Ochotona princeps (American pika): 101528229
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Entry
101528229 CDS
T07609
Symbol
CNOT8
Name
(RefSeq) CCR4-NOT transcription complex subunit 8 isoform X1
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101528229 (CNOT8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opi03019
]
101528229 (CNOT8)
Messenger RNA biogenesis [BR:
opi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101528229 (CNOT8)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101528229 (CNOT8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
101528229
NCBI-ProteinID:
XP_004587556
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All DBs
Position
3A:complement(20089170..20107852)
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AA seq
292 aa
AA seq
DB search
MPAALVENSQVICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFRSSIDY
QYQLLRCNVDLLKIIQLGLTFTNEKGEYPSGINTWQFNFKFNLTEDMYSQDSIDLLANSG
LQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHE
FFHILNLFFPSIYDVKYLMKSCKNLKGGLQEVADQLDLQRIGRQHQAGSDSLLTGMAFFR
MKELFFEDSIDDAKYCGRLYGLGTGVAQKQNEDVDPAQEKMSILAIISNMQQ
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagcacttgtggagaacagccaggttatctgtgaagtctgggccagcaatcta
gaagaagagatgaggaagatccgagaaatcgtgctcagttacagttacattgctatggac
acagagtttccaggtgttgtcgttcgaccaattggagaatttcgtagttccatagattac
cagtatcagcttctgcggtgcaatgttgaccttttaaaaattatccagctgggccttaca
ttcacaaacgagaagggagaatatccttctggaatcaacacttggcagtttaacttcaaa
ttcaaccttacagaggacatgtactcccaggattccatagacctcctcgctaattcagga
ctgcagttccagaagcacgaagaggaggggattgacacactgcactttgcagagctgctc
atgacctccggagtcgttctatgtgacaacgtcaagtggctttcatttcacagtggctat
gactttggctacatggtcaagttgctgacagattcccgtttaccagaagaagaacatgaa
ttctttcatattctgaaccttttcttcccatccatttatgatgtgaaatacctgatgaag
agttgtaaaaacctcaagggaggtcttcaggaagttgcagatcagttggatttgcagaga
attggaaggcagcaccaggctggatcagactcgctgctgacaggaatggcgttcttcagg
atgaaagagttgttctttgaggacagcattgatgatgccaagtactgtggacggctctat
ggcctaggcaccggtgtggcccagaagcagaacgaggatgtggaccctgcccaggagaag
atgagcatcctggcaattatcagcaacatgcaacagtga
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