Ochotona princeps (American pika): 101528310
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Entry
101528310 CDS
T07609
Symbol
RIN3
Name
(RefSeq) ras and Rab interactor 3
KO
K23687
Ras and Rab interactor 2/3
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101528310 (RIN3)
Membrane trafficking [BR:
opi04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
101528310 (RIN3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
SH2
T6SS_VipA
Motif
Other DBs
NCBI-GeneID:
101528310
NCBI-ProteinID:
XP_012782162
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All DBs
Position
20:complement(6857408..6946027)
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AA seq
1085 aa
AA seq
DB search
MASDRKPLTTKASPFLKAPLAAIQEVAGSERPARGGGFPTRRGAGGGARPGPCPVPVPGP
GERPVSEHSGAAARGRRRHDPTCGSGRARGLRRPQRTPTGFGARQGAAWNILSSLNFRLP
LSNRPIPDVSQGEEEEEEDGVGLCLPATLKNCLPHRGISVLEKLIKTCPVWLQLGLGREE
AARILHQEVAGMFLVRRDSGLKSLMLCVRFPPLNEGASEVLEYTIKEEKSVLYLEGSVLV
FEDIFRLISFYCVSRDLLPFTLRLPQAILEANSYPDLETISNLGLGFWDSSLNTRLRGRD
SPAQPPRDPAQPPRDPAPGAPPAASSRFPVLSGNCSCEIELSVGSDRLWFVNPLFIEDYG
GALPSDQPPPGSCPACPASPTSDAISPATPWAPRRPPPPPPPPAPALQPVPPAAAPVGPP
PAPHHPEADPHPAPHAPGPPDHPSQPPMTACERLPRPATSLGALREEEVPPGGAPSPSPL
AAAPPLPAKKGLPAVPPRRRLSERASLEDQSGGMAATPLRSPSQGTLGSPGDRPQRTAEQ
GQEAETKVNNPGVVPELPGKTRQPPVPPPRKKRVSRQLASALPSPSESARLPTPPEEKPT
PGVPKEGQSPAPQRHHAQACARPHSSPEFKGSLASLRDSSGASALATDQDSYSTSSTEEE
LEQLSLPSVKKKPTMILGKARHRLSFASFTSVFQALLSNDRKLYKRVVELAQDKTSYFGS
LVQDYKVYSLEMMARQDSSTEMLQEIRTMMTQLKSYLLQSTELRALVDPALHSEEELEAI
VESALYKCVLKPLKEAIDSSLYEIHSKDGSLQQLKDNQLVVLATTTTDLGITTSVPEMPT
MEKILQKFTSMHKAYSPEKKISILLKTCKLIYDSMALSNPGKPYGADDFLPVLMYVLVRS
SLTELLLDVEYMMELMDPALQLGEGSYYLTTTYGALEHIKNYDKITVTRQLSVEVQDSIH
RWERRRTLNKARASRSSVQDFICVSYLEPEHQARTLASRADTQAQALCEQCAEKFEVAQP
QEYRLFVLVDGRCFQLADEALPHRIKGYLLRSEPKRDFHFVYRPLDSGGSGGSPPCLVVR
DPNFL
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgacagaaaacccttgaccaccaaggccagccccttcctgaaagccccgctc
gctgcaatacaggaagtcgccgggagcgagcgcccagcgcgcggcggcggcttccccact
cgtcgtggggctggcggtggcgcccgcccgggcccttgcccagttcctgtgccagggcca
ggggagcgcccggtgtccgagcactccggagcagcggcccgcggccgccggcgacatgat
ccgacgtgcgggagcggccgggcgcggggactccgccggccccagcgcacccccacgggt
tttggagcccggcagggtgcggcgtggaacatcctcagctccctcaacttcaggctcccg
ctgtccaacagacctattccagatgtgagccaaggagaggaagaggaggaggaggacggc
gtggggctctgcctgccagctaccctgaagaactgcctgcctcaccggggcatcagcgtc
ctggagaagctcattaaaacgtgccccgtgtggctgcagctggggctgggccgggaagag
gcagccaggatcctgcaccaggaagtggctgggatgttcctagtgcgccgggacagtggc
ctgaagtccttgatgctgtgtgtccgcttccctcccctgaacgagggtgcgtccgaggtg
ctggaatacaccattaaggaggaaaagtccgtgctgtacctggaaggctcggtcctcgtg
tttgaggacatcttcagactgatctcattttactgcgtcagcagagatctcctgcccttc
acgctgcgcctgccccaggccatccttgaagccaacagctacccagacctcgagaccatc
tccaacctgggcctgggcttctgggactcctcactgaacacccggctgcgaggtcgtgac
agcccggcacagccgccccgagacccggcccagccgccccgagacccggcccccggtgcc
cctccagctgcgagctccaggtttccggtgctgtctgggaactgctcctgcgaaatagag
ctgtcggtaggaagtgaccgcctgtggtttgtgaacccccttttcatcgaggactacggg
ggcgccctaccctcggaccagccgccccctgggagctgccctgcatgccccgcgtccccc
acctctgatgctatctcacccgccaccccgtgggctccacgccgcccaccaccaccgccg
ccacctccagcacctgccttgcagcccgtgccccctgctgctgctcctgtgggtcctccg
ccggctccccaccacccagaagcagacccccatcctgccccccatgctccaggaccccca
gaccacccaagccagccacccatgacagcctgtgagcggctcccacgtcctgccacaagc
ctgggggctctcagggaggaggaggtgccgccagggggagcccccagcccctcgcccctg
gcagctgctcctcctctgccagccaagaagggccttcccgccgtgccgcccagacgccgc
ctctcggagagggcgtccctggaggaccagagtggggggatggcggcgacgcccctcagg
tcgccttcccaagggactttaggcagccctggggaccggcctcagaggacagcagagcag
ggccaggaagcagaaaccaaagtcaacaatccgggcgtggtgccagagctgccgggaaag
accaggcaacccccggtcccgcccccaaggaagaagcgggtctcccgacagctggcctct
gccctacccagcccttctgagagcgccaggctccccacgccaccggaggagaagcccacc
cccggagtccccaaagaaggccagagccctgccccgcagcggcaccatgcccaggcatgt
gcccgtccccacagttccccagagttcaagggctccctggcctctctgcgggacagctcg
ggggcgtcagccttggccacggaccaggattcctactccaccagcagcacggaggaggag
ctggagcagctcagcctccccagcgtgaagaagaagccaacgatgattctgggcaaggcg
cgccaccgcctcagtttcgccagcttcaccagcgtcttccaggccctgctctccaacgac
cgcaagctctacaagcgggtggtggagctggcgcaggacaagacctcgtacttcggcagc
ctggtgcaggactacaaggtgtacagcctggagatgatggcgcgccaggactcgagcacc
gagatgctacaggagatccgaaccatgatgacccagctcaagagctacctgctgcagagc
acggagctcagggccctggtggaccccgccctgcactcagaggaggagctcgaggcgatc
gtggagtcggccctgtataagtgcgtcctgaagcccttgaaggaggccatcgactccagc
ctgtacgagatccacagcaaggatggctccctgcagcagctcaaggacaaccagctggtg
gtcctggccaccaccaccaccgacctgggcatcaccaccagtgtgcccgagatgcccacc
atggagaagatcctgcagaaattcaccagcatgcacaaggcctactcgcctgagaagaag
atctccatcctgctcaagacttgcaagctcatctacgactccatggccctcagcaaccca
gggaagccgtacggggcggacgactttctcccggtgctcatgtacgtgctggtgcggagc
agcctcaccgagctactcctggatgtggagtacatgatggagctgatggaccctgccctg
cagctgggggagggctcttactatctgaccaccacctacggggccctggagcacatcaag
aactacgacaagatcacggtaacgcggcagctgagcgtggaggtgcaggactccatccac
cgctgggagcgccggcgcacgctcaacaaggcccgggcctcgcgctcctccgtgcaggac
ttcatctgtgtgtcgtacttggagcccgagcaccaggcacggacgctggcttcgcgggcg
gacacgcaggcgcaggcgctgtgtgaacagtgcgctgaaaagttcgaggtggcgcagccg
caggagtaccggctcttcgtgctggtggacgggcgctgcttccagctggccgacgaggcg
ctgccccaccgcatcaagggctacctgctgcggagcgagcccaagcgcgactttcacttc
gtataccggcccctggacagtggcggcagcggtgggagcccgccttgcctcgtggtgcga
gatcccaacttcctgtga
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