Ochotona princeps (American pika): 101527820 Help Entry 101527820         CDS       T07609                                  Symbol COL4A6 Name (RefSeq) collagen alpha-6(IV) chain   KO K06237   collagen type IV alpha Organism opi  Ochotona princeps (American pika) Pathway opi04151   PI3K-Akt signaling pathway opi04382   Cornified envelope formation opi04510   Focal adhesion opi04512   ECM-receptor interaction opi04518   Integrin signaling opi04820   Cytoskeleton in muscle cells opi04926   Relaxin signaling pathway opi04933   AGE-RAGE signaling pathway in diabetic complications opi04974   Protein digestion and absorption opi05146   Amoebiasis opi05165   Human papillomavirus infection opi05200   Pathways in cancer opi05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:opi00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     101527820 (COL4A6)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     101527820 (COL4A6)    04518 Integrin signaling     101527820 (COL4A6)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     101527820 (COL4A6)   09142 Cell motility    04820 Cytoskeleton in muscle cells     101527820 (COL4A6)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     101527820 (COL4A6)   09154 Digestive system    04974 Protein digestion and absorption     101527820 (COL4A6)   09158 Development and regeneration    04382 Cornified envelope formation     101527820 (COL4A6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     101527820 (COL4A6)   09162 Cancer: specific types    05222 Small cell lung cancer     101527820 (COL4A6)   09172 Infectious disease: viral    05165 Human papillomavirus infection     101527820 (COL4A6)   09174 Infectious disease: parasitic    05146 Amoebiasis     101527820 (COL4A6)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     101527820 (COL4A6)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:opi04147]     101527820 (COL4A6)    00536 Glycosaminoglycan binding proteins [BR:opi00536]     101527820 (COL4A6) Exosome [BR:opi04147]  Exosomal proteins   Exosomal proteins of other cancer cells    101527820 (COL4A6) Glycosaminoglycan binding proteins [BR:opi00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    101527820 (COL4A6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  101527820 NCBI-ProteinID:  XP_012783829 LinkDB All DBs Position X Genome browser AA seq 1683 aa AA seqDB search MGKGRSHGKPPPHHPLPRVCSYIKFEDDAKSNINSIKTRRWICGGRPGPIGSQGPTGPQG FPGPSGLSGLKGERGSPGTLGPHGPTGDKGPMGVPGFLGINGIPGHPGQPGPRGPPGLDG CNGTQGAVGIPGPDGFPGLHGPPGLPGQKGSKGESAVDPGSFKGMKGNPGLPGLDGITGP QGASGSPGPAGPMGPPGLQGPPGPPGLPGPEGNMGLGFQGEKGAKGDVGPPGPAGPPPST GELEFMGLPKGKKGSKGETGPQGIPGTTGPPGFPGFGTTGEKGEKGIPGLPGPRGPMGSE GFQGPEGEQGKKGSPGFPGLNGLPGIKGEKGGIGLPGSDIFIDVNGAIISGYPGDPGVPG QPGLKGDEGIQGPRGPPGAPGLPSLPGIQGTLGPQGFSGLKGDQGNPGHTTTGPAGLPGK DGLPGLPGPRGPPGPLLGTGTLHGTEPGFPGLRGVQGPKGNPGLKGVKGDAGFCVCDGGI SNTGAPGEPGQRGPQGLMGPPGIKGIRGDPGAGGTQGPGGTPGLLGPTGPPGSKGEKGEA TLHTQSGMPGEKGDPGPQGFPGLAGAQGKDGTTGLPGVPGLPGDGGQGFLGEKGFPGQPG EKGHRGPTGLPGIGLPGLPGPRGVPGEQGRDGLPGKQGPPGSPGITLPCITSELYGPSGS PGAPGFPGPKGARGLPGTPGQPGLRGSKGTPGNPGLVHLPEMPGFPGPRGEKGLPGFPGL PGKDGLPGKAGSPGLPGSKGTPGDIFDAENGAPGKQGLEGLPGDKGLPGDSGVPGPKGLH GRSGMPGPKGERGSPGSPGHMGQPGPSGPNDLYGIKGKSGLPGAPGFPGISGSPGKRGPK GEIGHPGSTRKKGLPGLKGYSGTPGLTGRLGSPGLPGSTGMPGLVGPKGETGSIGPVGFP GIPGLPGIPGASGLKGTSGSPGKLGPFGQPGIPGEKGHRGDPGPAGTSSSRFPTLNVLFK GDKGTQGSAGSNGFPGLRGDKGEIGLPGLPGLPGTRGLSSTIKGLTGNPGLSGPTGLPGL PGLKGSRGIMGFPGMPGEDGPQGLNGIPGLTGAPGPLGSKGDQGQTFKVSGNPGPKGKAG ESGIKGQKGENGPAGDMGLTGSQGENGETGVVGDIGLPGPPGLPGITGLRGDPGLPGFSG LPGVAGPLGSSGIIGPKGSPGLPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGAKGE KGTPGIDIGVPGKPGTRGQKGGRGFPGMQGPAGAPGAPGISLPSLIVGLPGDPGRPGLDG ERGRPGPQGPPGPPGPSSDQGDSGNPGFPGIPGPQGPKGDQGIPGFSGLPGELGLRGMRG EPGFMGIPGKVGPPGDPGFPGMKGKAGPRGFPGAQGAPGQTPIAEVIHAPPGPLGLPGID GIPGLSGDPGTQGPVGLQGSKGLPGIPGKDGSNGLPGPPGALGDPGLPGPQGPAGFEGAP GKQGPLGRPGVPGQSVRVGYTLVKHSQSEQVPPCPVGMSQLWVGYSLLFVEGQEKAHNQD LGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVGQSQIPQYISRC SVCEAPSQAIAVHSQDTTIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDF RATPFIECSGVRGTCHYFANKYSFWLSTVEERQQFREEPVSETLKAGQLHTRVSRCQVCM KSL NT seq 5052 nt NT seq  +upstreamnt  +downstreamnt atggggaaagggagaagtcacgggaaaccccctccacatcaccccctgcccagggtttgc agctacatcaaatttgaggatgatgccaaaagcaacattaattctattaagacaagaagg tggatctgcggagggcgacctggaccaattggaagtcaaggtccaacaggtcctcaagga ttccctggcccttctggcttatcagggctgaaaggagaaaggggctcgccaggcactctg ggaccacatggacctacaggagataagggtcccatgggagttcctggtttccttggcatc aatgggattccgggccaccctggacaaccaggccccagaggtcctcctggcctggatggc tgtaatggaactcaaggagctgtcggaattccaggccctgatggctttcctgggcttcac ggaccacctggactccctggtcagaaaggatccaagggtgaatctgctgttgatccaggt agtttcaaaggaatgaagggaaatcctggattacctggactggatggaatcaccggccca caaggagcatctggatcacctggacctgcaggacccatgggaccaccaggattgcaaggt cccccaggaccccctggtctcccaggccctgaaggaaatatggggttaggtttccaagga gagaaaggagccaagggggatgttggcccccctggacctgcaggaccaccaccatctact ggagaactggagttcatgggccttcctaaggggaaaaaaggatcaaagggtgaaacagga cctcaaggtataccaggcacaactggacccccaggatttccaggattcggaactactgga gaaaagggagaaaagggaatccctggtttgccaggacccaggggtcctatgggttcagaa ggattccaaggtcctgaaggagaacagggcaagaaggggtcaccaggttttcccgggcta aatggactcccaggaattaagggtgaaaaaggtggcattggcctgccaggctcggacatt ttcatcgatgtcaatggtgctataatatcaggctatcctggagatcctggtgtgccaggc cagccaggccttaaaggggatgaaggcattcagggaccacgtggacctcctggtgcccca ggcctcccaagcttgccaggtattcaaggcacccttggccctcaaggattttcaggcttg aagggggaccaaggaaacccaggccataccacaactgggccagctggcctcccaggcaaa gatggtttgccagggctaccaggcccaagaggtccacctggtccgttgcttgggactgga accctacacggaacagaaccaggattccctggtctccgaggagtacaaggtccaaaagga aacccaggactcaagggagtaaaaggggatgctggcttttgtgtttgtgatggtggtatc tccaacactggagcacctggggagccaggccaacgtgggccacagggtcttatgggccct ccaggaataaaaggaatcagaggagatcctggagctggaggcacacagggcccaggaggg acaccaggtttacttgggcctacaggtcctccaggctccaaaggagagaaaggggaggca actctccatacacaatcaggaatgccaggggagaaaggtgatcctggcccccaaggattc cctggtctggcgggagcccaaggcaaagatggaacaacaggcttgccaggtgtaccaggt cttccaggtgatggtggacaaggctttctgggtgaaaaaggattcccaggacagccgggt gaaaaaggtcatcgtggtccaactggcctcccagggattggactcccaggacttcctgga cctcgtggggttcctggagaacaaggaagagatggattacccggaaagcaaggtccccct gggtctccaggtatcaccttgccttgtattacatctgaattgtatggcccatcaggatct cccggagctcctggtttcccagggcctaaaggagcccgaggcctccctggaactcctggt cagcctggattacgtggaagtaaaggaacaccaggaaaccctggcttggttcacctccct gaaatgccaggatttcctggacctcgtggggagaagggcttgcctgggtttcctgggctc cctggaaaagatggcttgcctggaaaggctggcagtccaggtttaccaggttccaagggc acccctggtgacatctttgatgctgaaaatggtgctccgggcaagcaaggcctagaggga ttgcctggagacaaaggacttccgggagactctggcgttccaggacccaagggtttgcat gggagatctggcatgccaggtcccaaaggtgagcggggcagccctggttcaccaggacac atgggccagccaggcccctcaggtcctaatgatctgtatggcatcaaaggcaaatctgga ctcccaggagcaccagggtttccaggcatttcaggatctcctggcaaaagaggcccaaaa ggcgagatagggcaccctggatccactaggaagaaaggcctacccggcctgaaaggctat tctggaactcctgggctaacaggacgcctgggaagcccaggattaccagggagtactggg atgccaggcctcgtgggcccaaagggagagacagggtccattggaccagtcggttttccg gggattccaggtctccctgggattcctggggcaagcggactaaagggaacttctggatcc cccggcaagttgggaccatttgggcagcctggtattcctggggaaaaaggtcacagaggt gatcctgggccagccggaacatcaagttcaagatttccaacactcaatgttttgtttaaa ggtgacaaaggcactcagggctcagctggctcaaatggatttcctggtcttagaggggac aaaggagaaattggactgcctggactgccaggccttcctggaactcgtggtctgtccagc accattaaagggcttaccgggaatccaggtctttctggtcccacaggactaccaggttta cctggtctcaaaggttcccggggaattatgggtttcccaggaatgccaggagaagatggt ccgcagggtcttaatgggatccctggcctcacaggagcacctggccccctaggatcaaaa ggtgatcaaggtcagacttttaaagtttctggtaatccaggacccaaggggaaagctgga gagtctggtattaaagggcaaaaaggagaaaatggaccagctggtgacatgggtttgaca ggaagccaaggtgaaaatggagaaactggtgtggtaggagacattggccttcccggtccc ccagggcttccaggaataacaggtctgagaggagacccaggacttccaggtttctcaggt ctcccaggggtagctgggcccctgggatcctccggcatcataggacctaaaggttctccc ggtcttcctggtttacatggactgaatggacttccaggcaccaagggtacccatggaact ccaggacccagcataactggagtgcctggacctgctggcttgcctggtgccaaaggggaa aagggcaccccggggattgacattggagtcccaggaaagccaggaacaagagggcaaaaa ggtggccgaggttttccgggtatgcaaggccctgctggtgctcccggtgccccaggcatc tccttaccctcactcatagtgggattgccaggcgaccccgggcgaccaggtctagatgga gaacgaggtcgtccgggtccccagggaccccctggacctcctgggccatcctcagaccaa ggcgactctggaaatcctggtttccctggaatccctgggcctcaagggcccaagggcgat caaggcattccagggttctctggcctccctggagagctaggactgagaggcatgagaggt gagcctggcttcatgggaattccaggcaaggttgggccacctggagatccaggatttccc ggcatgaaggggaaggcagggccaagaggcttccctggcgcgcaaggtgctcctggacag acgcccattgcagaagtcatccacgctcctccgggacccttagggctcccaggcattgat ggcatccccggcctcagcggtgaccctggaacccaaggccctgtgggcctgcaaggctct aaaggtttgcccggcatccctggcaaggatggctccaatgggcttcccggcccacccggg gctctcggtgatcctggcctccctggaccgcaaggccccgcaggatttgaaggagctcca gggaagcaaggccccctcgggagacctggagtgccaggccagagtgtgagagtgggctac acgttggtgaaacacagccagtcagaacaagtgcccccatgccctgtcgggatgagccag ctgtgggtgggttacagcttactgttcgtggaggggcaggagaaagcccacaaccaggat ctgggctttgctggctcctgccttccccgcttcagcaccatgcccttcatttactgcaac atcaatgaagtgtgccactatgccaggcgcaacgataaatcctactggctctccaccacc gctcccatccccatgatgccagttggccagtcccagattccacagtacatcagccgttgc tcggtgtgtgaggcgccttcacaagccatcgcagtgcacagccaggacaccaccatcccg cagtgccccctgggctggcgcagcctctggattggctattcctttctcatgcacactgcc gcaggtgccgagggcggaggacagtccctggtctcacctggatcctgccttgaggacttt cgggccactcccttcatcgaatgcagtggagtccgaggcacttgccactactttgccaac aagtacagtttttggctgagcacagtggaggagaggcagcagttcagagaggagcctgtg tctgagacactgaaggcagggcaactgcacacccgagtcagccgctgccaggtgtgtatg aaaagtctatag

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