Ochotona princeps (American pika): 101528651
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Entry
101528651 CDS
T07609
Symbol
TSKU
Name
(RefSeq) tsukushin
KO
K08130
tsukushi
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
opi00535
]
101528651 (TSKU)
Proteoglycans [BR:
opi00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
101528651 (TSKU)
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Motif
Pfam:
LRR_8
LRR_1
LRR_4
LRR_6
LRR_5
LRR_LRWD1
LRR_NXF1-5
LRRNT
Motif
Other DBs
NCBI-GeneID:
101528651
NCBI-ProteinID:
XP_004589923
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All DBs
Position
1:complement(55503186..55504244)
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AA seq
352 aa
AA seq
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MLLPVLLLALATSGTQATRPCFPGCQCDVETFGLFDSFSLTRVDCSSLGPHIMPVPIPLD
TAHLDLSSNRLETVNESVLAGPGYTTLAGLDLSHNLLTSLPPTAFSRLRYLESLDLSHNG
LAALPAGIFTSSPLSDVNLSYNQLREVSLRAFTTPSQGHTQHIDLTHNLLPHPVRATLPT
PTIQSLNLAWNRLRAVPDLHQLPLRYLNLDGNPLATIGSGAFTGLAGLTHLSLASLQGVP
QLEPYGFQELAGLQILDLSGNPRLQWTGAEVFSGLGSLQELDLSGTGLVPLPELLLHHLP
ALQSVNVGKDVHCRRLVRKGAYPRQPGSSPEVALHCGDMQEAAAAARGPDIL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgctactgcccgtgttgctgctggctctggccacgagtggaacccaggcgacccggccg
tgcttccccgggtgccagtgtgacgtggagacctttgggctctttgacagcttcagcctg
acacgagtagactgcagcagcctgggcccccacatcatgcctgtgcccatccccctggac
acggcccacctggacctgtcctccaaccgactagagacagtgaacgagtcagtgctggca
ggccctggctacaccacgctggctggcctggacctcagccacaacctactcaccagcctc
ccacccaccgccttctcccgtctgcgctacctggagtcactggacctcagtcacaacggc
ctggctgccctgccggccggcatcttcactagctcccctctgagcgacgtgaacctcagc
tacaaccagctgcgggaggtctcccttcgggccttcaccacgcccagccagggccacaca
caacacatcgacctcacccacaatctactgccccacccagtccgggccaccctgcccacg
cccaccatccagagcctcaacctggcctggaaccgactccgcgctgtgcccgacctccac
cagctacccttgcgttacctgaacctggacgggaaccctctggccaccattggctcgggg
gccttcacggggctggcaggcctgacccacctgtcgctagccagcctgcaaggtgtcccc
cagctggagccctatggtttccaggaactggcgggtctgcagatcctggatctgtcaggc
aaccccaggctccagtggacaggcgctgaggtcttctcaggcctgggctcgctgcaggag
ctggacctgtcggggacgggcctggtgcccctgcctgagctgctgttgcatcacctgccc
gccctgcagagtgtcaacgtgggcaaggatgtgcactgccggcgcctggtgcggaagggg
gcctacccacggcagcctggctccagccccgaggtggccctgcactgtggggacatgcag
gaggctgctgctgctgccagaggccctgacatcttgtga
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