Ochotona princeps (American pika): 101528223
Help
Entry
101528223 CDS
T07609
Symbol
LRP4
Name
(RefSeq) low-density lipoprotein receptor-related protein 4
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101528223 (LRP4)
Membrane trafficking [BR:
opi04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
101528223 (LRP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
Vgb_lyase
SGL
cEGF
DUF5050
EGF_LRP2
EGF_CA
Motif
Other DBs
NCBI-GeneID:
101528223
NCBI-ProteinID:
XP_012782486
LinkDB
All DBs
Position
1:complement(98911369..98950099)
Genome browser
AA seq
1908 aa
AA seq
DB search
MALVPGPTLGLGAAARAGAGARTGLASSSECACGRSHFTCAVSALGECTCIPAQWQCDGD
NDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEQDCPPRECEEDE
FPCQNGYCIRSLWHCDGDNDCGDNSDEQCDMRKCSDKEFRCSDGSCIAEHWYCDGDTDCK
DGSDEENCPSAVPAPPCNLEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSG
EFMCDSGLCINAGWRCDGDADCDDQSDERNCTTAMCSAEQFRCRSGRCVRLSWRCDGEVD
CADNSDEENCENTGSPQCASDQFLCWNGRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTG
EENCSVHNGGCAQKCQMVRGTVQCTCHTGYRLMEDGRTCQDVNECAEEGYCSQGCTNSEG
AFQCWCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALD
FHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSR
IEVANLDGAHRKVLLWQNLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD
THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFEDSLY
WTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKNRCGENNGGCTHLCL
PSGQNYTCACPTGFRKISSHACAQSLDKFLLFARRMDIRRISFDTEDLSDDVIPLADVRS
AVALDWDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTD
AGTDRIEVANTDGSMRTVLIWENLDRPRDIVVEPTGGYMYWTDWGASPKIERAGMDASGR
QVIISTNLTWPNGLAIDYESQRLYWADAGMKTIEYSGLDGSKRKVLIGSQLPHPFGLTLY
GERIYWTDWETKSIQSADRRTGLDRETLQENLENLMDIHVFHRRRPPVSTPCAVENGGCS
HLCLRSPNPSGFSCTCPTGINLLPDGKTCSPGMNSFLIFARRIDIRMVSLDIPYFADVVV
PINVTMKNTIAIGVDPQEGKVYWSDSTLHRISRASLDGSQHEDIITTGLQTTDGLAVDAI
GQKVYWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGFMYWTDWGENAKLER
SGMDGSDRTVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVSPVQH
PYGLTLLDSYIYWTDWQTRSIHRADKGTGSNAILVRSNLPGLMDIQAVDRAQALGFNKCG
SRNGGCSHLCLPRPAGFSCACPTGILLKGDGKSCDPSPETYLLFSSRGSIRRISLDTSDH
TDVHVPVPELNNVISLDYDSVDGKVYYTDVFLDVIRRADLNGSNMETVIGHGLKTTDGLA
VDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLDEPRAIAVFPRKGFLFWTDWGHIA
KIERAHLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESADLNGKLRQVLVS
HVSHPFALTQQDRWIYWTDWQTKSIQRVDKYSGRNKETVLANVEGLMDIIVVSPQRQTGT
NACGVNNGGCTHLCFARASDFVCACPDEPDGRPCSLVPDLVPPAPRASEKSPVLPNTIPP
TLRAATSRTHTSLEEAEGRCSERDAQQGLCAHSNEAVPAVPGEGLHVSYAIGGLLSVLLI
LVVIAALMLYRHKKSKFTDPAMGNLTYSNPSYRTSTQEVKIEAIPKPAMYNQLCYKKEGG
PDHSYTKEKIKIVEGICLLAGDDAEWDDLKQLRSSRGGLLRDHVCMKTDTVSIQASSGSL
DDTETEQLLQGEQSECSSVHTAATPERRGSLPDTGWKHERKLSSESQV
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggtgccggggccgacactggggcttggggccgcggccagagctggagccgga
gccaggactggcctggccagcagctccgagtgtgcctgtggtcggagtcacttcacatgt
gccgtgagtgcccttggtgaatgtacctgcatccccgcccagtggcagtgcgatggggac
aacgactgtggggaccacagcgatgaggatggatgtatgctgcccacctgttcacccctt
gactttcactgtgacaacggcaagtgcatccgccgctcctgggtgtgtgacggcgacaac
gactgtgaggacgactcggatgagcaggactgccctccccgggagtgcgaggaggatgag
ttcccttgccagaacggctactgcatccggagcctgtggcactgcgacggggataatgac
tgcggcgacaacagtgatgagcagtgcgacatgcgcaagtgctcggacaaggaattccgc
tgcagcgacggcagttgcatagcggagcactggtactgtgatggcgatacagactgcaaa
gatggctccgacgaggagaactgtccttcggcagtgccagcgcccccctgtaacctggag
gagttccagtgcgcctacggccgctgcatcctggacatctatcactgtgatggtgatgac
gactgtggagactggtcagacgagtccgactgctcctcccaccagccctgccgctctggg
gagttcatgtgtgacagtggcctctgcatcaacgcgggctggcgctgcgacggggatgca
gactgcgacgaccagtctgacgagcgcaactgcactaccgcgatgtgttctgcggagcag
ttccgctgccgctcaggccgctgcgtccgcctgtcctggcgctgtgatggcgaggtcgac
tgtgccgacaacagtgatgaagagaactgtgagaacacaggaagcccccagtgtgcctct
gaccagttcctgtgttggaatgggcgctgcatcgggcagaggaaactgtgcaacggggtc
aatgactgtggggacaacagtgatgaaagcccacagcagaactgccggccccggacgggt
gaggagaactgcagtgttcacaacggcggctgcgcccagaagtgccagatggtgcgggga
acggtgcagtgtacctgccacacaggctacaggctcatggaggatgggcgcacgtgccag
gatgtgaatgaatgtgctgaagagggatactgcagccagggctgcaccaacagtgaagga
gccttccagtgctggtgtgaggcaggctacgagctccggcccgaccggcgcagctgcaag
gctctggggccggagcctgtgctgctgtttgccaatcgcattgacatccgtcaggtactg
ccgcaccgctccgagtacaccctgctgctcaacaacctggagaacgccatcgctctggac
ttccatcaccggcgggagctggtcttctggtcagatgtcaccctggaccggatcctccgt
gccaacctaaacggcagcaatgtggaggaggttgtgtctacgggactggagagcccaggg
ggcctggctgtggattgggttcatgacaaactctattggaccgactcggggacgtcgagg
attgaggtggccaacctggatggggcacacaggaaggtgttgctgtggcagaacctggag
aagccccgggccattgctttacaccccatggagggtaccatttactggacagactggggc
aacacccctcgcatcgaggcctccagcatggacggttctggacgccgcatcatcgctgac
acccatctcttctggcccaacggcctcaccatcgactatgcggggcgccggatgtactgg
gtggacgctaagcaccatgtcatcgagagggccaacctggatgggagtcaccgcaaggct
gtcatcagtcaaggcctcccacatcccttcgccatcacggtgtttgaagacagcctgtac
tggacagactggcacaccaagagcatcaatagtgctaacaaatttactgggaagaatcag
gaaatcattcgtaataaactccacttccccatggacattcacaccttgcacccccagcgc
cagcctgcaggcaaaaaccgctgtggggaaaacaacggaggctgcacccacctgtgtctg
cccagtggccagaactacacgtgtgcctgccccactggcttccgcaagatcagcagccac
gcctgtgcccagagtcttgacaagttcctgctttttgcccgaaggatggacatccgtcgg
atcagcttcgacacagaggacctgtccgatgatgtcatcccactggctgacgtgcgcagt
gctgtggcccttgactgggactcccgggatgaccacgtatactggacagacgtcagcact
gataccatcagcagggccaagtgggatggaacaggacaggaggtggtggtggataccagt
ctggagagccctgctggcctggccattgattgggtcaccaataagctgtactggacagat
gcaggtacagaccggattgaagtggccaacacagatggcagcatgaggacagtactcatc
tgggagaatcttgatcgtcctcgggacattgtggtggaacccacgggcgggtacatgtac
tggacagactggggtgcaagccctaagattgaacgagctggaatggatgcctcgggccgc
caagtcatcatctctacgaatctgacgtggcctaatggattggccattgactatgagtct
cagcgtctgtactgggctgatgctggcatgaagaccattgaatattctggactagatggc
agcaagaggaaggtgctgatcgggagccagctcccccacccatttgggctgaccctctac
ggagagcgcatctattggacagactgggagaccaagagcatacaaagtgctgaccgacgg
acagggctggacagggagactctgcaagagaacttagagaacctgatggacatccacgtc
ttccatcgccggcggcccccagtgtctacaccttgtgctgtggagaatggcggctgtagt
cacctgtgtcttcggtctccaaatccaagtggctttagctgcacctgtcctacaggcatc
aacctgcttcctgatggcaagacctgctcaccaggcatgaacagtttcctcatcttcgcc
aggaggatagacatacgcatggtctccctggacatcccttattttgcggatgtggtcgtc
cccatcaatgttaccatgaagaacaccattgccattggagtggacccccaagaaggaaaa
gtgtactggtctgacagcacgctgcaccggatcagccgtgccagtctagatggctcacag
cacgaggacatcatcaccacagggctccagaccacagatgggctcgccgtggatgccatt
ggccagaaggtgtattggacagacacaggaacaaaccgcattgaagtgggcaacctggac
gggtccatgcggaaagtgttggtgtggcagaacctcgacagtcccagggccattgtatta
tatcatgagatggggttcatgtactggactgactggggggagaatgccaagttggaacgg
tctgggatggatggctcagaccgcaccgtgctcatcaacaacaacctagggtggcccaat
ggactgacggtggacaaggccagttcccaactgctatgggctgatgctcacaccgagcga
atcgaggctgctgacctgaatggtgccaatcggcacacattggtatcaccagtgcagcac
ccatatggcctgaccctgcttgactcctacatctactggacggactggcagacccgcagc
atccatcgtgctgacaagggcaccggcagcaatgccatcctggtgaggtccaacctgcca
ggcctcatggacatccaagctgtggatcgggcccaggcactgggttttaacaagtgcggc
tcgagaaacggcggctgctcccacctctgcttgcctcggcctgctggcttctcctgtgcc
tgccccacgggcatcctgctgaagggagacgggaagtcctgcgacccctcccccgagacg
tacctgctcttctccagccgtggctccatccgccgcatctccctggacacgagcgaccac
accgacgtgcacgtccctgtgcctgagcttaacaatgtcatctccctggactacgacagc
gtggatggaaaggtctattacacagatgtgttcctggatgtcatcaggcgagccgacctg
aatggcagcaacatggagactgtgatcgggcatgggctgaagaccacggatggattggca
gtggactgggtggccaggaacctgtattggacagacaccggtcgaaataccattgaggcc
tcaaggctagatgggtcctgccgcaaagtgctgatcaacaacagcctggatgagccccgg
gccattgccgtcttccccaggaaggggttcctcttctggacagactggggacacatcgcc
aagattgaacgggcacacttggatggctctgagcgcaaggtcctcatcaacacagacctg
gggtggcccaacggcctgaccctggactatgacacccgcaggatctactgggtagatgca
catctggaccggattgagagcgctgaccttaatgggaagctgcggcaggtcttggtcagc
catgtgtcccacccctttgccctcacacagcaggacaggtggatctactggacagactgg
cagaccaagtccatccagcgcgttgacaagtactccggccgcaacaaggagacagtgctg
gccaatgtggaaggactcatggacatcattgtagtttctcctcagcgccagacgggaacc
aatgcctgtggggtgaacaatggtggctgcacccacctttgctttgccagagcctcagac
tttgtgtgtgcctgtcccgatgagcctgacggccggccatgctcccttgttcccgacctg
gtgcctccagcccctcgagccagtgaaaagagcccggtgctacccaacacaatacctccc
accttgcgtgctgccacttcccggacccacacatctctggaggaggctgaaggaagatgc
tcagaacgggatgcccagcagggtctctgtgcacattccaatgaggccgtacctgctgtt
ccaggggaagggcttcatgtcagctatgccatcgggggactgctcagtgttctgctgatt
ttggtggtgattgcagcattgatgctatacagacacaaaaaatccaagttcactgatcct
gcgatggggaacctgacctacagcaacccctcctaccgaacttctactcaggaagtgaaa
attgaagcaatcccaaagccggccatgtacaatcaactgtgctataagaaagagggaggg
cccgaccatagctacaccaaggagaagatcaagatcgtagaaggcatctgtctcctggct
ggggacgatgctgagtgggatgacctcaagcagctgcgcagctcccgggggggcctgctc
cgggaccatgtgtgcatgaagacagacacggtgtccatccaggccagctctggctctctg
gatgacacagagacggagcagctgttgcagggagagcagtcggagtgcagcagtgtccac
actgcagccactccggaaagacggggctctctgccggacacgggctggaaacatgaacgc
aagctctcctcagagagccaggtctaa
DBGET
integrated database retrieval system
