Ochotona princeps (American pika): 101527369
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Entry
101527369 CDS
T07609
Symbol
PRDM13
Name
(RefSeq) LOW QUALITY PROTEIN: PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101527369 (PRDM13)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
101527369 (PRDM13)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_7th_ZNF462
zf-BED
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
101527369
NCBI-ProteinID:
XP_004580578
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Position
12:88151953..88159438
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AA seq
772 aa
AA seq
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MAARVTPRAEDARRGAASXASAPLRICHSRPDEDPVRPSACLAAATSSTTTMHAATRVPA
TSVSADCCIPAGLRLGPVPGTFKLGKYLSDRREPGPKKKVRMVRGELVDESGGSPLEWIG
LIRAARNPQEQTLEAIADLPGGQIFYRALRDVQPGEELTVWYSNSLAQWFDIPTTATPTH
DEKGEERYICWYCWRTFRYPNSLKAHLRFHCVLSGGGGGAGRSLLLQEHAARPSAAPAAD
GLGLSPKAPGPEFAALTPADPLRPRPQAPLPTQGCGARESIKREVSSAPSATSSSPSKWG
LPKKGKEQPDRALDMSGAARGHGHFLGNVGGSPARGGSLAFYPGVRSAFKPAGLARSAAA
GQVDLYREEGGGKQGAGLALGRLLSGGRTGGRPGSGENLAAGSAGHHHHHHAHHHHHHPK
CLLAGDPPPPPPPSGLPCSGALRGFPLLPGPPEEASAFKHVERTPPATAAALPGARYSQL
PPAPGVSLERCALPPLEAGGFKAYPGGEYSHLPAVMPAFTVYNGELLYSSPAAAAYYPLK
LHFGGLLKYPESISYLSGPAAAAAAAAAAAAAALSPAELGSLASIDREIVMHTQQLSEMA
SGKGRGRLDSGTLPPAVVASGGPGGGGGSSVGKPKTGHLCLYCGKLYSRKYGLKIHMRTH
TGYKPLKCKVCLRPFGDPSNLNKHIRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPG
QSLLAKAGDGPGAEPGYPPEPGDPKSDDSDVDVCFTDDQSDPEAGGGCERDS
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccgcgtcactccgcgggcggaggacgcacgtcggggtgcggcttccntggct
agcgcaccactccggatctgtcactcgcgccctgacgaagaccctgtgcgccccagcgcc
tgcctggcggcggcgacatcatcaacaacaactatgcacgcagccacccgcgttccggcc
accagcgtcagtgccgactgctgcattcccgccggtttgcgcctcgggccggtgcccggc
acctttaaactgggcaagtacctgtcagaccgcagggagcctgggcccaagaaaaaggtg
cgcatggtgagaggcgagctggtggacgagtcggggggctcccctctggagtggataggg
ttaatccgggcagccaggaacccccaggaacagactctggaagctattgcagacttaccg
ggaggacagatcttctatcgagccttacgagacgtccagccgggggaggaactgacggtg
tggtattccaattccctggctcagtggttcgacatccccaccaccgcgactccgacgcac
gacgagaaaggagaggagcgctacatttgctggtactgctggaggacttttaggtacccc
aacagcctcaaggcacacctgcgcttccactgcgtgcttagcggtggtggcggcggcgcc
ggccgctcccttctgctccaggagcacgcggctcgtcctagcgctgccccggcggcagac
ggccttggcctctctcccaaagcccctgggcccgaattcgccgcgctcaccccagcagac
cctttgaggccccgcccgcaggccccactgcccactcagggctgcggggcgcgggagagc
atcaagcgcgaggtctcctctgcgccctcggccacctcatcgtccccgagcaagtgggga
ttgcccaagaaaggcaaggaacagccggaccgcgccctggacatgagcggggccgcccga
ggacacggccatttcctgggcaacgtgggtggttccccagcgaggggtggcagcctggcc
ttctaccccggcgtgcgttccgctttcaagcccgccggcttagccaggtcggctgcggcc
ggccaagtcgacctctacagagaggagggcggaggcaagcagggagccggcctggccttg
ggcaggcttctgagtgggggccggacaggcgggcgcccgggtagcggggagaacctggcg
gcgggcagcgccggccaccaccatcaccaccatgcgcaccaccatcaccaccaccccaag
tgcctgctcgcgggggacccgcctccgcctccgcctccgtctggcttgccttgctcgggg
gccctgcgcggctttcctctgctgcccggcccgccggaagaggcgtccgccttcaagcac
gtggagcggaccccgcccgccactgccgcagccctcccgggagcgcggtactcgcagctg
cctcccgcgcctggggtgtctctggagcgttgcgctctgccgcccctcgaagccgggggg
ttcaaggcctatcccgggggcgagtatagccacctgcccgccgtcatgccggcctttacc
gtctacaacggggagctactctacagctcgccggccgccgcagcatactacccactcaaa
ttgcacttcggtgggctgctcaagtatcctgagtccatctcctatttaagcgggccggcg
gctgctgcggcggctgctgctgctgctgctgcggccgccctaagccccgctgagctgggg
tccctggccagtattgaccgtgagatcgtcatgcatacgcagcagctgtcggagatggcg
tctggaaagggccgcggccggctggactcagggacgctgccaccggccgtggtggcgtca
ggcggccctgggggcggcggtggcagcagcgtgggcaaacccaagaccggccacctgtgc
ctctactgcggcaagctgtactcgcgcaagtacgggctcaagatccacatgcggacacac
acgggctacaagccgctcaagtgcaaagtgtgcctgcggcccttcggcgaccccagcaac
ctcaacaagcacatccggctgcacgccgagggcaacacgccctaccgctgcgagttctgc
ggcaaggtgctcgtgcgccgccgggacctggagcgccacgtcaagtcgcgccaccctggc
cagagcctgctcgccaaggccggcgacggcccgggcgccgagcccggctaccccccggag
ccgggtgatcccaagagcgacgacagcgacgtggacgtctgcttcacggacgaccagagc
gacccggaggccgggggcggctgcgagcgcgactcttaa
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