Ochotona princeps (American pika): 101528003
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Entry
101528003 CDS
T07609
Symbol
WDR88
Name
(RefSeq) WD repeat-containing protein 88
KO
K24757
WD repeat-containing protein 88
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
opi04990
]
101528003 (WDR88)
Domain-containing proteins not elsewhere classified [BR:
opi04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
101528003 (WDR88)
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GFIT
Motif
Pfam:
WD40
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WDR55
WD40_CDC20-Fz
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
WD_LRWD1
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
101528003
NCBI-ProteinID:
XP_036348644
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Position
5:complement(13509573..13569806)
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AA seq
339 aa
AA seq
DB search
MGEDRKMPDTSHRRMPLVTLVRTFGGFKMSTPQSRQDRLLATLDPLALGKSSTPQLSSAQ
QPEPYYIQEDVWGDQEPLSKVXXKILSGHDHVVSSCHFCVDDTKLLSGSYDSTVKLWDAF
GGSVDREFENGPEAPVVECSISADSRRAHANAISNCCFTFSGHFLCTSSWDKSLKIWNVH
TGEFRNTGACVTLMRGHEGSVSSCFFARDSSFLISGGFDKTVAIWDVGEGYRKLALKGHK
DWVMDVAISRDKKWILSASKDRTMRIWNIEEIDEIPLVIKYRKAMGLKLQQCEGCDKPFS
VFESDSSTELFTKCVFCRMEERDLEIASSSQSEEHSQDN
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgggggaggacaggaagatgcctgacacttcgcaccgcaggatgcctctggtgacccta
gtgcgaaccttcgggggctttaagatgtctaccccacagtcgcgccaggaccgactgctg
gcgaccctcgacccactagccttgggcaagagctcaacaccacagctgtcatcagcgcag
cagccagagccatactacatacaggaggatgtctggggtgaccaggagcccctctccaag
gtnnnnnnnaaaattctgagtgggcacgaccacgttgtgagttcctgccacttctgtgtg
gatgacacgaagctcctgagtggttcctatgactccacggtgaagctgtgggacgctttt
ggtggatctgtggatcgggagtttgagaacgggccagaagctcctgtcgtagagtgcagc
atctcggctgacagcagaagggcacacgccaacgctatctccaactgctgcttcaccttc
agcggccacttcctgtgtacgagctcctgggacaaaagcttaaagatctggaatgtccac
acgggagagttccggaacacgggggcatgtgtgaccctcatgaggggccacgaaggctcc
gtgagctcctgcttctttgccagagatagctcttttctgatttccggcgggtttgacaag
actgtggccatttgggatgtaggagaaggctaccggaaactggccctgaagggtcacaag
gactgggtcatggatgttgccataagcagggacaagaaatggatcctgtctgcttcaaag
gataggaccatgaggatatggaatattgaagaaattgatgaaattcctctagttatcaag
tatagaaaggccatgggcttgaaactgcagcagtgcgaagggtgtgacaagcctttctct
gtcttcgagagcgactcctctaccgaattgttcaccaagtgtgtgttctgccggatggag
gagcgggacttggagatagcgtcttcctcacagtcagaagagcacagccaagataactga
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