Ochotona princeps (American pika): 101526684
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Entry
101526684 CDS
T07609
Symbol
TAF1
Name
(RefSeq) transcription initiation factor TFIID subunit 1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101526684 (TAF1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
opi01001
]
101526684 (TAF1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opi03021
]
101526684 (TAF1)
03036 Chromosome and associated proteins [BR:
opi03036
]
101526684 (TAF1)
Enzymes [BR:
opi01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
101526684 (TAF1)
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
101526684 (TAF1)
Protein kinases [BR:
opi01001
]
Serine/threonine kinases: Other
TAF1 family
101526684 (TAF1)
Transcription machinery [BR:
opi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101526684 (TAF1)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
101526684 (TAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
Cac1_C
Opi1
Motif
Other DBs
NCBI-GeneID:
101526684
NCBI-ProteinID:
XP_012785271
LinkDB
All DBs
Position
X
Genome browser
AA seq
1757 aa
AA seq
DB search
MSDTDSDDDSTGGGPFSLAGFLFGNINGAGQLEGESVLDDECKKHLAGLGALGLGSLITE
LTANEELSGSDGALVNDEGWIRSTEDAVDYSDINEVAEDESRRHQQAMGSLQPLCHPDYD
EDDYDADCEDIDCKLMPPPPPPLGPVKKEKDQDAITGVSEDGEGIILPSIIAPSSLASEK
VEFSSSSDSESEMGPQEAAQAESDDGKLTLPLAGIMQHDATKLLPSVTELFPEFRPGKVL
RFLRLFGPGKNVPSVWRSARRKRKKKHRELIQEEQIQETECSVESEVEQKCLWDYDYAPP
PPPEQCLSDDEITMMAPVESKFSQATGDIDKVTDTKPRVAEWRYGPARLWYDMLGVPEDG
SGFDYGFKLKKTEHEPVMKCRVVEDLKKLEENNTTDLLADENFLMVTQLHWEDDIIWDGE
DVKHKGTKPQRASLAGWLPSSMTRNAMAYNVQQGFTATLDDDKPWYSIFPIDNEDLVYGR
WEDNIIWDAQAMPRLLEPPVLTLDPNDENLILEIPDEKEEATSNSPSKESKKESSLKKSR
ILLGKTGVIKEEPQQNMSQPEVKDPWNLSNDEYYYPKQQGLRGTFGGNIIQHSIPAVELR
QPFFPTHMGPIKLRQFHRPPLKKYSFGALSQPGPHSVQPLLKHIKKKAKKPGKDPGAPDC
KYGETVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYYIRELV
DIFVVGQQCPLFEVPGPNSKRANTHIRDFLQVFIYRLFWKSKDRPRRIRMEDIKKAFPSH
SESSIRKRLKLCADFKRTGMDSNWWVLKSDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQR
LKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPT
GCGEGFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEI
KKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVL
SSTEVLSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLLAAG
SAASGNSHRDDDTASVTSLNSSATGRCLKIYRTFRDEEGKEYVRCETVRKPSVIDAYVRI
RTTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKMKER
PDLKPNSLIPNVKLSADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNKPHKSIHRR
RTDPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKR
LYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINP
LLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNI
SKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTEYDEHLTQLEKD
ICTAKEAALEEAELESLDPMTPGPYTPQAKPPDLYDTSTSLSMSRDASVYQDESNISVLD
IPTATAEKPVIQESENGDGDLADEEERTVQHSQASVLYEDLLMSEGEDDEEDAGSDEEGD
NPFSAIQLSESGSDSDVGSGGLRPKQPRVLQENTRMGMENEESMMSYEGDGGEASHGLED
SNISYGSYEEPDPKSNTQDTSFSSIGGYEVSEEEDEEEEEEQRSGPSVLSQVHLSEDEED
SEEFHSNAGDSDLDSDE
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacacggacagcgatgatgattctactggaggcggcccgttttctttagccggt
ttccttttcggcaacataaatggagccgggcagctggagggagaaagcgtcttggatgat
gagtgcaaaaagcacctggcaggcctgggggcactgggccttggcagcctcatcaccgaa
ctcactgcaaatgaagaattgtctggaagtgatggtgctttggtaaatgatgaaggatgg
attaggagtacggaagatgctgtagattactctgacatcaacgaagtggcagaagatgaa
agccgaagacatcagcaggcaatggggagcttgcagcccctttgccatccagattatgat
gaagatgactatgatgctgattgtgaagacattgactgcaagttgatgcctccaccacca
ccacccctaggacccgtaaagaaggagaaggatcaggatgctattactggtgtgtcagaa
gatggagaaggcatcatcttgccctccatcattgccccttcctctttggcctcagagaaa
gtggagttcagtagttcctctgactcagaatctgagatgggacctcaagaagcagcacag
gcagaatctgacgatggaaagctgaccctcccattggccgggattatgcagcatgacgcc
accaagctgttgccgagtgttacagaactttttccagagtttcggcctggaaaggtttta
cgcttccttcggctttttggaccaggaaaaaatgtcccatctgtttggcggagtgctcgg
agaaagaggaaaaaaaagcaccgggagctgatacaagaagagcagatccaagagacagag
tgctcagtagaatcagaagttgagcagaagtgtttatgggactatgactacgctccgcca
ccacctccagagcagtgtctttctgatgatgaaatcacaatgatggctcctgtggagtcc
aagttttctcaggcaactggagatatagataaagtaacagataccaaaccaagagtggct
gagtggcgttatgggcctgctcgcctgtggtatgatatgctgggtgtccctgaagatggc
agtggatttgactatggtttcaaattgaagaagactgaacatgaacctgtgatgaaatgt
agagtggtggaggacttgaaaaaacttgaggaaaacaatactactgatcttctggctgat
gaaaacttcctgatggtgacccagctgcattgggaagatgacatcatctgggatggggag
gatgtcaaacacaaagggacaaagcctcagcgtgcaagcttggcaggctggcttccttcc
agcatgactaggaatgccatggcttacaatgttcagcaaggttttacagctactctggat
gatgacaaaccttggtactctatttttcccattgacaatgaagatttggtatatggacgc
tgggaggacaatattatttgggatgctcaggccatgccccggctgttagagcctcctgtt
ttgacactcgaccccaatgatgaaaatctcattttggagattcctgatgagaaggaagag
gctacctctaattccccttccaaggaaagtaagaaagaatcatctctgaagaagagccga
atccttttagggaaaactggagtcatcaaggaggaaccacagcagaacatgtctcagcca
gaagtgaaagatccgtggaatctctccaatgatgaatattactatcctaaacaacaaggt
cttcgaggcacttttggaggaaatattattcagcactcaattcctgctgtggaattacgg
cagcccttctttcctacccatatggggcctatcaaactgcgacagttccatcgtccacct
ttgaaaaagtactcctttggagcactgtctcagccaggtccccactcagtccaacctttg
ctgaagcacatcaaaaagaaggccaagaaacctggaaaagatcctggagccccagattgt
aaatatggggaaactgtttactgccatacatctcctttcctgggctctctccatcctggc
caattattgcaggcctttgagaacaacctttttcgtgctccaatttatcttcataaaatg
ccagaaactgacttcttgatcattcgaacaaggcagggttattatattcgggaattagtg
gatatttttgtggttggccagcagtgccccttgtttgaagttcctggacctaactccaaa
agggccaatacacatattcgagactttctacaggtctttatataccgcctgttctggaaa
agcaaagatcgaccacggcggatccgaatggaagatataaaaaaagcttttccttcccat
tcagaaagcagcatccggaagaggttaaagctttgtgccgacttcaaacgcacaggcatg
gactccaattggtgggtgttgaagtctgattttcgtttaccaaccgaagaggagattaga
gctatggtgtcaccagagcagtgctgtgcttactatagcatgatagctgcagagcagcgg
ctgaaggatgctggctatggtgagaagtctttttttgctccagaagaagaaaatgaagaa
gatttccagatgaaaattgatgatgaggttcgcactgctccttggaatacaactagggca
ttcattgctgctatgaagggcaagtgtcttctggaggtcactggggtggcagatcccaca
ggatgtggtgaaggattctcctatgtgaagattccaaacaaaccaacacaacagaaggat
gataaggagcctcagccagtgaagaagacagtgacaggaacagatgcagaccttcgtcgc
ctttctctgaaaaatgccaagcagcttctgcgtaaatttggtgtgccagaagaagagatt
aaaaagttgtcccgctgggaagtgattgatgtggtgcgcacaatgtcaacagaacaggcc
cgttctggagaaggacccatgagtaaatttgcccgtggatcaaggttttctgtggctgag
catcaagagcgttataaagaggaatgtcagcgcatctttgacctgcagaacaaagttttg
tcttcaaccgaagttttatcaactgacacagacagcagctcagctgaagacagtgacttt
gaagaaatggggaaaaacattgaaaacatgttacagaacaagaaaactagctctcagctg
tcacgtgaacgggaggagcaggagcggaaagaacttcagaggatgctactggcagcaggc
tcagcagcatcaggaaacagccacagagatgatgacacagcttctgtgactagcctaaac
tcttctgccactggtcgttgcctcaagatttatcgtacatttcgagatgaagaaggaaaa
gaatatgtgcgctgtgagactgtccgaaaaccatctgtcattgatgcatatgtgcgcata
cggaccacgaaagatgaagaattcattcgaaaatttgccctttttgatgaacagcatcga
gaagagatgcgaaaagaacggcggaggattcaagagcaacttaggcgccttaagaggaac
caggagaaggagaagcttaagggtcctcctgagaaaaagcccaaaaaaatgaaggagcgt
cctgatctaaaacctaattctcttattccaaatgtgaaactaagcgcggatgaggttcgc
agaaagtcactggttctgaagttccctaaacagcagcttcctcccaagaagaaacggcgg
gttggaaccactgttcactgtgactatctgaataaacctcataagtccatccaccggcgc
cggacagatcctatggtgacattgtcatccatcttggagtcgatcataaatgacatgaga
gatcttccaaatacctacccttttcacactccagtcaatgccaaagttgtgaaggattac
tacaaaatcatcactcgaccaatggacctacaaacactccgtgaaaatgtacgcaaacgc
ctctacccatctagggaagaattcagagagcatttggagctaattgtgaaaaatagtgcc
acctataatgggccaaagcactcattgacccagatatctcagtccatgctggatctctgt
gatgagaaactcaaagagaaagaagacaaattagctcgcttagagaaagctatcaatccc
ttgctggatgatgatgatcaagtggcgttttccttcattctggacaacattgtcacacag
aaaatgatggcagttccagattcttggccatttcatcacccagttaataagaagtttgtt
ccagattactacaaagtgattgtaaacccaatggatctcgaaactattcgtaaaaatatc
tccaaacacaagtaccagagtcgggagagctttctagacgacgtaaaccttattctggca
aatagtgttaagtataatgggcccgagagtcagtatactaagactgctcaggaaattgtg
aacgtctgttaccagacattgactgagtatgatgagcacttgactcaacttgagaaggat
atttgtacggctaaagaagcagctttggaggaagcagaattagaaagcctggaccctatg
actcctgggccctacacacctcaggctaagcctcctgatttgtatgataccagcacatcc
ctcagtatgtctcgagatgcctctgtatatcaagatgagagcaatatttctgtcctggat
attcccactgccactgcagaaaagccagtaattcaggaatctgaaaatggagatggcgat
cttgcagatgaagaggagagaactgtgcaacactctcaagccagtgtcctatatgaggat
ttgcttatgtctgaaggagaagatgatgaggaagatgctggaagtgatgaggaaggagat
aatcctttctctgctatccagctgagtgagagtggaagtgactctgatgtgggatctggt
ggtttaagacctaaacagccccgtgtgcttcaggagaacacaagaatgggcatggaaaat
gaagaaagcatgatgtcctatgagggagacggtggggaggcttcccatggtttggaggat
agcaacatcagttatgggagctatgaggagcctgaccccaagtcgaacacccaagacaca
agcttcagcagcatcggtgggtatgaggtatcagaggaggaagacgaggaggaggaggaa
gagcagcgctctgggccgagtgtactaagccaggtccacctctcagaggacgaggaggac
agtgaggagttccactccaatgctggggacagtgacttggactctgatgaatga
DBGET
integrated database retrieval system
