Ochotona princeps (American pika): 101526930
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Entry
101526930 CDS
T07609
Symbol
CHRNA1
Name
(RefSeq) acetylcholine receptor subunit alpha
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
opi04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
101526930 (CHRNA1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101526930 (CHRNA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
opi04040
]
101526930 (CHRNA1)
Ion channels [BR:
opi04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
101526930 (CHRNA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF4980
Claudin_2
Motif
Other DBs
NCBI-GeneID:
101526930
NCBI-ProteinID:
XP_004577101
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Position
7:complement(60225595..60242401)
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AA seq
457 aa
AA seq
DB search
MEPWPLLLLLGLCSAGFVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQL
INVDEVNQIVTTNVRLKQQWVDYNLKWNPEDYGGVKKIHVPSEKIWHPDLVLYNNADGDF
AIVKFTKVLLDYTGHITWTPPAIFKSYCEIIVTHFPFDEQNCSMKLGTWTYDGSVVAINP
ESDQPDLSNFMESGEWVIKESRGWKHWVFYSCCPTTPYLDITYHFVMQRLPLYFIVNVII
PCLLFSFLTSLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLF
TMVFVIASIIITVIVINTHHRSPSTHVMPEWVRKVFIDTIPNIMFFSTMKRPSRDKQDKK
IFTEDIDISDISGKPGPPPMGFHSPLIKHPEVKSAIEGVKYIAETMKSDQESNNASEEWK
YVAMVMDHILLGIFMLVCLIGTLAVFAGRLIELNQQG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggagccctggcctctcctcctgctccttggcctctgctcagctggcttcgtcctgggc
tccgaacatgagacccgcctggtggcaaagctgtttaaggactacagcagcgtggtgcgg
ccggtggaagaccaccgccaagtcgtggaggtcaccgtgggcctgcagctcatccagctc
atcaacgtggacgaagtgaatcagatcgtgacaacgaatgtccgtctgaaacagcaatgg
gtggattacaacctcaaatggaatccagaggactatggcggtgtgaaaaaaattcacgtt
ccctctgaaaagatctggcacccagacctggttctctacaataatgccgatggcgacttt
gccattgtcaaattcaccaaagtgctcctggactacactggccacatcacatggacaccc
ccagccatcttcaagagctactgtgagatcattgtcacccactttccctttgatgagcag
aactgcagcatgaagttggggacctggacctacgacggctctgtggtggccatcaatccg
gaaagcgaccagccagacctgagcaactttatggagagcggggagtgggtgatcaaggag
tcgcggggctggaagcactgggtgttctattcctgctgccccaccacaccctatctggac
atcacctaccacttcgtcatgcagcgcctgccactctacttcatcgttaatgtcatcatc
ccctgcctgctcttctccttcttaaccagcctggtgttctacctgcccacagactcaggg
gagaagatgactctgagcatctcggtcctcctgagcttgaccgtgttcctcctggtcatc
gtggagctcatcccttccacctccagcgccgtgcccttgattgggaagtacatgctgttc
accatggtgttcgtgatcgcgtccatcatcatcactgtcatcgtcatcaacacgcatcac
cgctcgcccagcacccatgtcatgcctgagtgggtgcggaaggtttttattgacacgatc
ccaaatatcatgtttttctcgacaatgaaaagaccatccagagacaaacaagacaaaaag
atttttaccgaagacatagatatttctgatatttctgggaagccagggcctccgcccatg
ggcttccactcgcccctgatcaaacaccccgaggtgaagagtgccattgagggcgtcaag
tacattgcagagaccatgaagtcagaccaggagtccaataacgcctccgaggagtggaag
tatgtcgccatggtgatggaccacattctcctgggaatcttcatgctggtctgtctcatc
ggaaccctggccgtgtttgcgggtcggctcatcgagttgaatcagcaaggatga
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