Ochotona princeps (American pika): 101527674
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Entry
101527674 CDS
T07609
Symbol
POLRMT
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
opi03029
]
101527674 (POLRMT)
Enzymes [BR:
opi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101527674 (POLRMT)
Mitochondrial biogenesis [BR:
opi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
101527674 (POLRMT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PSD2
PPR_2
PPR_3
Phage_lysozyme
TPR_24
Motif
Other DBs
NCBI-GeneID:
101527674
NCBI-ProteinID:
XP_004596017
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MSDATLRSRRRPRNSARGGRRALALRAEEVRGRPGLRAQEGTPGAWGSKRRSSSASPQEQ
DGRKDWGHAQLLEVLEARVRQLQAETVSEVMVKPVEVARLPLSGEAQARPGSCSRWASKL
HQEQQTLQKRRQRLEVKLQVQAQQRARELQPRQLRVEPRLLSPQLASRLPRGPRGTPESP
WEEPLAQALRVAPQKLDREPTRTPHVSGHQQRLLSFLQCCVVAGQLPLAHHVLVSYHSKP
RRQQLLTLPMYNTVLLGWARKGSFKELLYVFWMLKDAGLAPDLQSYAAALQCMGRRDQDA
ATIRRCLRQLRQDGLQLPQLFTAITLSEEERAALLKAVVKVEPTFSPPPPPPPSLNTSTL
LKGVYAKDSPASYPKLPLPLGALQSLFQQQLHLELGSVVHVTSVEKAPLPTQETLHARQT
LKTLRAQWEADLHRGLQETKARLAREAQKGYPSLYPYLCLLSEGELVQLLMQTLQALPAQ
GESLISLAYNLGLRVFNRHVVHRKQLSGQVQQLEQQYLQYLRLLASDTQVAQPCLPREYW
EVLSGPAPPPEQPWPPVVLLQLGRQLAEVLVQAAQMPRSLAAPQGACRLIPVLYHVYSFR
SFRQVGILKPHPAFTQLLTTAAEPTLTFEAAEVPMLCPPLPWTSPHAGAFLLTPTKLMRA
VEGTTQHQRLLERCPPAQLHGALDALTQLGNCAWRVNGHVLDLVLQLFQAKGCLRLGVPP
PPCEAPRPPESRLPRSAPPARKAELRRELARCLKAAREMRSLRADALYRLSLAQHLRHRI
FWLPHNMDFRGRTYPCPPHFNHLGSDLARALLEFADGRPLGPHGLDWLKIHLVNLTGLKK
RESLQARLAFANQVLDEILDSADQPMTGRKWWMDADEPWQTLACCMEVARAVRAPDPATY
ISHFPVHQDGSCNGLQHYAALGRDSVGAASVNLLPSELPQDVYSGVAAQVEVFRRQDAEQ
GVRVAQALEGFVSRKVVKQTVMTVVYGVTRYGGRLQIEKRLRELQDFPQELVWEASHYLV
RQVFHSLQEMFSGTRAIQHWLTESARLISHAGSAVEWVTPLGIPVIQPYHRDSKMQVRGG
IQNLTCRSSWDSSQKPNVLKQRNGFPPNFIHSLDSSHMMLTALHCYRKGLTFVSVHDCFW
THAADIPVMNQVCREQFVQLHRQPILQDLSRFLVQRFCASPPRGQKLSQHIQYTRLLETL
QAVPETGAFDLEQVKDSTYFFS
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgcgacccttcgcagccgccgtcggccgcggaactcggcccgaggcgggcgg
cgcgcgctggcgctgcgggccgaggaggtgcggggccggcccgggctgcgagcgcaggaa
gggaccccaggcgcctggggctccaagaggcgcagctcttcggccagtcctcaggagcag
gatggccggaaggactggggccacgcacagctgctggaagtgctggaggctcgagtgcgg
cagctccaagccgagactgtgtcggaggtgatggtgaagccggtggaggtggcccggctt
ccgttgtccggggaggcccaggcgcggccgggctcctgcagccgctgggccagcaagctg
caccaggagcagcagacgctgcagaagcgccggcagcggctggaggtgaagctgcaggtg
caggcccagcaacgagcccgggagctgcaaccccggcagctgcgcgtggagccgcggctg
ctgagcccgcagctggccagccgcctgccgcgggggccgcgggggacccctgagagcccc
tgggaggagccgctagcccaggcgctgcgggtggcgccccagaagctggaccgcgagccg
acgcggacgccgcacgtgtcgggccaccagcagaggctgctgtcattcctccagtgctgt
gtggtcgccgggcagctgcctctggcccaccacgtgctggtcagctaccacagcaagccc
cgcaggcagcagctgctcacgctgcccatgtacaacaccgtcctgttgggctgggcccgc
aagggctctttcaaggagctgctctatgtgttctggatgttgaaggacgctggcctcgcc
cccgacctgcaatcctacgcggccgccctgcagtgcatggggaggcgagaccaggacgct
gctaccatccggaggtgcttgcggcaactgcgccaggatgggctacaactgcctcagctc
ttcacggccatcaccctgtctgaggaggagcgggctgcgctgctgaaggccgtggtcaag
gttgagcccaccttcagcccaccgcccccacccccgccctcactcaacacctccacgctg
ctcaagggggtgtacgcaaaggacagccccgcgtcctaccccaagctgcccctgcccctg
ggggccctgcagagcctgttccagcaacagttgcacttggagctgggcagcgttgtccac
gtcacatccgtggagaaggccccactgcccacccaggagaccctgcacgcgcgacagacc
ttgaagaccctgcgtgcccagtgggaggcggacctgcaccggggcctgcaggaaaccaag
gccaggctggcccgggaggcccagaagggctacccttcactctacccgtacctgtgcctg
cttagtgagggcgagttggtgcagctgctgatgcagactctgcaggcgttgccagcccag
ggggagtccctcatctccctggcctacaacctgggcctgcgggtcttcaaccggcacgtg
gtgcacaggaaacagctgagcggccaggtgcagcagctcgagcagcagtacctgcagtac
ctgcgtctgctggcctcggacacccaggtggcgcagccctgcctgccccgagagtactgg
gaggtgctgagtggccctgcgccgccgcccgagcagccctggccgcctgtggtgctgctg
cagctgggcaggcagctggccgaggtgctggtgcaggccgcccagatgccccgcagcctg
gccgcgccacagggtgcctgtagactcatcccggtgctgtaccacgtgtactcgttccgc
agcttccggcaggtcggcatcctgaagccacacccggccttcacgcagctgctgacgacg
gccgcggagcccacgctgaccttcgaggcagccgaggtgcccatgctgtgtcccccgctg
ccttggacctcaccacatgctggcgccttcctgctgacgcctaccaagctgatgcgggcg
gtggagggcaccacacaacaccagcgcctcctagagcgctgcccgcccgcccagctgcac
ggggccctggacgcccttacccagctgggcaactgcgcctggcgcgtcaacggccatgtg
ctggacctggttctgcagctcttccaggccaagggctgcctccgcctgggcgtgcccccg
cctccctgcgaggccccccggccccccgagagccgtctgccacgcagtgccccgccagcc
cgcaaggcagagctgcggcgggagctggcgcggtgcctcaaggcggcccgggagatgcgc
agcctgcgcgccgacgccctgtaccgcctctctctggcccagcacctgcggcaccgcatc
ttctggctgccccacaacatggacttccgtggtcgcacctacccttgcccgccccacttc
aaccacctgggcagcgacctggcccgcgccctactggagtttgccgatggccgcccactc
gggccccacgggcttgactggctcaagatccacctggtcaacctcacgggactcaagaag
cgcgagtccctgcaggcccgcctggccttcgccaaccaggtcctggatgagatcctggac
tcggccgaccagcccatgacgggccgcaagtggtggatggacgcggatgagccctggcag
actctggcctgctgcatggaggtggcgcgtgcagtgcgggccccggaccccgctacctac
atctcccacttccccgtgcaccaggatggctcctgcaatggcctgcagcactatgccgcc
ctgggccgtgacagcgtgggcgccgcctctgtgaacctgttgccctccgagctgccacag
gacgtttacagcggtgtggctgcgcaggtggaggtgttccgcagacaggacgcggagcag
ggcgtgcgggtggcccaggcgttagagggcttcgtgagccgcaaggtggtgaagcagacg
gtgatgacggtggtgtacggcgtcacgcgctacggcggtcggctgcagatcgagaagcgg
ctccgggagctgcaggacttcccgcaggagctggtgtgggaggcctcccactacctggtg
cgccaggtgttccacagcctgcaagagatgttctcggggacccgggccatccagcattgg
ctgaccgagagcgcccgcctcatctcgcatgctggctcagctgtggagtgggtcacgcct
ctgggcatccctgtcatccagccctaccaccgcgactccaagatgcaggtcagaggtggg
atccagaacttgacgtgccgcagcagctgggacagcagccagaagcccaacgtgctgaaa
cagaggaacggctttccgcccaacttcatccactcgctggactcgagccacatgatgctc
accgccctgcactgctacaggaagggcctgaccttcgtgtccgtccacgactgtttctgg
acccacgcggccgacatcccggtcatgaaccaggtgtgccgggagcagttcgtgcagctg
catcggcagcccatcctgcaggacctgtcccgcttcctcgtgcagcgcttctgcgccagc
ccgccaagggggcagaagctgtcacagcacatccaatacacaaggttgctggagacactg
caggctgtacctgagacaggcgccttcgacctggagcaggtgaaggattccacctacttc
ttcagctga
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