Ochotona princeps (American pika): 101527361
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Entry
101527361 CDS
T07609
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101527361 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
opi03041
]
101527361 (DHX15)
03009 Ribosome biogenesis [BR:
opi03009
]
101527361 (DHX15)
Enzymes [BR:
opi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101527361 (DHX15)
Spliceosome [BR:
opi03041
]
Complex A
U2 snRNP components
U2 related factors
101527361 (DHX15)
Complex B
101527361 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
101527361 (DHX15)
Ribosome biogenesis [BR:
opi03009
]
Eukaryotic type
90S particles
Helicases
101527361 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
101527361
NCBI-ProteinID:
XP_004579230
LinkDB
All DBs
Position
2A:complement(13399512..13456150)
Genome browser
AA seq
795 aa
AA seq
DB search
MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE
LRASTNAMLISAGLPPLKASHSAHSTHSAHSAHSAHSAHSAHTGHAGHTSLPQCINPFTN
LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS
LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM
LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF
QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE
EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF
VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV
RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ
LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL
DRIIAKLQSKEYSQY
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccatcggttggacttgggggaggattacccctccggcaagaagcgtgcg
gggaccgatgggaaggatcgagatcgggatcgggatcgtgaagatcggtccaaagatcga
gaccgagaacgagatagaggagatagggagcgggaaagggagaaggaaaaggagaaggaa
ttgcgagcctccacaaatgctatgcttatcagcgctggattaccaccgttaaaagcgtcc
cactcggcccactcaacccactcggcacattcggctcattctgctcattcggctcattcg
gcacacaccgggcatgccgggcacacgtcgctcccccagtgcatcaatccattcaccaac
ctgccacatacgcctcggtactacgatattctaaagaaacggctacagctccctgtttgg
gaatacaaggatagatttacagatattttggttagacatcagtcatttgtactggttggt
gagaccggctctggtaagacaacacagattccacaatggtgtgtggagtacatgcgctca
ttaccaggcccgaagagaggagttgcctgtactcagcccaggagagtggccgcaatgagt
gtggctcagagagttgctgatgaaatggacgtaatgttgggtcaggaagttggttactcc
attcgatttgaagactgcagtagtgcaaaaaccattcttaagtatatgactgatggaatg
ctacttcgtgaagctatgaatgatccgctgttggagcgttacggcgtgataattcttgat
gaggctcatgaaaggacactggctacagatattctcatgggtgttctgaaggaagttgta
agacagagatcagatttaaaggtgatagttatgagcgctactctagatgcaggaaagttc
cagatttacttcgataactgtcctcttttaactattccggggcgtacacatcctgttgag
atcttctatactccagaaccagagagagattatcttgaagcagcgattcgaacagtgatc
cagattcatatgtgtgaagaggaggagggagatcttctacttttcttaactggtcaagag
gaaattgatgaggcctgtaagagaataaagcgtgaggtggatgatttgggccccgaggtt
ggtgacattaagatcattccattgtactccacacttccacctcagcagcagcagcgcatt
tttgagcctcctcctccaaaaaaacaaaatggagcaattggaagaaaggtagtggtgtca
actaacatcgcagagacatcgttgacaatagatggtgtggtgtttgtaatagatcctgga
tttgcaaaacaaaaggtctacaatcctcggatcagagttgagtctctgttagttacggcg
attagcaaagcctctgctcagcaaagggctgggcgagctggccgtacccgtcctgggaag
tgcttcaggctctacacagagaaggcctataaaacagaaatgcaggataacacttaccct
gagattttgcgttccaatttaggatcagttgtgttgcagttgaagaaactgggtattgat
gacttggtacattttgattttatggatccaccagctcctgaaactctgatgcgagccctg
gaactcttgaattatctggctgctttaaatgatgatggagatcttactgaattaggatcc
atgatggcagaatttccactagatccacagctcgctaaaatggttattgcaagttgtgac
tacaactgttctaatgaggtcctatctattactgctatgttgtcagtcccacagtgtttt
gttcgccccacggaagccaagaaagctgctgatgaggccaagatgagatttgcccacata
gatggagatcatctgacactgctaaatgtctaccacgcatttaaacaaaatcatgaatcg
gttcagtggtgttacgacaacttcattaactacaggtccctgatgtccgcagacaatgta
cgccagcagctatcacgaattatggacaggtttaatttgcctcgtcggagtactgatttt
acaagcagggactattatattaatataagaaaagctttggttactgggtatttcatgcag
gtggcacatttagaacgaacagggcattacttaactgtgaaagacaaccaggtggtccag
ttgcatccatctactgtcctcgaccacaagcctgaatgggtgctttataatgagtttgtc
ctgacaacaaagaattacatccggacatgcacagacattaagccagagtggttggtgaaa
attgcccctcaatattatgacatgagcaatttccctcagtgtgaagcaaagagacagttg
gatcgcatcattgccaaacttcagtccaaggaatattcgcagtactaa
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integrated database retrieval system