Ochotona princeps (American pika): 101527659
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Entry
101527659 CDS
T07609
Symbol
ATG4A
Name
(RefSeq) cysteine protease ATG4A isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04136
Autophagy - other
opi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101527659 (ATG4A)
04136 Autophagy - other
101527659 (ATG4A)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
opi01002
]
101527659 (ATG4A)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101527659 (ATG4A)
03029 Mitochondrial biogenesis [BR:
opi03029
]
101527659 (ATG4A)
Peptidases and inhibitors [BR:
opi01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
101527659 (ATG4A)
Membrane trafficking [BR:
opi04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
101527659 (ATG4A)
Mitochondrial biogenesis [BR:
opi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
101527659 (ATG4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
101527659
NCBI-ProteinID:
XP_004590236
LinkDB
All DBs
Position
X
Genome browser
AA seq
398 aa
AA seq
DB search
MESVLSKYENQITIFTDYLEEFPDTDELVWILGKQHLLKTEKSKLLSDISARLWFTYRRK
FSPIGGTGPSSDAGWGCMLRCGQMMLAQALICRHLGRDWNWEKQKEQPEEYQRILQCFLD
RKDCCYSIHQMAQMGVGEGKSIGEWFGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIE
DIKKMCCVLPLSAGTPGERSPESLAASNQSKGTSACCPAWKPLLLIVPLRLGINQINPVY
VDAFKECFKMPQSLGALGGKPNNAYYFIGFLGNELIFLDPHTTQTFVDTEENGTVDDQTF
HCLQSPQRMNILNLDPSVALGFFCKEEKDFDNWCSLVQKEILKENLRMFELVQKHPSHWP
PFVPPAKPEVTTTGAEFIDSTEQLEEFDLEEDFEILSV
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagttttgtccaagtatgaaaaccagattaccattttcactgactatctagaa
gaatttccagatacagatgagctggtatggatcttgggcaagcagcatctccttaaaacg
gaaaaatctaagctgttgtctgatataagtgcacgtctatggtttacatacagaaggaaa
ttttcaccaattgggggaactggcccttcatcagatgctggctggggttgtatgctacgt
tgtggacaaatgatgctggctcaagcccttatctgtagacacttgggaagggactggaac
tgggagaaacaaaaagaacaacccgaggaatatcaacgaatcctacagtgctttttagac
agaaaagactgttgctactctattcatcaaatggcacaaatgggtgtaggagaagggaaa
tctattggcgaatggtttggaccaaatacagttgcacaggtgttaaaaaaactcgcttta
tttgatgaatggaattccttggctgtttatgtttcaatggataatacagtggtcattgaa
gatatcaaaaaaatgtgctgtgtccttcccttgagtgctggcacccctggtgaaaggtcc
cctgagtctctggctgcttcgaaccagagtaagggcacatctgcctgctgcccagcctgg
aaacccctgctactcattgtgcccctccggctgggcataaaccaaatcaatcccgtctat
gttgacgcattcaaagagtgttttaagatgccacagtctttaggggcattaggaggaaaa
ccaaataacgcctattatttcataggattcttaggtaatgagctcatcttcttggaccct
cacacaacccaaacctttgttgatactgaggagaatggaacagttgatgaccagactttt
cattgcctgcagtccccccagcgaatgaatattttgaacctggatccttctgtggcattg
ggatttttctgcaaagaagaaaaagactttgataactggtgtagccttgttcagaaggaa
atcctaaaggagaatttaaggatgtttgaattagttcagaaacatccatcacactggcct
ccgtttgtacctccagccaaaccagaagtgacaaccactggggcagaattcattgactct
actgaacaactggaggagtttgacctggaggaagattttgagattctgagcgtgtag
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integrated database retrieval system
