Ochotona princeps (American pika): 101527715
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Entry
101527715 CDS
T07609
Symbol
BDP1
Name
(RefSeq) transcription factor TFIIIB component B'' homolog
KO
K15198
transcription factor TFIIIB component B''
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opi03021
]
101527715 (BDP1)
Transcription machinery [BR:
opi03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
101527715 (BDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
DUF4359
Motif
Other DBs
NCBI-GeneID:
101527715
NCBI-ProteinID:
XP_036353475
LinkDB
All DBs
Position
11A:complement(23988467..24067402)
Genome browser
AA seq
2137 aa
AA seq
DB search
MIRRARLSVKPNVRPGVGARAAGTAVLPRGREPRRPPEPAEPAEPAEPPEVPEPPEVPEP
PEAPAAEPPEKAPERSDEKIDGGNDVEESSQPPAVPQRRKRVSGTSGVLQADVTVPSERP
PVSTANEDAAQPDPVPAKEKPPCSDRYRIYKAQKLREMLKEELRKEKKQWKNKCAISECQ
KPLDRSKMTMRDFIYYLPESNPMTCKNKFKREERTNGWRIDKAFQEKRPFDFDFFAHLLQ
KVLAEEEKRKQKSGKSHSVKEKEASKSTKHVKAKKVASEDAIDGAEESVSVDGCAGSPKG
AQAAPEETASSGQATEQAVSGQELNQKKRRRKTKDETNNKEVKSPSGSGMVQSGLSKGEK
RKSKSLSLEPAETESVCGERQELSCVQSVDASLCPVSGQETPEDTDASLPFSDHQGALAA
AGESSDFSPSGVEVSAACAPNNAEAGCAEETDVGTKNKSADTEQTENVKPVARGRLQRPK
PSLSRALGKKAVLSQDKTGAERKSSLSETSVETSHVEKATMPMCDVDGMEHPESESLPAE
PASELNEKACLQEVNSPKALKPARLTRGRLQRPKPNVAKVTERKPQTSQEKPGAAAEETQ
AASCVDGGISQQVEDQSRENVECGDVTSGPETKDNSGEIPSDEPQAVSDSLSVQENDETN
IRKQVPSQRSRFQKAKPNIVRGAARREICSKAVVPEEVLVSEEMTASLRETVRPDSLPSG
EAPVEVSAVQELESCPREAGGSILSPREKIPEMDDVIVDMEVSSEISARETSLGEEVSEV
RDVTGGADTAVQDAHTGEGPPQEDLPEEVTVTVDTEADLNRVERQVPPSEMLPEMTDAMD
ETEEVLEGTELSTQIKAPEGIRTTGDMETDPEGIREVSQRENVLVEASEEMEFHLEELGK
KDISLSEEVPGKLTAVQHAGATWEQTGRAVSLEERPSENMIVLEGAGEEKPEETSPAGEA
KLDSLQSSSADRRATVPLPGPESAGREVLSGKCSTAVEESRDSGKEGSSPFPDVETCSQI
SADVSEKDERELHPPDVGKQFSDGTLSISLPQEQKPVEVKPAPFVRSRFKRPKPNLARAV
LKREAAEAAKCVPGEESETGTTEAGAAPRDGQQAHTRPCKHAVASLVTSREKDASARLPW
SEPAKGQSPPASPEPAESAQSAPIQPHDAIASSGIQSKNAIQQERKENVAQTVQPIRGRL
QRPRPNLRKAGQREIQKGEASSVIQKETAILKNDDANEKSLYVPNSQIGAEIEAVSSKVS
ECRIYENEGPDVVPTEDAQVDKINILAEEMRFRMGSFYCFDMFVVFGLFCFCVITVNVPD
MECVVVVEPQLPNTDVTAQEMKQEENGNVPSLEVTSSVHTQDEPGTNDGSAEAAIALLTM
GDLVLQSEIGAERGDAGVCVLADAHLEEKSHAPFSPDNVHVRVDAECRGPASPVTSTALE
SLEENKIVLEEQSTREEVGLVEKVKATATATSSIVSKMTSNLRMRSRFAKPKPNLKQASR
TSRMLKEDASLCVTQEVVTETQIETEESASETAEVEDKSLGPMPVAGSGQQSRVECARAR
SETGAAQEAHAAERNEEEEEGSELVLVPPVAPLVSSLEPAVPMLAASQSSGEGPLRQESA
GDSVLAVQVPQVTDVSWNWGLIAADIRPEDEQAFILTLVEIPASAAAEFTDTTAQSVPAS
LLPAPILVTSASSDERADGSVNLPVTSLHQGAMYLPVSGRDGSEKSPANLDLTTRKRFHC
SLEESDQVPPAKKSSLTSRILRQEYASGLGESCKRRAASPTLGSSLHPDPPKEHLESACR
GLVSGTVSEITNPHGEKSVLQCPRVEVTQEERTDAACASPQVENKPATKPPLSRPHRKPL
GFLSLICSKKTSLGSDEPTQVHRKKRLKPLIPAARQNVKRSDPPSEIQETRQESCDTLPA
PSVEAGSQPQETRQESCDTLLAPNADAGSQPQKTRQESHDTLLTLNAKVGYQSQETRRES
HDMLLAPNADAGSQPQETRQELHDALPAPSVDARSQPQETRRDSCDALPAPSVDARSQPQ
ETRQDSCDALPAPSVDARSQPQETRQESRDTLPAPNANAGSQPENPGESAAQVQVSCDKV
LLREERQSGQHAAPAEEPTTVAEYFFNDIFIEVDEAE
NT seq
6414 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcagggcacgccttagcgtgaagccgaacgtcagaccgggtgtcggtgccagg
gccgccggcaccgccgtccttccgcgtggacgggagccccgcaggccgccagagcccgcc
gagcccgccgagcccgccgagccccccgaagtccccgagccccccgaagtccccgagccc
cccgaagcgcccgcggccgagcccccggagaaggcgcccgagcgcagtgatgaaaagatt
gatggtgggaatgatgttgaagaatccagtcaacctcctgccgttccgcagagaagaaag
cgagtgtcgggcacgtctggtgtccttcaggcagatgtcacggttccttcagaacgtcct
cctgtgtccaccgctaacgaggatgctgcacagccagaccccgttccggcaaaggagaag
ccgccgtgctcagaccgctaccgaatatacaaagcccagaagctgcgggagatgttaaaa
gaagagctgcgcaaggagaagaaacagtggaagaacaaatgtgctataagtgaatgtcag
aagcctctggatcgttcaaaaatgactatgagagacttcatatattacctaccagagagc
aatccaatgacatgcaagaataaatttaaacgtgaagaaagaacaaatggctggagaatt
gataaagccttccaggaaaagcgtccttttgacttcgatttttttgctcatttgcttcag
aaagttcttgctgaggaagagaaaagaaaacaaaaatcgggtaaaagccacagtgtaaag
gagaaggaggcttccaaatcaacgaaacacgtgaaagcaaaaaaagttgccagtgaagat
gccatcgatggagcggaggagtcagtgagcgtggacgggtgcgcaggctctcccaagggt
gctcaggcagcgccagaagagactgcgagctcgggacaggctacagaacaggctgtgtct
ggtcaggagctgaatcagaagaaaaggagaagaaagactaaagatgaaactaataacaaa
gaagtaaaaagtccttcaggaagtgggatggtacagtctggcctttctaaaggagaaaaa
cgtaagagtaagagcttgtcactcgagcctgcagaaacagagtctgtgtgcggtgagagg
caggagttgtcctgtgtgcagagtgtggatgccagcctatgcccagtctctggccaggaa
accccagaggacacggacgccagccttccgttcagtgatcaccaaggggccctggcggca
gcaggtgaatcttcagacttctctccgtcaggagttgaagtttcagcagcgtgtgcacca
aataatgctgaggctggctgtgcagaagaaacagatgttggcacaaagaataaatcagcg
gatacagagcagacagaaaatgttaaaccggtagcgagaggtcggcttcagagacctaaa
cccagtctatccagggcacttgggaagaaagctgttctttcacaagacaaaacaggtgcc
gagaggaagagttcactttctgaaacttctgttgaaacgagtcacgtggaaaaggccacg
atgccgatgtgtgacgtggatggaatggagcatcctgagagcgagagcctgccagccgag
cctgcctctgagctgaatgagaaagcttgtcttcaggaagttaattcacccaaagctttg
aaacctgcacgactcacaaggggccgactgcaaagaccaaagccgaatgttgctaaagtg
actgaaagaaagcctcagacatcgcaagaaaaacctggagccgctgcagaagagactcag
gctgcatcctgtgttgatggtggtatttctcaacaagtggaagatcagtcacgtgagaat
gtggagtgtggagacgtcacatccgggcctgagacgaaagacaattctggggagataccg
tcagatgagccccaggctgtcagtgactccctgagcgttcaagagaatgatgaaaccaat
atacgcaaacaagtccccagtcaaaggtctagatttcagaaagcaaagccaaatatagta
agaggagctgcaagaagagaaatttgttcaaaggcagtggtccccgaggaggttcttgtc
tctgaggaaatgacagcatctttgagagaaaccgtgagaccagacagcctgccaagcggg
gaggcgccggtggaggtctctgctgtgcaggaactggagtcatgtccaagagaagctgga
ggaagcatcctctctccaagggagaaaataccagaaatggatgacgtcatcgtcgacatg
gaagtgagctcagaaattagtgcaagagagacttcgctcggggaggaggtgtccgaggtg
agagatgtcaccgggggcgcagacacggctgtgcaggatgcccacacaggagagggaccc
ccacaagaagacctcccagaggaggtcacagttacagttgacacagaggcagatttgaac
cgcgttgaaagacaagtgcccccaagtgagatgttaccagagatgaccgatgccatggac
gaaacagaggaagttttggaaggaacagagttgtccacacagatcaaggcccctgagggg
atcagaactacaggcgacatggaaacagatccagaaggaattcgagaagtttcccaaagg
gaaaatgtactggtggaggccagtgaggaaatggagtttcatttggaagaacttgggaaa
aaagacatttccctatcagaagaggtaccaggaaagctaactgctgtccagcacgcaggg
gcgacgtgggagcagactggaagagcagtgtccttggaggagagaccctctgagaacatg
attgttcttgagggagcgggggaggagaagcccgaggagaccagccccgctggagaagcc
aagttggattcactgcagagcagcagtgcagaccggagagccaccgtgcctctccccggt
ccagagagcgctgggcgtgaagtgctgtcggggaagtgttcaacggctgtagaagaaagc
agagattctgggaaggaaggatcgagtccgttccctgacgtggagacctgctcacagatt
tctgccgacgtcagtgaaaaagacgagcgggagctgcaccctccagatgttgggaagcaa
ttttcagatggcaccttaagcatctctcttcctcaagaacagaagccagttgaagttaaa
ccggcaccttttgtgagaagtcgattcaagaggcccaaaccgaacctagcaagagcagtg
ttaaagagagaggctgcggaggcagcaaagtgtgtacctggagaggaatccgagactggt
acaacggaggccggtgcggcaccgcgggacggtcagcaagctcacacccggccttgcaaa
catgctgtggcttccctcgtgacatcaagagaaaaggacgccagtgcaagactgccctgg
tcagagcctgcaaagggccagtcacctccagcctcccccgagcctgcagagagcgctcag
tcagcaccaatccagccacatgatgccatcgcttccagcggaattcagagtaaaaatgct
attcaacaagaaaggaaggaaaatgttgcccaaactgttcaaccaataaggggccgactt
cagagacccagaccaaatttaagaaaggctggacaaagagagatacaaaaaggtgaagcc
agcagtgtgattcagaaagaaacagcaattttaaaaaatgatgacgctaacgagaagtcc
ctgtatgtgccaaattcacaaattggagctgaaattgaagctgtgtcctccaaagtttca
gaatgcagaatttatgaaaatgaaggtcctgatgtggttcctacagaagatgctcaagtt
gacaaaataaatattttagctgaagagatgagatttcgaatgggaagtttttattgtttt
gatatgtttgtggtttttggcttgttttgtttttgtgtgattaccgtgaatgttccagac
atggagtgcgtcgtggttgttgaacctcagctcccgaacacagatgtgacagctcaggaa
atgaaacaagaggaaaatgggaatgtaccatcacttgaagtgaccagcagtgtccatacc
caagatgagccaggtaccaacgacggaagtgctgaagccgccatagctttacttacaatg
ggagatctagtgttgcagtcagagatcggtgccgaacggggggatgcaggtgtgtgtgtg
cttgctgatgctcatttggaggagaagagccatgctccctttagtccagataatgtccat
gtcagagtcgatgctgagtgtcggggtcctgcttcacctgtcaccagcacagctctggaa
tcgcttgaagaaaacaagattgtgttggaggaacaaagtacgagagaagaagttggtcta
gtggaaaaagtcaaggcaactgccacagcaaccagtagtatagtatctaaaatgaccagt
aatttgagaatgagaagcagatttgccaagccgaaacccaatcttaagcaagcttcacgg
accagcaggatgcttaaggaagatgccagtttgtgtgtaacccaagaggtagtaacagag
actcaaattgaaacagaagaaagtgcttccgaaacagcagaagtggaagataaaagcctt
ggaccaatgccagtagcagggagtgggcagcagagcagggtggagtgcgcccgtgcccgc
agtgagacaggtgctgcccaggaagcacacgcagctgaaagaaatgaagaggaagaggaa
ggttcagaattggtgctcgtgcctcctgttgctccgctcgtttcctccttggagccagct
gtgcccatgcttgccgccagccagagctctggtgaggggcccctgaggcaggagtctgca
ggagacagcgtgctcgccgttcaagtgccgcaggtgacggatgtcagctggaactggggc
ttgatagctgctgacatccgtccagaagatgagcaggcattcattctgactctggtggaa
atcccagccagcgcagccgcagaatttactgacaccactgcccaatcagtgccagcctcc
ttgctgccagcacccatcctggtcacgtcagccagctctgacgaaagggctgacgggagt
gtgaatttaccagtaacatcacttcaccaaggtgccatgtatttaccagtttctggaaga
gatggttctgagaagtctcctgctaatttggatctcaccactaggaagagatttcattgc
agccttgaggagagcgatcaggttccccctgccaagaagagttcactcacttcaagaatt
cttcgtcaagaatacgcctctgggttgggggagtcttgtaagcgtcgagctgcttccccc
accctgggaagctcactgcatccagaccctccaaaggaacacctggaatcagcttgccga
ggtctagtgtctggaactgtcagtgaaatcaccaatccacatggcgagaaaagtgtgctt
cagtgtcctcgggttgaggtgactcaggaagaaagaacggatgctgcttgtgcgtccccg
caggtggagaacaagcccgccacgaaaccgcccctgtccagacctcacagaaaacccttg
ggatttttgtctttaatatgttcaaaaaaaaccagtctggggtctgatgagcccactcaa
gtccatagaaagaagcgcctaaaacctctgatccctgcagcaagacagaatgtgaagagg
tctgacccaccaagtgagatccaggagaccaggcaggaatcctgtgacacgctgccagct
ccgagcgtcgaggccgggtcccagcctcaggagaccaggcaggagtcctgtgacacgctg
ctggctccaaacgccgatgctgggtcccagcctcagaagaccaggcaggaatcccatgac
acgctgctaactctgaacgccaaggttgggtaccagtctcaggagaccaggcgggaatcc
catgacatgctgctagctccaaacgccgatgctgggtcccagcctcaggagaccaggcag
gaattgcatgacgcgcttccagcaccaagcgtggatgccaggtcccagcctcaggagacc
aggcgggattcctgtgacgcgcttccagctccaagcgtggatgccaggtcccagcctcag
gagaccaggcaggattcctgtgacgcgcttccagctccaagcgtggatgccaggtcccag
cctcaggagaccaggcaggagtcccgtgacacgcttccagctccgaacgccaatgccggg
tcccagcctgagaatcctggcgagtcagcggctcaggtgcaggtgtcctgtgataaagtc
ctactgagagaggaacgtcagagtgggcagcacgcggcgcccgccgaggagccgaccacc
gtcgctgagtatttcttcaacgatatcttcatcgaggtggatgaagcagaatga
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integrated database retrieval system
