Ochotona princeps (American pika): 101527823
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Entry
101527823 CDS
T07609
Symbol
PAX8
Name
(RefSeq) paired box protein Pax-8 isoform X1
KO
K09293
paired box protein 8
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04918
Thyroid hormone synthesis
opi05200
Pathways in cancer
opi05202
Transcriptional misregulation in cancer
opi05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09152 Endocrine system
04918 Thyroid hormone synthesis
101527823 (PAX8)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101527823 (PAX8)
05202 Transcriptional misregulation in cancer
101527823 (PAX8)
09162 Cancer: specific types
05216 Thyroid cancer
101527823 (PAX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101527823 (PAX8)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
101527823 (PAX8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
DUF6115
HTH_Tnp_IS1
HTH_SB
Ribosomal_S13_N
Motif
Other DBs
NCBI-GeneID:
101527823
NCBI-ProteinID:
XP_004590795
LinkDB
All DBs
Position
2:72251055..72305566
Genome browser
AA seq
457 aa
AA seq
DB search
MPHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSK
ILGRYYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDND
TVPSVSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTY
SINGLLGIAQPGGESKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECP
FERQHYPETYASPGHTKGEQGLYPLPLLNSTLDDGKATLTPSNTPLGRNLSTHQTYPVVA
DPHSPFAIKQETPEVSSSSSTPSSLSSSAFLDLQQVSSGVPAGASVPPFNAFPHAASVYG
QFTGQALLSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAYSHTPYSSY
GEAWRFPNSSLLSSPYYYSSTSRPSAPPTTATAFDHL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacaactccatcagatccggccatggagggctgaaccagctgggaggagccttc
gtgaatggcaggcccctgcctgaagtggttcgtcaacgcattgtggacctggcccaccag
ggtgtgagaccctgcgatatctctcgccagctccgcgtcagccatggctgtgtcagcaag
atcctcggcaggtactacgagactggcagcatccggcctggagtgatagggggctccaag
cccaaggtggccacccccaaagtggtggagaagatcggagactacaagcggcagaaccct
accatgttcgcttgggagattcgagaccggctcctggctgagggagtctgtgacaatgac
actgtccccagtgtcagctccattaacaggatcatccggaccaaagtgcagcaaccattc
aacctccccatggacagctgcgtggccaccaagtccctgagcccaggacacacgctgatc
cccagctcagccgtcacacctccagagtcaccccagtcggattccctgggctccacctac
tccatcaacgggctcctggggattgctcagcctggtggtgaaagcaagagaaagatggat
gacagtgaccaggacagctgccggctgagcattgactcccagagcagcagcagcgggccc
cggaagcacctccgcactgacgccttcagccagcaccacctcgagcccctggaatgcccc
tttgagcggcagcactacccggagacctatgcttccccgggccacaccaaaggcgagcag
ggcctctacccgctgcccctgctcaacagcaccctggacgatggaaaggccaccttgaca
ccctctaatacgcccctgggacgcaacctctccactcaccagacctaccctgtggtggca
gatcctcattcacccttcgccataaagcaggaaacccccgaggtgtccagttctagctcc
accccttcctctttatctagctccgcctttttggatctgcagcaagtcagctccggggtc
ccagccggtgcctcggtcccgcccttcaatgcctttccccatgctgcctccgtgtacggg
cagttcacgggccaggccctcctctcagggcgagagatggtggggcccacgctgcccgga
tacccaccccacatcccaaccagcggacagggcagctatgcctcttctgccatcgcgggc
atggtggcaggaagtgaatactctggcaatgcctacagccacaccccctactcctcctac
ggcgaggcctggcgcttccccaactccagcttgctgagttccccatattattacagctcc
acgtcaaggccaagtgcgccacccaccaccgccacggcctttgaccatctgtag
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