Ochotona princeps (American pika): 101527717
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Entry
101527717 CDS
T07609
Name
(RefSeq) ATP-binding cassette sub-family A member 17-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
opi
Ochotona princeps (American pika)
Pathway
opi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101527717
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
opi02000
]
101527717
Transporters [BR:
opi02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
101527717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
Motif
Other DBs
NCBI-GeneID:
101527717
NCBI-ProteinID:
XP_004587085
LinkDB
All DBs
Position
6:6880178..6945499
Genome browser
AA seq
1530 aa
AA seq
DB search
MAAFKKLKLLLWKNFILKKRKTLVSILEILMPFLFCGIILYLRCNSVSRKRAPSNYSAFD
ISTLPEFFYNYPQKSVLQLAYIPSKSETLRTITERVKQSFDVDLGVLGFPSVPVFENFII
KEQKAFYILTGIVFHHRFINNSEPLPLVVKYTLRFSYIQRNVLPVKNLFVLRDNPEGWCT
SFLYPPNPRQEPRAFTQEDGGNPGYNREGFLAIQHAVDKAIMWQHAQTAAVSLLDSLSVL
LKRFPYGPFIQDKFFLVLQNDFPLLLMLSFICFELIIINSISLEKERKLKEYMCMMGLDN
WLHWVAWFILFFVSVSVAVLVMTILFCVEVNGVAVFRNSEPTLIFIFLMCFATATIFFAF
MISTFFQRAHVGTAVGGIVFFLTYLPYLYLGFNYSQRSPLQKIFLCLFSNVAMAVGVRLI
ATLEAEGVGLQWKRVGSVRAEFNFSHVLLMLLLDSVLYCLVAWYVEAVFPGKFGTPKPWY
FFLKRLLPVELPEKSPTRRFFQEEPSNLMKGIEIQHLYKVFHKGRNEHVAVKGLTMNLYR
GQITVLLGHNGAGKTITCWMLTGLTPCSSGRAYINGYEISRDIAQIRKSLGWCPQHDILF
DNFTVGEHLFFYAQLKGLSRHKCPEEVKQMLHVLGLEDKRHTRCKLLSGGMKRKLSIGIA
LIAGSKVLILDEPTSGMDAISRRAVWDLLQQQKTDRTILLTTHFMDEADLLGDRIAIMAK
GELQCCGSPLFLKQKYGSGYYITLLKTPQCDTEALSHLIYYHIPNAVLESSAGEEIIFIL
PKESMHRFESLFNSLELQQTELGIASFGASVTTMEEVFIRVCTLADSAINALSSKRSSLR
PHPMTSRVPVDRIKQIHSRIYSIHPGLPVRLNTGFFLLCQQFYAMFLKKALYSWRNWMLI
LSIQMLVPLVIIMLSLFFFNLRVENMASVPLELSLKTYGQTVVPFSVPQNSRLDPQLSER
FASMLVAEGQIPLKVPGSIETFLLKKAKEKPEDFNKFYLVAASFRDEGNHTTVTALFNNQ
AYHSPALAVTMVDNFLFKLLSGAGASIRTSNYPQPQSEMEISENVLYQGPKGHYLVVNLL
FGVAFLSSSFSILIVRERRIKAKHIQFVSGIYLVAYWLSALLWDLISFLVPTLLMVVVFL
YYKEDVFTRYENIAALVSMLLLYGWATVPFIYIVSFSFESASHACMKLVIMLTFLSIGPI
LLVRVTAEQGKRHGSRVSLPQLHKVRKWVGYCPQFDALLNFMTGRESLVMYARIRGIPER
QIAACVNQILEDLVLHMDADKLVKTYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVA
RRLLWDTVARARESGKAVIITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGY
SLQAKVRSKGQQEALEAFKAFVELTFPGSILEDEHQGMVHYHLPSHGHSWAKVFGILEQA
RNKYQLDDYSVSQVSLEDIFLSFTYPVYSAQAHGQQLGYEAFSESLDHAFLVLPGHCLGM
AFCNLYYNFELQQLCSIKNLSQVECSEACE
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttcaagaagctaaaacttcttctctggaagaatttcatcttaaagaagcgg
aagaccctggtctcgatccttgaaatcttgatgccgtttctgttctgtggaatcatactg
tatcttcgttgcaacagtgtctcaagaaaaagggctccatctaactacagtgcctttgat
atcagcacactgccagaattcttctacaattaccctcagaaaagtgtacttcagctggcc
tacatcccttccaagagtgagacgctgaggaccatcacggagagggtgaagcagtccttc
gatgtggacttgggagttctaggtttcccttcggtgcctgtgtttgaaaatttcataatt
aaggaacaaaaggctttctacattttgacaggaatcgtttttcaccatagattcattaac
aacagcgaacctttgccacttgtggtgaagtacaccttgcgcttcagttacatccagagg
aatgtattgccagtcaagaatttgtttgttttgcgtgataaccctgaaggctggtgcaca
tccttcctttatcctccaaatccacgccaagaaccacgggcattcacgcaggaagatgga
ggaaaccctggatacaacagagaaggcttcctggccatacagcatgctgtggacaaagcc
atcatgtggcagcatgcccagaccgcggcagtcagcctgttggacagccttagcgtgctc
ctgaagagattcccttatggaccctttatccaagacaagttcttcctggttctccagaat
gatttcccgctgctcctcatgctcagcttcatctgttttgagctcattatcatcaattcc
atttcactggagaaagagagaaaactgaaggagtatatgtgtatgatgggactggacaac
tggctgcactgggttgcttggttcatcttgttctttgtttccgtctccgttgcagttctt
gtcatgaccattctcttctgtgtagaggtgaatggtgttgcagtgttcaggaatagtgaa
cccactttgatatttatttttctaatgtgttttgccactgctacaattttctttgcattc
atgatcagcacattcttccaaagagcccatgttggaactgctgtgggaggcatcgtcttc
ttcctcacctacctgccgtacctgtacctcggcttcaactactcgcagcggagcccgctc
cagaagatcttcctgtgcctcttttccaacgtggccatggcagtgggagtccgactcatc
gctaccttggaggcagaaggtgtaggtttgcagtggaagagagtgggcagtgtccgtgca
gagtttaactttagccatgtgctgctgatgctcctgctggattctgtcctctactgcttg
gtggcctggtatgtggaggccgtcttcccagggaagtttggtacacctaagccatggtac
ttctttctcaagagactgctgcctgtggagcttcctgaaaagtctccgacacgcaggttc
tttcaggaagaacccagcaacctgatgaaggggattgagatccaacatctgtacaaggtg
tttcacaaaggaaggaatgagcacgtagcagtgaaagggctcacaatgaatctctacaga
gggcagatcacggtgctgctgggacacaacggagcggggaagaccatcacctgctggatg
ctcacaggtcttactccctgttccagtggacgggcgtatatcaatggatacgaaatttca
agagacatagctcagattaggaagagtctgggctggtgcccccagcatgacatcctgttt
gataactttacagtgggggagcatctctttttctatgcccagctgaaaggcttgtcgcgc
cacaagtgccccgaggaggtcaagcagatgctgcatgtgctcggcctggaggacaagcgc
cacacccggtgcaagctgctgagtggggggatgaagcgcaagctgtccatcggcatcgcc
ctcatcgcgggctccaaggtgctgattctggacgagcccacctcaggcatggacgccatc
tccaggagggctgtctgggacctgctgcagcagcagaaaactgaccgcaccatcctgctg
accacccacttcatggacgaggctgacctgctgggggaccgcatcgccatcatggccaag
ggggagctgcagtgctgtgggtccccactgttcctcaagcagaaatatggttcaggatac
tatatcactttactgaagacaccacagtgtgacacggaggcactttctcacctgatttat
tatcatatacccaatgctgtgttagagtccagtgctggagaagaaataatattcatactc
ccgaaagagagtatgcacaggttcgaatctcttttcaacagcttggagctgcagcagaca
gagctgggcatcgccagcttcggcgcctcagtcaccaccatggaggaggtgttcattcgg
gtttgtactttggcagattccgctataaatgccctgagcagcaaacgttcgtctctccgc
cctcacccgatgacgagcagagttcctgttgacagaattaaacagatccattccaggatc
tactcaatccaccctggcctcccagtcagactaaacaccgggttctttcttctctgccag
caattctatgccatgttcctgaagaaagcgctgtattcttggcgcaactggatgctgatt
ttgtcgatccagatgctggtgccgctggtgatcattatgttaagtctcttctttttcaac
ttgagagtggagaacatggccagtgttcccctggagctcagcctgaaaacgtacggtcag
accgtggtcccattctctgttcctcagaattccaggttggatcctcaactttcagaacgc
tttgcaagcatgcttgtggctgagggacagattcctctgaaagtcccaggttcgatagag
acgttcctattgaaaaaggccaaagagaaacctgaggattttaataagttctacctcgtg
gcagcctccttcagagacgagggcaaccacaccaccgtgaccgcgctgttcaacaaccag
gcgtaccattcccctgctctggccgtgactatggtggacaacttcctcttcaagctgctc
tccggtgccggggcttccatccgcacatccaactacccgcagcctcagtcggagatggag
atatccgagaatgtcctgtaccagggccctaaagggcattacctcgtggtcaacttgctc
tttggagtcgcttttctgtccagctccttttccatcttgattgtgcgggagaggcggatc
aaagccaagcacatccagtttgtcagtggcatttacttggtggcttactggctctctgcc
ctgctctgggacctcatctccttccttgtccccacgctgctgatggtggtggtgttttta
tactacaaagaagacgtgttcacacgctatgagaacatcgctgcgctggtctccatgttg
ctcctgtacggatgggccacggtgcccttcatatacattgtcagcttctcctttgaaagc
gccagccacgcctgcatgaagctggtcatcatgctcaccttcctgagcatcgggcccatc
ctgctcgtcagagtcacagcagaacagggtaagcgccatggcagccgtgtgtccctgcca
cagctgcataaggtgcggaagtgggtcggctactgtccccagtttgatgctctgctgaac
ttcatgacaggccgtgagtccctagtcatgtatgcccgcatccggggcatccctgagcgc
cagatcgctgcctgtgtgaatcagatccttgaggacttagtgttgcacatggacgctgac
aagctggtgaagacctacagcggggggaacaagcgcaaactaagcacaggcattgccctc
atcggagagcccgccgtcatcttcctggacgagccgtccactggcatggaccccgtggcc
cggcgcctgctctgggacaccgtggcccgcgcccgtgagtccggcaaggccgtcatcatc
acctcccacagcatggaggagtgtgaggccttgtgcacccggctggccatcatggtgcag
ggtcagttcaagtgcctgggcagcccgcagcacctcaagagcaagtttggcagcggctac
tccctgcaggccaaggtccgcagcaaggggcagcaggaggcgctggaggcgttcaaggcg
tttgtggagctgaccttcccaggtagcatcctggaggacgagcaccaggggatggtccat
taccacctgcccagccatggccacagctgggcgaaggtgtttggcatcctggagcaggct
aggaacaagtaccagctggatgactactcggtcagccaggtctccctggaggacatcttc
ctgagcttcacctaccctgtgtattctgcgcaagcgcacggccaacagctcggttacgaa
gcattctcggagtccttggatcatgcgttcctggtactccccggccactgcctgggcatg
gctttctgcaacttgtattacaactttgaactgcagcagttgtgcagcatcaagaacctg
agccaggtcgagtgcagtgaagcttgtgagtag
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integrated database retrieval system
