Ochotona princeps (American pika): 101528258
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Entry
101528258 CDS
T07609
Symbol
NEIL1
Name
(RefSeq) endonuclease 8-like 1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101528258 (NEIL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opi03400
]
101528258 (NEIL1)
Enzymes [BR:
opi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
101528258 (NEIL1)
DNA repair and recombination proteins [BR:
opi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
101528258 (NEIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
101528258
NCBI-ProteinID:
XP_004594750
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All DBs
Position
17:complement(90176348..90179049)
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AA seq
379 aa
AA seq
DB search
MPEGPELQLASHFVNQACEGLVFGGRVEKSAVSRNPEVPFESSAYRISALARGKELRLWL
RPLPGAGPCQEPLALVFRFGMTGSFQLVPGDELPRHAHLRFYTAPPSPRLALCFVDVRRF
GHWELGGEWQPGRGPCVLLEYEQFRENVLRNLADKAFDRPICEALLDQRFFNGIGNYLRA
EILFRLRIPPFEQARTVLEALRQRRPSPELTLSQKVKAKLQNPDLLELCHLVPKEVVQLG
GKGYGPANGEEDFAAFRAWLRCYGVPGMSSLQDRHGRTMWFQGDPGPLAPKGRKSRKKKL
QEPQPDPVYRTEDPPSPCKAPARKPRAKKHLSKMPAQQPPQAAEEGSRRGQPAVSGRRKA
RKKAEPEPPPLEPEVVSAS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagggccccgagctgcaactggccagccatttcgtgaaccaggcgtgcgagggg
ctggtgttcggcgggcgcgtggagaagtctgccgtcagtcgcaaccccgaagtgcccttc
gagagcagcgcctaccgcatctctgccttggcacgcggcaaggagctgcgcctgtggctc
cgaccgctgcccggggccgggccatgccaggagccgctggccctggtcttccgcttcggc
atgactggctccttccagctggtgccgggagatgagctgccgcgccatgcccacctgcgc
ttctacacagccccgccgagtccccggctcgcattgtgcttcgtggacgtccgccgcttc
ggccactgggagttggggggcgagtggcagccgggccgcgggccctgcgtcttgttggag
tacgagcagttcagggagaatgtactgcggaacctggcggacaaggccttcgaccggccc
atctgtgaagccctcctggaccagcgattcttcaatggcatcggcaactacctgcgggca
gagattctcttccggctgaggatcccgcccttcgagcaggcccgcacggtcctggaggcc
ctgcggcagcggcggccgagcccagagctgaccctgagccagaaggtcaaggccaagctg
cagaacccagacctgctggagctgtgccacctggtgcccaaggaggtggtgcagcttggg
ggtaagggctacgggccagcgaacggggaagaggacttcgctgccttcagggcctggctg
cggtgctatggtgtgccaggcatgagcagcttgcaggaccggcatggccgcaccatgtgg
ttccagggggacccagggcctctggcgcccaaaggacgcaagtcgcgcaagaagaaactc
caggaaccacagccggatcctgtgtacaggacagaggatcccccatctccatgcaaggcc
cctgccaggaaaccaagggccaagaagcatctgtcgaagatgccagcccagcagccccca
caagcagctgaggagggcagcaggagggggcagccggcggtctcaggccgccgcaaagcc
cggaagaaggctgagcctgagcccccgcccctggagccggaggtggtctctgcctcctag
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