Ochotona princeps (American pika): 101527944
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Entry
101527944 CDS
T07609
Symbol
OPN3
Name
(RefSeq) opsin-3 isoform X1
KO
K04256
c-opsin
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
opi01009
]
101527944 (OPN3)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
opi04030
]
101527944 (OPN3)
Protein phosphatases and associated proteins [BR:
opi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101527944 (OPN3)
G protein-coupled receptors [BR:
opi04030
]
Rhodopsin family
Vision
Opsin
101527944 (OPN3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
Motif
Other DBs
NCBI-GeneID:
101527944
NCBI-ProteinID:
XP_004578564
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Position
16:complement(50618646..50659837)
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AA seq
397 aa
AA seq
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MYSGNRSSGQGHWEDAEESEPTGTVSPAPLFSANTYERLALLFGSLGLLGVGNNLLVLVL
YYKFQRLRTPTHLFLVNLSLSDLLVSLFGVTFTLVSCLRNGWVWDTVGCVWDGFSSSLFG
IVSITTLTVLAYERYIRVVHARVINYSWAWRAITYIWLYSLAWAGAPLLGWNRYMLDIHG
LGCTVDWKSKNANDSSFVLFLFLGCLVVPVGVIAHCYGHILYSVRMLRCVEDLQTIQVIK
ILRYEKKVAKMCFFMIFTFLICWMPYIIIRFLVVNGYGRLVTPTISIVSYLFCKSSTVYN
PVIYIFMIRKFRRSLLQLLCFRPLRCQQSSKALPAVGSEMQIRPIVMSQKDGDRPKKKVT
FNSSSIIFIITSDESLSVDDSDKASGSKVDVIQVRPL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtactcggggaaccggagcagcggccagggccactgggaggacgccgaggagtcggag
ccaaccggcacggtgagccccgcgccgctcttcagcgcgaacacctacgagcgcttggcg
ctgctgttcggctccctcgggctgctgggcgtcggcaacaacctgctggtgctcgtgctc
tactacaagtttcagcggctccgcactcccacgcacctcttcctggtcaacctcagcctc
agcgacctgctggtgtcccttttcggggtcacctttaccctcgtgtcctgcctgaggaac
ggctgggtatgggacaccgtgggctgcgtgtgggacgggtttagcagcagcctgttcggg
attgtttctattaccaccctaactgtgctggcctatgaacgttatattcgtgtggtccat
gcaagagtgatcaattattcctgggcctggagggccattacctacatctggctctactcc
ctggcatgggccggagcacctctcctgggctggaacaggtacatgctggacatacatgga
ctaggctgcaccgtggactggaaatccaagaatgccaacgactcctcttttgtgctcttc
ttgtttcttggctgcctggtggtgcctgtgggtgtcatagcccactgttatggccatatt
ctgtattcggttcgaatgcttcgttgtgtggaagaccttcagacaattcaagtgatcaag
attttaagatatgaaaagaaagtggccaaaatgtgcttttttatgatcttcactttcctg
atttgctggatgccttatataataatccgtttcttggtggttaatggctatggacgcctg
gtcacaccaacaatatctattgtttcgtatctcttttgtaaatcaagcacagtgtacaat
ccagttatttatatcttcatgatcagaaagtttcgaagatcccttttgcagcttctgtgt
ttccggccactgagatgccagcaatcgagtaaagccctgccagctgtcgggagtgaaatg
cagatcagacccattgtgatgtcacagaaagatggggacaggccaaagaaaaaagtgact
tttaattcttcctccatcatttttattatcaccagtgatgaatcattatcagttgatgac
agtgataaagccagtgggtccaaggttgatgtaatccaggttcgtccattatag
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