Ochotona princeps (American pika): 101527127
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Entry
101527127 CDS
T07609
Symbol
NOD1
Name
(RefSeq) LOW QUALITY PROTEIN: nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04621
NOD-like receptor signaling pathway
opi05132
Salmonella infection
opi05133
Pertussis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101527127 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101527127 (NOD1)
05133 Pertussis
101527127 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
opi04054
]
101527127 (NOD1)
Pattern recognition receptors [BR:
opi04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
101527127 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
CARD
NLRC4_HD2
NOD2_WH
LRR_4
AAA_16
AAA_22
ABC_tran
AAA_25
Motif
Other DBs
NCBI-GeneID:
101527127
NCBI-ProteinID:
XP_004582602
LinkDB
All DBs
Position
10:complement(18264470..18304964)
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AA seq
1114 aa
AA seq
DB search
MDILTTPGQHKGKETARAARASLGELHQPSSGRRRGRAGAALRRASDGREATAPCAPGGH
RSERAAPTSAGCPTSPGPSTASAAPAPPRRPRRPRRLPEARWPVGRVCRGHRLPGQFPFL
GRRDGPAAQLAERLWARRAPGPWPLALAAGPSEFCEEKQGHSEMELNPSSSHSHLKLLKV
HRELLVTQIRNTQCLVDNLLENDYFSVEDAEIVCACPTQPDKVRRILDMVQSKGEEVAEF
FLYVLQQLTDAYVDLRPWLADVGFMPSPLVQSRAIINTDPVSRYTQKLRHQLGCDSKFML
CYGKQEEMLLEETYTDTIMELVSFSNESLGSLDGPACLLDPSTGILNEQGETVFVFGDAG
VGKSMLLQRLQHLWASGRLDSGVKFFFHFRCRTFSCFRESDRLRLQDLLFKHYCYPEHNP
GEVFAFLLRFPQTALFTFDGLDELHSDFDLSRAPDSCCPWEPVHPLVLLANLLSGRLLKG
AGKLLTARTGVELPRQLLRKKVLLRGFSPGHLRAYARRMIPERVVQCRLLEQLEANPNLC
SLCAVPLFCWIIFRCFQHFHASPEGDGSSSQLPDQAVTLTDVFLLVAEMHLNKMQPRSLV
QRNTRSTVETFLAGRRSLLALGRLAHGGMAKGLFVFSQEQVQTCALQEEDLQLGFLRAAP
EPGPEGEGGPPSYEFFHITLQAFLTAFFLVVDDQVDTQELLAFFQEWAPPGEAAAASSCY
PRFLAFQRLGSSRPVRTDPFQKKDHLQFANLFLCGLLSKAKQKLLQHLVPLASLRRKRKA
LWAHLFASVRTYLKNLPRVQAGGFNQVQAMPTFLWMLRCIYETQSQEVGQLAARGMCANY
LKLTYCNACSADCSALSFVLLHFRKRLALDLDNNNLNDYGVRELQPCFSRLTVVRLSVNQ
ITDSGVKVLAEELTKYKILTYLGLYSNQITDVGAQYVAKVLDECRSLTHVKLGKNKITSE
GGKYLALAVKNSSSIIDVGMWGNQIGDEGAKAFAEALRNHPSLRNLSLAFNGITVEGGKS
LAQALCCNTSLRIFWLTKNELNDEAAESMAEMLKVNQTLQNLWLIQNQITAKGTAQLAEA
LQRNTGILEICLNGNPIEPEEAEAFAKEKRIICF
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggacatcctcacgacacccggccagcacaaagggaaggagacagcgagagctgcgcgt
gcgagcctgggcgagctgcaccaacccagctcggggcgtcgccgggggcgcgcgggcgct
gcgctcaggcgcgcctcggacggccgcgaggccacggcaccttgcgctcccgggggccac
cgcagcgagcgggcggcgcccacgtccgccggctgtccgacctcccctgggcccagcaca
gcctccgctgcccctgcgccgccccggcgtccccggcgtccccggcgtctccctgaagcc
cgctggcctgtggggcgcgtctgccgcggccaccgccttcctggccagttcccgttcctg
ggccggcgagacggccccgcggcccagctagctgagcgtctgtgggcgcggcgcgctcct
gggccctggcccctggccctggctgctggccccagcgagttctgcgaagaaaagcagggc
cacagtgagatggaactaaacccatccagctctcattcccacctgaagttgctgaaagtc
caccgggaattgctggtcacccagatccgtaacacccagtgtctggtggacaacctgctg
gagaacgactacttctcagtggaagatgcagagattgtgtgtgcctgccccacccagccc
gacaaggtccgcagaatccttgacatggtgcagagcaagggcgaggaggtggccgagttc
ttcctgtacgtcctgcagcagctcacggacgcctatgtggacctcaggccatggctggcg
gatgtgggcttcatgccttccccgcttgttcagagcagagctatcatcaacaccgaccca
gtgagcaggtacacccagaagctgcgtcaccagctgggctgcgactccaagttcatgctg
tgctatggcaagcaggaggagatgttgctggaggagacgtacacggacaccatcatggag
ctggtcagcttcagcaacgagagcctgggcagcctggacggccccgcgtgcctgctggac
cccagcacgggcatccttaatgagcagggtgagaccgtgttcgtttttggtgatgctggc
gtgggcaagtccatgctgctgcagcggctgcagcacctctgggcctcgggccggctggac
tcaggggtcaagttcttctttcacttccgctgccgcacgttcagctgcttccgggagagc
gacaggctacgtctgcaggacctgctcttcaagcactattgctacccggagcacaacccc
ggcgaggtgtttgcctttctgctgcgctttccccagacggccctcttcaccttcgatggc
ctggacgagctgcactcggactttgacctaagccgtgcgcctgatagctgctgtccgtgg
gagcccgtacaccccctggtcctgctggccaacttgctcagtggcaggctgctcaaaggc
gccggcaagctgctcacagcacgcacgggcgtcgagctccctcgtcagctgctgcgcaag
aaggtgctgttgcgcggcttctccccgggccacctgcgtgcctacgcccgcaggatgatc
cccgagcgggtggtgcagtgccgcctgctggagcagctggaggccaaccccaacctgtgt
agcctgtgcgccgtgcccctcttctgctggatcatcttccgttgcttccagcacttccac
gcctcccctgaaggcgacggctcctcctcgcagctgcctgatcaagctgtgaccctgact
gacgtcttcctgctggtcgccgaaatgcaccttaacaagatgcagcccaggagcctggtg
caacgcaacacgcgcagtacggtggagaccttcctagctggccgccgcagcctgctggcg
ttgggccggctggcacatgggggcatggccaagggtctgtttgtcttcagccaagaacag
gtgcagacctgtgccttgcaggaggaggacctccagctgggtttcctgcgggcagcacca
gagccaggccccgagggcgaaggtggcccaccatcctatgagtttttccacatcaccctg
caggccttcttgactgccttctttctcgtggtggatgaccaagtggacacacaggagttg
ctggcattcttccaggagtgggcaccacctggggaggcagcggctgcttcctcctgctat
ccccgcttccttgctttccagcgtctgggcagcagccgccccgtcaggacagaccctttc
cagaagaaagatcacttgcagttcgccaacctcttcctgtgcgggctgctctccaaggcc
aagcagaaactcctgcagcacctggtgcccctggcgagcctgcggaggaagcgcaaggca
ctgtgggcgcacctgtttgccagtgtgcggacctacctgaagaacctgccccgggtgcag
gccgggggcttcaaccaggtgcaggccatgcccaccttcctgtggatgctgcgctgcatc
tatgagacgcagagccaggaggtggggcagctggcagcccgtggcatgtgtgccaactac
ctcaagctgacctactgcaatgcctgctcggccgactgcagtgccctctccttcgtcctg
cttcactttcgcaagcgcctggccctggacctggacaacaacaatctcaatgactatggt
gtacgcgagctgcagccctgcttcagccgcctcactgttgtcagactcagcgtgaaccag
atcacagatagtggtgtgaaagtgctggctgaagagctgaccaagtacaagatcctgacg
tacttggggttatacagcaaccagatcactgatgtgggagcccagtatgtggccaaggtc
ctggatgagtgtagaagtctcacacatgtgaagttgggaaaaaacaaaataacgagtgaa
ggagggaagtacctggccctggccgtgaagaacagcagctccatcattgatgttggcatg
tggggcaatcagatcggggatgaaggtgccaaagccttcgctgaagccctcaggaaccac
cccagcctgagaaacttgagcctcgcgtttaacggcatcaccgtggaaggagggaagagc
cttgcccaggccctgtgctgcaacacgtccctgcggatattctggctgaccaaaaacgaa
ctcaatgatgaggcggcagagagcatggcagaaatgctgaaggtcaaccagacgctgcag
aacttatggcttatccagaaccagatcacagccaaggggactgcccagctggcggaggcc
ttgcagagaaacacgggcatcctggagatctgtctgaatggcaacccgatagagccagag
gaggcagaagcctttgccaaggagaagaggattatctgcttctga
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