Ochotona princeps (American pika): 101527455
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Entry
101527455 CDS
T07609
Symbol
HNRNPA1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03040
Spliceosome
opi05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101527455 (HNRNPA1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101527455 (HNRNPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101527455 (HNRNPA1)
03041 Spliceosome [BR:
opi03041
]
101527455 (HNRNPA1)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101527455 (HNRNPA1)
mRNA cycle factors
Common to processing body (P body) and stress granule
101527455 (HNRNPA1)
Spliceosome [BR:
opi03041
]
Common components
Common spliceosomal components
hnRNP proteins
101527455 (HNRNPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
101527455
NCBI-ProteinID:
XP_004583205
LinkDB
All DBs
Position
4:complement(53043192..53049328)
Genome browser
AA seq
371 aa
AA seq
DB search
MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV
TYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMASASSTPRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGFGGSRGGGGYGGS
GDGYNGFGNDGGYGGGGPGYSGGSRGYGSGGQGYGNQGSGYGGSGSYDSYNNGGGGFGGG
SGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPYGGGGQYFAKPRNQGGYGGSS
SSSSYGSGRRF
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagtcggagtctcccaaggaacccgaacagctgcggaagctcttcatcggaggc
ctgagcttcgaaacgaccgacgagagcctgcggagccattttgagcaatggggaacgctc
acggattgtgtggtgatgagagacccgaacaccaagcgctccaggggctttgggtttgtc
acctacgccaccgtggaggaggtggatgcggccatgaacgcaaggccacacaaggtggat
ggcagagtggtggaaccaaagagggctgtctccagagaagattctcaaagacccggtgcc
catctcactgtgaagaaaatctttgtggggggaattaaagaagacactgaagagcaccac
ctccgagattactttgagcagtatgggaaaatcgaagtgattgagatcatgactgatcga
ggaagtggcaagaagaggggcttcgcttttgtgacctttgatgaccatgattctgtggac
aagattgtcattcagaaataccatactgtgaatggtcacaattgtgaagtcaggaaggcc
ttgtccaagcaggagatggccagcgcttcttctaccccaagaggtcggagcggttctgga
aactttggtggtggccgcggaggcggctttggtggcaatgacaactttggccgaggagga
aacttcagtggtcgtggtggctttggtggcagccgaggtggtggtggttatggtggcagt
ggggatggttacaatggatttggtaacgatggtggttatggaggaggcggccctggttac
tctggaggaagcagaggctatggaagtggtggacagggttatggaaaccagggcagtggc
tatggcgggagtggcagctatgacagctataacaacggcggaggcggctttggcggtggt
agtggaagcaactttggaggcggtggaagctacaatgactttggcaattacaacaatcag
tcttcaaattttggacccatgaagggaggaaactttgggggcagaagctctggcccctat
ggtggtggtggccaatattttgccaaaccacgaaaccaaggtggctatggcggttccagc
agcagcagtagctatggcagtggcagaagattttaa
DBGET
integrated database retrieval system
