgagcgagtcgtgagaaggaggagcggcaccgggagaggcggcaccgg
gagaaggaggagaccagacacaagtcgtcccgaagcaacagtagacgtcgccatgaaagt
gaagaaggggacactcacaggagacacaagcacaaaaagtcgaagcgcagcaaggaaggg
aaggaggccggtggcgagcccgccccggagcaggagggcgctgagcccgcgcctgccgag
tag
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