Ochotona princeps (American pika): 101527057
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Entry
101527057 CDS
T07609
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator
KO
K15623
protein SSXT
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03082
ATP-dependent chromatin remodeling
opi05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101527057 (SS18L1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
101527057 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101527057 (SS18L1)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101527057 (SS18L1)
GBAF(ncBAF) complex
101527057 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
101527057
NCBI-ProteinID:
XP_036354221
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MGSLEGTASSSRPVPPATATHGKRPSTLREPEHTSTRRHRPHPGCGAQEPVGLRSPPASW
AQRFGLHGQAPVPEAGTELKPPATTTAQAPGPSLPLTLARDGTGPGSLTLHSVVHEDLGQ
FLTRAASRYPTRASHIRLFSMCVFSSVSAMRLQQPGRAKWKRGAWVPSRERVHRYQQILH
RNLVYLATIADSNQNMQSLLPAPPTQNMTLGPGALTQSGPGQGLHAQGSLSDAIGSGLPP
TSLLQGQIGNGPSHASMQQTAQSTLPTTSMSMSGSGHGSAPGYSHAGPSSQSVPMQGQGP
ISSYVSRSNINMPSNPVSMMHQQAATSHYNSAQGGSQHYQGQSSIAMMGQGGQGSGMMGQ
RPMAPYRPSQQGSSQQYLGQEEYYSEQYSHSQGASESMNQQYYPDGHGDYTYQQSSYTEQ
SYDRSFDESTQHYYEGGKGAHWQHGHWRNR
NT seq
1349 nt
NT seq
+upstream
nt +downstream
nt
atgggctctctggagggcactgccagcagctcccggcctgtccctccagccacggcgacg
cacggcaagcggccctccacgctgcgcgagccggagcacacgagcacacggcgccatcgg
ccccacccgggctgtggagcacaggagccagtgggtctacgatctcctcccgcgtcatgg
gcacagcgcttcggcctccacggccaggcgcccgtcccggaagcgggaaccgagctcaag
cctccagccaccaccacggcccaggccccaggccccagcctcccgctgaccctggcccgg
gacgggacgggcccggggagcctgaccttgcactcggtggtgcacgaggaccttggtcag
ttcctcacacgtgcggcctcgcgctacccgacaagggcctcacacatccgtctattttct
atgtgcgttttctcttccgtctccgccatgcgcctgcagcagccgggccgggccaagtgg
aaacggggagcctgggtcccgtcccgggaacgggtgcaccggtaccagcagatcctgcac
cggaacctggtgtacctggccaccatcgcggactccaaccagaatatgcagtccctgctc
cctgcgccaccgacccagaacatgaccctgggtcctggtgccctgacacagagtggccct
ggccagggcctgcacgcccagggcagcctcagcgacgccattggctcaggcctgcccccc
acctccctcttgcaaggccagattggcaacggccccagccacgcgtccatgcagcagacg
gcgcagagcacgctgcccaccacctctatgagcatgtcaggaagcggccacggctcggcg
cccggctacagccacgcaggaccctcctcgcagagcgtccccatgcaggggcagggcccc
atcagcagctacgtgtcccgcagcaatatcaacatgccctctaacccagtttccatgatg
catcagcaagcagccacatcgcactacaactcggcgcagggtggcagccagcactaccag
ggccagtcgtccatcgccatgatgggccagggcggtcagggcagcggcatgatggggcag
cggcccatggcaccgtaccggccgtcccagcaaggctcttcccagcagtacctgggccag
gaggagtactacagtgagcagtacagccacagccaaggcgcctcggagtccatgaaccag
cagtactacccagacggccatggtgattatacgtatcagcagtcatcctacacggaacag
agctacgaccgctcgttcgatgagtctactcagcactactacgaggggggtaagggcgcc
cactggcagcatgggcactggagaaatcg
DBGET
integrated database retrieval system
