Ochotona princeps (American pika): 101526741
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Entry
101526741 CDS
T07609
Symbol
RSF1
Name
(RefSeq) remodeling and spacing factor 1
KO
K11657
remodeling and spacing factor 1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101526741 (RSF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101526741 (RSF1)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
101526741 (RSF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHIM1
PHD
WSD
Motif
Other DBs
NCBI-GeneID:
101526741
NCBI-ProteinID:
XP_004589915
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Position
1:54382964..54502847
Genome browser
AA seq
1441 aa
AA seq
DB search
MATAAAAAAAAAAMAPPGCPGSCPNFAVVCSFLERYGPLLDLPELPFPELERVLQAPPPD
VGHGEVPKELVELHLKLMRKIGKSVTADRWEKYLIKICQEFNSTWAWEMEKKGYLEMSVE
CKLALLKYLCECQFDDNLKFKNIINEEDADTMRLQPIGRDKDGLMYWYQLDQDHNVRMYI
EEQDDQDGSSWKCIVRNRNELAETLALLKAQIDPVLLKNSSQQDTSSRESPSLEDEETKK
EEETPKQEEQKEGGKMRGEEQPAKPENHPATNIVEETTVNIEREDEKDLVKLPVIVKLEK
SPPEVEEKKMIKEESDSFKENVKPMKVEINDSRADPKDTKGNPEKLVPQEPERFEFSCNV
KCSQDITEKSPEETEKLKNDQQAKIPLKKREIKLSDDFDSPVKGTLCKSVTPTKEFLKDE
IKQEEETCKRVSTITTLCHEGKQMVNGEVSDEKVTANVKAEHIEAKFCETKEDVHSSPSK
DRSVIMEGNGTETLSSVITNMKTGEQEKEGAPAGKDTGGAMAGPETQNQKGQIKEPGQPT
METSLESSELAKALSVTGALSTTESCTTKAEDRSLKAKTDTRPPVMECLEKSEKFKRTLL
DKDLQRLSPIPEEVPRSTLESEKLGSPGKAETSPSEATSHCDQIALENQGAESQNKSPVG
GCSLEKTDALKEVSESMKVEMDNPDNAQTSGIEEPSEPKGSMHKSKFKYKLVPEEENSAT
ENTEITSERQKEGIKLTIRISSRKKKTESPPKILELGQKQEKTEKEEEKANMGRTLRRSP
RISRPTAKVAEIRDQKADKKRGEGEDEVEEESAASQKPDRKENQKKMEKDTNSKISKVKP
KGKVRWTGSRTRGRWKYSSNDESEGSDSEKSSAASEEEEEKESEEAIVADDDEPCKKCGL
PNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPCQHKLLCEKLEEQLQDLDVALK
KKERAERRKERLVYVGISIENIIPPQEPDFSEDQEEKKKDSKKTKVNLLERRSTRTRKCI
SYRFDEFDEAIDEAIEDDIKEADGGGVGRGKDISTITGHRGKDISTILDEERKENKRPQR
AAAARRKKRRRLNDLDSDSNLDEEESEDEFKISDGSQDEFVVSDENPDESEEDPPSNDDS
DTDFCSRRLRRHSSRPMRQSRRLRRKIPKKKYSDDDEEEESEENSRDSESDFSDDFSDDF
VETRRRRSRRNQKRQINYKEDSESDGSQKSIRRGKEIRRIHKRRLSSSESEESYMSKNSE
DGELAKGSKRSARKRGRSTDEYSEAEEDEEEEGRPSRKRLHRIETDEEENCDNAHGAAEP
PARAGQSRILPSEHEGTKKPYRIESDGEEDFENVGKVGSPLDYSLVDLPSTNGQSPGKAI
ENLIGKPAEKPLTPKDNSTASASLAPNGTSGGQEAGAPEEEEDELLRVTDLVDYVCNSEQ
L
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggcggcagcggcagcggcggcggcggcgatggctcctccgggctgccca
ggttcgtgccccaacttcgccgtggtctgctccttcttggagcgctacgggccgctgctg
gacctgcctgagctgccgttccccgagctggagcgggtgctgcaggcgccgccgccggac
gtcggccacggagaagtaccaaaggaattggtggaactccatttgaagttgatgaggaag
attggcaaatctgttacagcagacagatgggaaaaatatttgatcaagatatgccaagaa
tttaacagcacctgggcttgggagatggagaagaagggctatcttgaaatgagtgttgaa
tgtaaattagcactcttaaagtatctctgcgagtgtcagtttgatgacaatcttaaattc
aagaacattattaatgaggaggatgctgatactatgcgtctccaaccaattgggcgagac
aaagatggcctaatgtactggtaccagttggatcaggatcacaatgtcagaatgtacata
gaagaacaagatgatcaagatggctcttcatggaaatgcattgtcagaaatcgaaacgaa
ttggctgagacccttgcactgctgaaagcacagattgatcctgtactgttgaaaaactct
agccagcaggacacctcttcccgggagagtcccagcctagaggatgaggagactaaaaag
gaagaagaaacacctaaacaagaggaacagaaggaaggcggaaagatgagaggtgaagag
cagccggcaaaaccagaaaaccatcctgctaccaatattgtagaggagactactgtgaat
atagaaagggaagatgaaaaggatcttgtgaaactgccagttatagtcaagctagaaaaa
tctccgccagaagttgaagaaaaaaaaatgatcaaagaagaaagtgattctttcaaggaa
aatgtcaaacccatgaaagttgaaataaatgactccagagcagaccctaaagataccaaa
ggcaacccagagaagctggtaccacaggagcctgagaggttcgaattcagttgtaacgtt
aagtgttctcaagacattacagagaaatctcctgaggagacagagaagcttaaaaatgac
cagcaggccaagataccactaaaaaaaagagaaatcaaactgagtgatgactttgacagt
ccagtgaaaggaactttgtgtaaatccgttactccaacaaaagagtttttgaaagatgaa
ataaaacaggaagaggagacttgtaaaagggtttctacaatcaccactctgtgtcatgaa
gggaagcaaatggtaaatggagaagtgagtgatgaaaaggtaactgcaaatgttaaggca
gagcacattgaagccaagttctgtgaaacaaaggaagatgtgcacagtagcccctctaag
gacagaagtgtcatcatggagggaaatggaacagagaccctaagttctgtcatcaccaat
atgaaaacaggagagcaagagaaagaaggggcccctgcaggaaaagacacaggaggtgcc
atggcaggcccagagacccagaatcaaaaagggcaaataaaagagcctggtcagccgaca
atggaaacctctcttgagtcttccgagttggcaaaagctctctctgtaacaggtgcttta
tctaccactgagtcatgtaccacaaaagcggaagacaggtctcttaaggctaagacagat
acccgtccacctgtcatggagtgtcttgaaaagtcagagaagttcaaaaggactcttctt
gataaggatttgcagagactgagtcctataccagaggaagttccgaggagtactctagaa
tcagaaaaactgggctctccaggcaaagctgaaacttcaccatctgaggccacatcacac
tgtgaccaaatagcccttgaaaatcaaggggcagaaagccagaataaaagtcctgttggg
ggttgttctctggaaaagacagatgctcttaaagaggtttcagaatccatgaaggtggaa
atggataatccggacaatgcccagacctctggcatagaggagccttctgaaccgaaaggt
tctatgcataaaagcaaattcaagtataagttggttcctgaagaagaaaacagtgccaca
gaaaatacagagataacctctgaaaggcagaaagagggcatcaagttaacaattaggata
tcaagtcgaaagaagaagacggagtctcctcccaaaattctagaactaggacaaaagcaa
gagaagacagaaaaggaagaagagaaggcaaatatgggtcgtacgttaaggaggtctcca
agaatatctaggcctacagcaaaagtggccgaaatcagggaccagaaagctgataaaaaa
agaggggagggagaagatgaagtagaagaagagtcagcagcttcacaaaaaccagacaga
aaagaaaaccagaaaaaaatggagaaagatacaaattctaaaataagcaaggtaaaaccg
aaaggcaaagttcgatggactggttcgcggacacgcggcaggtggaaatattccagcaat
gatgagagtgaagggtctgacagtgaaaagtcatctgcagcttcagaagaggaagaggag
aaggagagtgaagaagccattgttgcagatgatgatgaaccatgcaaaaagtgtggcctc
ccaaatcatcctgaactcatcctgctgtgtgactcctgtgacagtggataccacaccgct
tgtcttcgccctcctctgatgatcatccctgacggagagtggttctgcccgccttgccaa
cataaactcttgtgtgaaaaattagaggaacagttgcaagatttggatgtggccttaaag
aagaaggagcgtgctgaacgaaggaaagaacgcttggtgtatgttggtatcagtattgaa
aacatcattcctccacaggaaccagatttttctgaagatcaagaagaaaagaaaaaagat
tccaaaaagaccaaagttaatttactggaaaggaggtcaacaagaacacggaaatgtata
agttacaggtttgatgagtttgatgaagcaattgatgaagctatagaagatgatatcaaa
gaggctgatggaggaggagttggccggggaaaagatatatctaccattacaggtcaccgt
gggaaagacatctctacaattctggatgaagaaagaaaagaaaataagcgaccccagagg
gcagcagctgctcgtcggaagaaacgccggcgactgaacgacctcgacagcgacagcaac
ctggatgaagaggagagtgaggatgaattcaagatcagtgacggatctcaagatgagttt
gttgtgtctgatgaaaacccagatgaaagtgaggaagacccaccatctaatgatgacagt
gacactgatttctgcagccgtagactgaggagacactcctcacggccaatgaggcaaagt
aggcgcttgcggagaaagatcccaaagaaaaaatactctgatgatgatgaagaggaggaa
tctgaggagaacagtagagactctgaaagtgactttagcgacgattttagtgatgatttt
gtggaaactcggcgaaggcggtcaaggaggaaccagaagagacaaattaactacaaagaa
gattcagaaagtgacggttcccagaaaagtatacgacgtggcaaagaaatcaggcgaatt
cacaaacgccgactttccagctcagaaagtgaagagagctatatgtccaagaactctgaa
gatggtgagctagctaaaggatcaaagcgctcagctcgaaagcgaggccgaagtacagat
gagtattccgaagcagaggaagatgaggaagaggaaggcagaccatcccgcaaacggctg
cacagaattgagacagatgaggaggagaattgtgacaatgctcacggagctgccgagccc
cctgcccgcgctggccagtccaggatccttccctcagagcacgagggcaccaagaagccc
taccggatagaaagtgacggggaagaggacttcgaaaacgtgggcaaagttgggagccca
ctggactatagcttagtggacttgccttccactaatggacagagtcctggcaaagccatt
gagaacttgattggtaagccagctgagaagcctctgacccccaaggacaacagtacagcc
agtgcaagcctggcccccaatgggacgagtggagggcaggaggcaggggccccggaggaa
gaagaagatgagcttttgagagtgactgaccttgttgattatgtctgtaacagtgaacag
ttataa
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