Ochotona princeps (American pika): 101527139
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Entry
101527139 CDS
T07609
Name
(RefSeq) tripartite motif-containing protein 43
KO
K12019
tripartite motif-containing protein 43/48/49/64/77
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101527139
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101527139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
RING_XB3-XBAT31
zf-RING_10
zf-RING_5
U-box
Actin_micro
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
101527139
NCBI-ProteinID:
XP_004585315
LinkDB
All DBs
Position
1:44111896..44131239
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AA seq
443 aa
AA seq
DB search
MDLDILHQVQKELSCAICLNYMMDPVTINCGHSFCRPCVCLAWEEAKSPVLCPVCREPAQ
KEDFKTNVHLKNLVSIARQASIQHSQNSEEDMCGTHKETRKIFCEEDKSLLCVLCSDPQE
HAGHRHCAIDHAAENSREMLAKQMRSLWKQMEENQRNLNEESTILSEWTVSGRLENIKVS
YEMLHPGPHQDEKQHMDTLRKQQNSIFQKLKKSKAKMVLKKQQLKKIYKELMKMYHQPDV
ELLQKLGRLLKRCESLQQQMPQPVHPELSAQSIPGLIDWLRQFQVEISFQYEMTSHFHVR
RLMFGQDHQGSRPNSDRFDYAAAWAKQNFSCGKHYWELDMNDSCDWALGVCKDSGIRSNG
RLRESEGSFLLLCWKEMGSYRLLTISPLFAHYVEKPMGRVGVFLDFERGSVSFVDVARSS
LIWRYSNGSLYFPVRPFIFTRHT
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggacttggacatcctacaccaggtccagaaagaactctcttgtgccatctgcctcaac
tacatgatggacccagtcaccataaactgtgggcatagcttttgcaggccctgtgtctgt
ctcgcctgggaagaggctaaatcgcctgtcttatgcccagtgtgcagagaaccagcacaa
aaggaagacttcaaaaccaatgttcatttgaagaatctggtttccattgccagacaagcc
agcatccagcactcccagaactctgaggaggacatgtgtggcacccacaaggagaccagg
aagatattctgtgaagaagacaagagcctgctctgtgtgctctgctctgaccctcaggag
catgctggtcacagacactgtgccattgaccacgctgcagagaacagcagggagatgctg
gcgaagcaaatgagatcattatggaaacagatggaagaaaaccagaggaacctgaatgag
gagagcacaatactctctgagtggacggtgagtgggagactagagaatatcaaggtgtct
tatgagatgctgcatccaggcccacatcaggatgaaaaacaacacatggacacacttaga
aaacaacagaacagtattttccaaaaacttaagaaaagcaaagccaaaatggttctaaag
aagcagcagctaaaaaaaatatataaagaactgatgaaaatgtaccatcaaccagacgtg
gagctgctccagaaattgggaagactattgaaaaggtgtgagtcattgcagcaacagatg
ccccagcctgtgcacccagagctcagtgcccagtccatacctggcctgatagactggctc
aggcagttccaagtggaaatttccttccagtatgaaatgaccagtcacttccatgtgaga
aggctaatgtttggacaggaccaccaaggctcaaggccgaactctgacagatttgattat
gctgctgcctgggcaaagcagaacttctcctgtgggaaacactactgggagctggacatg
aatgactcttgcgactgggctctaggggtctgcaaggactctggcatcaggagcaatggc
aggcttagggaatcagagggctcatttcttcttctttgttggaaggagatgggaagctac
agactcctaaccatttcccctctgtttgctcactatgtagagaaacctatgggcagagtt
ggtgtgttccttgattttgagaggggaagtgtgagttttgtggatgttgctagaagctct
ctcatatggaggtactccaatggctcgctctatttccctgtcaggccttttattttcact
cggcacacgtga
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