Ochotona princeps (American pika): 101527242
Help
Entry
101527242 CDS
T07609
Symbol
HMGCL
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi00280
Valine, leucine and isoleucine degradation
opi00650
Butanoate metabolism
opi01100
Metabolic pathways
opi04146
Peroxisome
Module
opi_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
101527242 (HMGCL)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
101527242 (HMGCL)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101527242 (HMGCL)
Enzymes [BR:
opi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
101527242 (HMGCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
101527242
NCBI-ProteinID:
XP_004592315
LinkDB
All DBs
Position
13:4310510..4342132
Genome browser
AA seq
325 aa
AA seq
DB search
MATVRKVLPRRLVGLATLRAVSTSSVGTLPKQVKIVEVGPRDGLQNEKNVVPTAVKIKLI
DMLSEAGLPVIEATSFVSPKWVPQMADHTEVLRGIQKFPGRSYPVLTPNLKGFESAVAAG
AKEVSIFGAASELFTKKNINCSIEESFQRFDAILQAARAASIPVRGYVSCVLGCPYEGKV
SPAKVAEVAKKLYSMGCYEISLGDTIGVGTPGAMKDMLSAVTHEVPLSALAVHCHDTYGQ
ALANTLVALQMGVSVVDASVAGLGGCPYAQGASGNLATEDLVYMLAGLGIHTGVNLQKLL
AAGDFICQALNRKTSSKVAQATCKL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagtgaggaaggttctgccgcggcgactggtgggcttggcgaccctccgggct
gtcagcacatcgtctgtgggcacgctccccaaacaggtgaaaattgtggaagttggtccc
cgagatggactacaaaatgaaaagaatgtggtccccacggccgtgaagatcaagctgata
gacatgctgtctgaagcagggctgcccgtgatagaagccaccagcttcgtgtctcctaag
tgggtgccccagatggctgaccacactgaagtcttacggggcatccagaagtttcctggc
cgcagttacccagtcctaaccccgaatttgaaaggctttgagtcagcggtggctgccggc
gccaaggaagtgagcatcttcggagccgcctctgagctcttcaccaaaaagaacatcaac
tgctccattgaggagagtttccagcggtttgatgccatcttgcaggcagctcgggcagcc
agtatccccgtgcggggatatgtctcctgtgtgctgggatgcccctacgaagggaaggtc
tccccggctaaagtggctgaggtcgctaagaagttatactcaatgggctgctatgagatc
tccctgggggacaccatcggcgtgggcactccaggggccatgaaggacatgctgtctgct
gtcacacacgaggtgccgctgtctgccctggctgtccactgccacgacacctacggccaa
gccctggccaacaccttggtggccttacagatgggggtgagcgtcgtggatgcctccgtg
gccggacttggaggctgcccctatgcacagggtgcgtccgggaacttggccaccgaggac
ctggtctacatgctggcaggcttgggcattcacacgggtgtgaacctccagaagctcctg
gcagcgggtgactttatctgccaagccctcaacaggaaaaccagttccaaagtggcccag
gccacctgcaaactctga
DBGET
integrated database retrieval system
