Ochotona princeps (American pika): 101527772
Help
Entry
101527772 CDS
T07609
Symbol
POU5F1
Name
(RefSeq) POU domain, class 5, transcription factor 1
KO
K09367
POU domain transcription factor, class 5
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
101527772 (POU5F1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101527772 (POU5F1)
03021 Transcription machinery [BR:
opi03021
]
101527772 (POU5F1)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
101527772 (POU5F1)
Transcription machinery [BR:
opi03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
101527772 (POU5F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Bindin
AcnX
HOCHOB
Motif
Other DBs
NCBI-GeneID:
101527772
NCBI-ProteinID:
XP_004598784
LinkDB
All DBs
Position
12:complement(29342819..29347901)
Genome browser
AA seq
360 aa
AA seq
DB search
MAGHLTSDFSFSPPPGGGGDGPGGPEPGWVDPRAWLSFQGPPGGPAIGPGVGPGSELWGL
SGCPPPYDFCGAMAHCAPQLAVGLVPQGGLESSQPEGEAGAGVGSISEGTSPEPGAAPPG
AVKIEKEKMEQNSEESQDIKALQKDLEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFS
QTTICRFEALQLSFKNMCKLRPLLQKWVEEADNNENLQEICKAETLVQARKRKRTSIENR
VRGNLESLFLQCPKPSLQQISHIAQQLGLEKDVVRVWFCNRRQKGKRSSSDCSQREEYDA
AGSPFPGAPVSFPLAPGPHFATPGYGSPHFTTLYSSVPFPEGEGFPAVPVAALGSPMHSN
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggcgggacacctgacttcggacttctccttctcgccccctcctgggggtggcggcgat
gggccgggagggccggagccaggctgggtggaccctcgagcctggctgagcttccaaggc
cctcccggtgggcccgccatcgggccgggagttgggccggggtcggagctgtgggggctc
tccgggtgccccccgccgtacgacttctgtggagccatggcgcactgcgcaccgcagctc
gccgtgggcctcgtgcctcaaggcggcctggagagctctcagccggagggcgaggcaggg
gccggcgtggggagcatctccgaggggacctccccggagcccggcgctgccccacctggt
gccgtgaagatcgaaaaggagaaaatggagcaaaactctgaggagtcccaggacatcaaa
gctctccagaaagatctggaacagtttgctaagcttctgaagcagaaaaggatcactttg
gggtacacccaggctgacgtggggctcaccctgggagttctctttggaaaggtgtttagc
caaacgaccatctgcagatttgaggccctgcagctcagcttcaagaacatgtgtaagctg
cggcccctgctgcagaagtgggtggaggaagctgacaacaatgagaaccttcaggagatt
tgcaaagctgagaccctggtacaggctcggaagagaaagcgaacaagtatcgagaaccga
gtgagaggcaacttggagagcctgttcctgcagtgcccaaaaccctcgctgcagcagatc
agccacatcgcccagcagctggggcttgagaaggacgtggtccgagtgtggttctgtaac
agacgccagaagggcaagcgatcaagcagtgactgttcccaacgagaggagtatgacgcc
gctggatctcccttcccaggggcacctgtctcttttcctctggctccggggccccacttt
gctaccccaggctatggcagccctcacttcaccacgctgtactcctcggttccttttcct
gagggggaaggcttccctgcagtacctgttgctgctctgggctctcccatgcattcaaac
tga
DBGET
integrated database retrieval system
