Ochotona princeps (American pika): 101527969
Help
Entry
101527969 CDS
T07609
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2
KO
K10140
DNA damage-binding protein 2
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03420
Nucleotide excision repair
opi04115
p53 signaling pathway
opi04120
Ubiquitin mediated proteolysis
opi05161
Hepatitis B
opi05169
Epstein-Barr virus infection
opi05200
Pathways in cancer
opi05202
Transcriptional misregulation in cancer
opi05210
Colorectal cancer
opi05212
Pancreatic cancer
opi05213
Endometrial cancer
opi05214
Glioma
opi05216
Thyroid cancer
opi05217
Basal cell carcinoma
opi05218
Melanoma
opi05220
Chronic myeloid leukemia
opi05222
Small cell lung cancer
opi05223
Non-small cell lung cancer
opi05224
Breast cancer
opi05225
Hepatocellular carcinoma
opi05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101527969 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
101527969 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
101527969 (DDB2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101527969 (DDB2)
05202 Transcriptional misregulation in cancer
101527969 (DDB2)
09162 Cancer: specific types
05210 Colorectal cancer
101527969 (DDB2)
05212 Pancreatic cancer
101527969 (DDB2)
05225 Hepatocellular carcinoma
101527969 (DDB2)
05226 Gastric cancer
101527969 (DDB2)
05214 Glioma
101527969 (DDB2)
05216 Thyroid cancer
101527969 (DDB2)
05220 Chronic myeloid leukemia
101527969 (DDB2)
05217 Basal cell carcinoma
101527969 (DDB2)
05218 Melanoma
101527969 (DDB2)
05213 Endometrial cancer
101527969 (DDB2)
05224 Breast cancer
101527969 (DDB2)
05222 Small cell lung cancer
101527969 (DDB2)
05223 Non-small cell lung cancer
101527969 (DDB2)
09172 Infectious disease: viral
05161 Hepatitis B
101527969 (DDB2)
05169 Epstein-Barr virus infection
101527969 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opi04121
]
101527969 (DDB2)
03400 DNA repair and recombination proteins [BR:
opi03400
]
101527969 (DDB2)
Ubiquitin system [BR:
opi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101527969 (DDB2)
DNA repair and recombination proteins [BR:
opi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
101527969 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
EIF3I
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_RFWD3
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
NBCH_WD40
PEP5_VPS11_N
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
101527969
NCBI-ProteinID:
XP_004585643
LinkDB
All DBs
Position
1:99263419..99280674
Genome browser
AA seq
428 aa
AA seq
DB search
MAPKKRPEAQKPLEVVLRPRSKRARSSGEPEPQAKKLSVKGCGPGRRHDSASPWAELPSL
QVPQPQPSSSLVRALHQHRLGQAAWPSMQQGLQQSFLHSLASYRIFQKAAPFDRRATSLA
WHPTHPSTLAVGSKGGDILLWNFAEKDKPTFIKGIGAGGSITGLKFNLLNTNQFFASSME
GTTRLQDFTGNTLRVFTSSDTCNVWFCSLDVSAKSRMVVTGDNVGHVVLLNMDGKELWNL
RMHKKKVTHVALNPRCDWLLATASVDQTVKIWDLRQVRGNASFLCSLPHRHPVNSASFSP
DGAQLLTTDQKSEIRVYSASHWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPD
PNFKSCAPYDLRTIDVFDGGSGKLMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIW
SQEDEARK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaagaaacgcccagaagcccagaagcccctcgaagtggtgttgcgcccccgc
agcaagagagccagaagttcgggagagccggagccccaggccaagaagctcagtgtcaag
ggctgcggtcctggcagaagacatgactctgccagcccgtgggcggagctgcccagcctg
caggtgccgcagccgcagcccagcagcagcctggtcagggccttgcaccagcacaggtta
ggccaggctgcctggccatccatgcagcagggtctccagcagtccttcttacactctctg
gcttcttaccggatattccaaaaggctgccccctttgacaggagggctacatccttggcc
tggcacccgactcacccaagcaccctggcagtgggctctaaagggggagatatcttgctg
tggaactttgccgaaaaggacaaacccactttcatcaaagggattggagctggaggcagc
atcactgggctgaagtttaaccttctcaataccaaccagtttttcgcctcctccatggag
ggaacaactaggctgcaagattttacaggcaacactctccgggtgtttaccagctcagac
acctgcaacgtatggttttgcagcctggatgtgtctgccaaaagccgaatggtggtcaca
ggcgacaacgtggggcatgtggtcctgctgaacatggacggcaaagagctctggaatctc
agaatgcacaaaaagaaagtgacccacgtggctctgaacccgcgctgtgattggctactg
gccacagcctctgtggatcaaacagtgaaaatttgggacctgcgccaggttcgagggaat
gccagcttcctctgctcactgccgcacaggcatcccgtcaattcagcttctttcagccct
gatggagcccagctcctgaccactgaccagaagagcgagatccgggtttactctgcctcc
cactgggactgccccctgggcctgatcccacatcctcaccggcacttccagcacctcacc
cccatcaaggcagcctggcatccccgctacaacctcattgtcgtgggtcgatacccagat
cctaatttcaaaagttgcgccccctacgacctaaggacgattgacgtgtttgatggcggc
tcagggaaattgatgtgccagctgtacgacccggaatcttctgggatcagttcgcttaat
gagttcaatcccatgggagacacactggcctctgcaatgggttatcacattctcatctgg
agccaggaagatgaggcacggaagtga
DBGET
integrated database retrieval system