Ochotona princeps (American pika): 101528089
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Entry
101528089 CDS
T07609
Name
(RefSeq) rab-interacting lysosomal protein
KO
K13883
Rab-interacting lysosomal protein
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04145
Phagosome
opi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
101528089
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101528089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101528089
Membrane trafficking [BR:
opi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
101528089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RILP
RH1
PAP1
ATG16
Motif
Other DBs
NCBI-GeneID:
101528089
NCBI-ProteinID:
XP_004594013
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All DBs
Position
19:16226221..16229241
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AA seq
374 aa
AA seq
DB search
MEPRKMVPGAQGWGPRVATGSGTAAELVYHLAGALGTELQELARRFGPEAAAGLVPLVVR
ALELLEKAVVGPTPDSLQVSAQQAELELRQLREENKHLRRELRSRPQEEHALLRQLKEVT
DRQRDELRAHSRDLQQRSLETEALQEQLQRLLLVNAELRHKLAAVQTQLRTARDRERERE
VQHQDSPELQNQGHTDGEPTCGPQPEPEHASPDSPAAAPRQVGHPSEAEQCGFSRQELEQ
ILQERNEFKAKVFLLKEELAYFQRELLADHRVPGLLLDAMKVAVRKQRKKIKAKMLGTPE
EAESSDDEDGSWLLLSSDKEDQPPSPESRIQSFFSPWYRGEAETPKPETSSTEEGGTPQP
AAVEPGGSPPAPSS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagaaagatggtgccaggggcacaaggctggggtccccgagtggccacgggg
tcggggacagccgcggagcttgtgtaccatctagccggggccctgggcacagagctccag
gagctggcgcgccgcttcgggcctgaggctgcagccgggctggtgccactagtagtgcga
gcgctggaacttctcgaaaaagccgtggtggggcccaccccggactcgctgcaggtgtca
gctcagcaggccgaactggagctgcggcagctgcgggaggagaacaagcacctccgcagg
gagttgcgttctcggccccaggaggagcacgcgctgctgcggcagctcaaggaggtgacc
gacagacagcgggacgagctccgggcgcacagccgggacctgcagcagcgcagcctggaa
accgaggccttgcaggagcagctgcagcgcctcctgctggtgaacgccgagttgcggcac
aagctggccgccgtgcagacccagcttcggacagcacgggaccgggagagggagcgtgag
gtgcagcaccaagactccccagagctgcagaaccaaggccacaccgatggagagcccacg
tgtgggccgcagccggagcccgagcacgccagcccggacagcccggctgctgccccgcgg
caggtggggcacccctcggaggcagaacagtgcggcttcagcaggcaagagcttgagcag
atccttcaggagcgcaacgagttcaaagccaaggtgttcctgctcaaggaggagctggcc
tacttccagcgggagctgctcgcagaccaccgagtccctgggctactgttggatgccatg
aaggtggctgtcaggaagcagcggaagaagatcaaggccaagatgctgggaacgccagag
gaagccgagagtagtgatgatgaggatggctcctggctcctgctctccagcgataaggaa
gaccagcccccttcccctgagtccagaatccaaagcttctttagcccgtggtatcggggt
gaagccgagactcccaaacctgagaccagcagcacggaagaaggagggaccccacagcca
gctgctgtggagcctggggggagccccccagctcccagctcctga
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