Ochotona princeps (American pika): 101528620
Help
Entry
101528620 CDS
T07609
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04110
Cell cycle
opi04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101528620 (SMC3)
04114 Oocyte meiosis
101528620 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opi03036
]
101528620 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
opi00535
]
101528620 (SMC3)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
101528620 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
101528620 (SMC3)
Proteoglycans [BR:
opi00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
101528620 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
101528620
NCBI-ProteinID:
XP_004579911
LinkDB
All DBs
Position
18:complement(16542381..16575317)
Genome browser
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFHRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNDIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaagcaggtgattatccagggttttcgaagttacagagatcaaacaattgta
gatcccttcagctcaaaacataatgttattgtgggcagaaatggatctggaaaaagtaac
tttttttatgctattcagtttgttctcagtgatgaatttagtcatcttcgtccagaacag
cgattggctttgttgcatgagggtactggtcctcgtgttatttctgcttttgtggaaatt
atttttgacaattcggacaaccggttaccaatcgacaaagaagaagtgtcacttcgaaga
gttattggtgccaaaaaggatcaatatttcttagataagaagatggtcacgaaaaatgat
gtcatgaatcttcttgaaagtgctggtttttcccgaagcaatccttactatattgttaag
caaggaaagatcaaccagatggcaacagccccagattcccagagactgaagctactgaga
gaagttgctggtactagagtatatgatgaacggaaagaagaaagtatctccctaatgaaa
gaaacagagggcaaacgggaaaagatcaatgagttgttaaaatacattgaagagagatta
catactttagaggaagaaaaggaagaactagctcagtatcagaagtgggataaaatgaga
cgagccctggaatataccatttacaatcaggagcttaacgagactcgtgctaaacttgat
gagctttctgccaaacgagagactagtggtgaaaaatccaggcaattaagagatgctcag
caggatgccagagataaaatggaggatattgagcgccaagttagagaattgaaaacaaaa
atttcagccatgaaagaagaaaaagaacagctcagtgcagaaagacaagaacaaattaag
cagagaaccaagttggagcttaaagccaaggatttacaagatgaattggcaggcaatagt
gagcagaggaaacggttattaaaagagaggcaaaagctgcttgaaaaaatagaagaaaaa
cagaaggaattggcagaaacagaaccaaaattcaacagtgtaaaagaaaaagaagagaga
ggaattgcaagattggctcaagctacccaggagaggacagatctctatgcaaagcagggt
cgaggaagccagtttacatcgaaagaagaaagggataagtggattaaaaaggaactcaag
tctttagaccaggctattaatgacaagaaaagacagattgctgctatacataaagatttg
gaagacactgaggcaaataaagagaaaaatctggaacagtataacaaactggatcaagat
ctcaatgaggtcaaggctcgagtggaggaattggacaggaagtactacgaagtgaaaaac
aagaaggatgagctgcagagtgaaagaaactacctgtggagagaggagaatgccgaacaa
caagcgcttgctgctaaaagagaagatcttgaaaagaagcaacaacttcttagagcagca
acaggaaaggctattttaaatggaatcgacagcataaacaaagtactggaccactttcac
agaaaaggaataaatcagcatgttcagaatggctatcatggcattgtaatgaacaacttt
gaatgtgagccagctttttacacatgtgtggaggtcactgctgggaacaggttgttttat
cacattgttgattcagatgaagtcagcacaaagattttgatggagtttaataagatgaat
ctacctggagaggttacttttctgcctcttaacaagttagatgtcagggatactgcctat
cctgagaccaatgatgctattcctatgatcagtaagctgagatacaaccctaggtttgat
aaagctttcaaacatgtgtttggaaaaacactaatctgtcgtagcatggaagtttcaact
cagctggcccgtgctttcactatggactgcataaccttggaaggtgaccaggtcagtcat
cggggtgctctaactggaggttattatgacacaaggaaatctcgacttgaattacagaaa
gatgttagaaaggcagaggaggagttgggtgagcttgaagcaaagctcaatgaaaatcta
cgcagaaatattgaaagaattaataatgacattgatcagttgatgaaccaaatgcagcag
atagaaacccagcaaaggaaatttaaagcatccagagacagcatattatcagaaatgaag
atgctgaaagagaagaggcagcagtcagagaaaacctttatgcctaagcaacgcagctta
caaagtttggaggcaagtctgcacgcgatggagtccaccagggagtcactgaaagcagag
ctgggaacagatttgctctctcagcttagtctggaagatcagaaaagagtagatgcactc
aatgatgaaattcgtcaacttcagcaggaaaataggcagttgctgaatgaaagaattaaa
ttagaaggtattattactcgagtagagacttacctcaatgagaatctgaggaaacgcctg
gaccaagtggaacaggaacttaatgaactgagagagacagaagggggcactgtcctcaca
gccaccacatcagagctggaagccatcaataaacgagtgaaagataccatggcacgctca
gaagatttggacaattccattgacaaaacagaagctggaattaaagaacttcagaagagt
atggaacgctggaaaaatatggaaaaggaacacatggacgctataaatcatgatactaaa
gaactggaaaagatgaccaatcgacaaggcatgttgttgaagaagaaagaagagtgtatg
aagaaaatccgtgagcttgggtcattgccccaagaagcatttgagaagtaccagacactg
agtctcaagcagttgtttcgaaaacttgagcagtgcaacacagaattaaagaagtacagc
catgttaacaaaaaagcattagatcagtttgtaaacttttctgagcagaaagagaagtta
ataaagcgacaagaagagttggatagggggtataaatcaatcatggaattgatgaatgta
cttgaacttcgaaaatatgaagccattcagttaactttcaaacaggtgtccaagaacttc
agtgaagtgttccagaagttagtgcctggtggcaaagcaactttggtgatgaagaagggc
gatgtggagggcagtcagtctcaggatgaaggagaagggagtggtgagagcgagagaggt
tctgggtcacaaagcagtgtcccgtcagttgaccagttcactggagttggaatcagggtg
tcattcacaggaaagcaaggtgaaatgagagaaatgcagcagctgtcaggtggacagaag
tccctggttgccctggctctgatctttgccattcagaaatgcgacccagctccgttctac
ttgtttgatgagattgaccaggctctggatgctcagcacagaaaggcagtgtcagatatg
attatggaacttgctgtacatgctcagtttattacaactacttttaggcctgaactgctt
gagtcagctgacaaattctatggtgtaaagttcagaaataaggtcagtcatattgatgta
atcacagcagagatggccaaagattttgtagaagatgataccacacatggttaa
DBGET
integrated database retrieval system
