Ochotona princeps (American pika): 101528019
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Entry
101528019 CDS
T07609
Symbol
FARSB
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101528019 (FARSB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
opi01007
]
101528019 (FARSB)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
opi03016
]
101528019 (FARSB)
Enzymes [BR:
opi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
101528019 (FARSB)
Amino acid related enzymes [BR:
opi01007
]
Aminoacyl-tRNA synthetase
Class II (U)
101528019 (FARSB)
Transfer RNA biogenesis [BR:
opi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101528019 (FARSB)
Prokaryotic type
101528019 (FARSB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Motif
Other DBs
NCBI-GeneID:
101528019
NCBI-ProteinID:
XP_004577278
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All DBs
Position
7:complement(103924508..104025555)
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AA seq
527 aa
AA seq
DB search
MPTVSVKRDLLFRALGRTYTDEEFDELCFEFGLELDEITSEKEIISKEQGNVKAKGASDV
VLYKIDVPANRYDLLCLEGLARSLQVFKERKRALVAIGAHDLDTLAGPFTYTAQRPSCIK
FKPLNKTKEYTACELMNIYKTDNHLKHYLHIIENKPLYPVIYDSNGVVLSMPPIINGEHS
KLTVNTKNVFIECTGTDFTKAKIVLDIIVTMFSEYCENQFTVEAAEVVFPNRKSHTFPEL
AYRKEIVRADLINKKVGIRETPENLAKLLTRMYLKSEVIGDGNQIEIEIPPTRADVIHAC
DIVEDAAIAYGYNNIQMTLPKTYTIANQFPLNKLTELLRHDMAAAGFTEALTFALCSQED
IADKLGLDISATQAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLKLFEISDIVI
KDSTKDVGARNCRHLCAVYYNKNPGFEIIHGLLDRVMQLLAVPAGEDRAGYVIKAAAGPA
FFPGRCAEIFAKGQSIGKLGVLHPDVITKFELTMPCCSLEINIEPFL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgtcagcgtgaagcgggacctgctgttccgagccctgggccggacctacact
gatgaagaatttgatgagctatgttttgaatttggcctggagctcgatgaaattacttct
gaaaaggaaataataagtaaagagcaaggaaacgtaaaggcgaagggagcctctgatgtt
gttctttacaaaattgacgtccctgccaaccgatatgacctgctgtgtctggaaggtttg
gctcggagtctgcaggtcttcaaagaaaggaaaagagcgttggttgctattggcgcccat
gatttggacactttggcaggcccgttcacctacactgcacagcgtccttcatgtatcaag
ttcaagcctctcaataagacgaaggaatatacagcttgtgaactgatgaacatatacaag
actgacaaccaccttaagcattacttacacatcattgaaaacaagcccctgtaccccgtg
atctacgacagcaacggcgtggttctgtcgatgcctccaatcatcaacggggaacattcc
aaattaacagtaaatactaaaaatgtgtttatcgaatgtacaggaactgactttactaag
gcgaaaatagttcttgatattattgtcaccatgttcagtgaatattgtgagaatcaattt
acggttgaagcagctgaggtagtttttcctaatcgaaaatcgcacacctttccagaactg
gcttaccgcaaggagatagtaagagctgatctgattaacaagaaagttggaatcagagaa
actccagaaaaccttgccaagctcctgaccaggatgtatttaaagtcagaagtcataggc
gatgggaatcagattgagattgaaatccctccgacccgagctgacgtcatccatgcatgc
gatattgtagaagatgcggccattgcttacggatataacaacattcagatgactcttccg
aaaacatacaccatagctaatcaatttccccttaataagctcactgaacttctccgacac
gatatggcagctgccggattcaccgaagcccttaccttcgctctgtgctcccaggaagac
attgcggataaactgggtttggatatctctgccacacaggcggtccacatcagcaatccc
aaaacagctgagtttcaggtggcgcgcactacccttcttcctggcctcctgaagaccata
gcagcgaatcgcaaaatgcccctgcctctgaaactctttgaaatttctgacattgtaata
aaagattctaccaaagacgtaggtgcaaggaactgcaggcatctctgtgctgtttattac
aacaagaaccccggctttgagatcatccacggcttgctggacagagtgatgcagctgctc
gcggtgcccgcgggggaggacagggcaggatacgtgatcaaagcggcagcaggtcctgcc
ttcttccctgggcgatgtgctgagatttttgccaagggtcaaagcatcgggaagcttggg
gtccttcatcctgatgttatcaccaaatttgagttgaccatgccctgctgctccctggaa
atcaatattgagccctttttgtga
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