Ochotona princeps (American pika): 101528710
Help
Entry
101528710 CDS
T07609
Symbol
SLIT3
Name
(RefSeq) slit homolog 3 protein
KO
K06850
slit 3
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101528710 (SLIT3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
opi00536
]
101528710 (SLIT3)
Glycosaminoglycan binding proteins [BR:
opi00536
]
Heparan sulfate / Heparin
Axon guidance molecules
101528710 (SLIT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_5
LRR_4
hEGF
Laminin_G_2
Laminin_G_1
LRR_9
LRRCT
LRRNT
EGF_TEN
LRR_14
JAG1-like_EGF2
LRR_NXF1-5
EGF_Teneurin
EGF_DL_JAG
LRR_EndoS
EGF_3
EGF_CA
Laminin_G_3
LRR_6
YwqH-like
Motif
Other DBs
NCBI-GeneID:
101528710
NCBI-ProteinID:
XP_004587643
LinkDB
All DBs
Position
3A:8051304..8723884
Genome browser
AA seq
1429 aa
AA seq
DB search
MSDVLACDSKLERAYTEKRHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQS
NPKLTRLDLSENQIQGIPRKAFRGIADVKNLQLDNNHISCIEDGAFRALRDLEILTLNNN
NISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTIGQFTLCMAPVHLRGF
NVADVQKKEYVCPAPHSEPPSCNANLLSCPSACTCSNNIVDCRAKGLTEIPANLPEGIVE
IRLEQNSIKSIPAGAFSPYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIA
KGLFDGLVSLQLLLLNANKINCLRVSTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQT
LHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRISQIKSKKFRCSGSEDY
RSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLTRIPSHLPEYVTDLRLNDNEISVLEATG
IFKKLPNLRKINLSNNKIKEMREGTFDGAAGVQELLLTANQLENVHGRMFRGLTGLKTLM
LRSNLISCVSNDTFAGLSSVRLLSLYDNRITTIMPGAFTTLVSLSTINLLSNPFNCNCHL
AWLGKWLRKRRIVSGNPRCQKPFFLKEIPIQDVAIQDFTCEGNDESSCQLSPRCPEQCTC
METVVRCSNRGLHTLPKGMPKDVTELDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCI
PIHAFNGLRSLRVLTLHGNDISSVPEGSFNDLTSLSHLALGTNPLHCDCSLRWLSEWVKA
GYKEPGIARCSSPEAMADRLLLTTPTHRFQCKGPVDINILAKCNACLSSPCKNNGTCSPD
SVELYHCTCPYSYKGKDCTVPINTCIQSPCLHGGTCHLSESHKDGFSCSCPVGFEGQRCE
INPDDCEDNDCENNATCVDGINNYVCVCPPNYTGELCDEVIDHCAPGINLCQHEAKCISL
DKGFRCDCLPGYSGKLCETDDDDCVAHKCRHGAQCVDAVNGYTCICPQGFSGLFCEHPPP
MVLLQTSPCDQYECQNGAQCVVVQQEPTCRCPPGFAGPRCEKLITVNFVGKDSYVELASA
KVRSQANISLQVATDKDNGILLYKGDNDPLALELYQGHVRLVYDTLSSPPTTVYSVETVN
DGQFHSVELVMLNQTLNLVVDKGAPKSLGKLQKQPAVGTNSPLYLGGIPTSTGLSALRQG
ADRPLGGFHGCIHEVRINNELQDFKALPPQSLGVSPGCKSCTVCKHGLCRSVEKDSVVCE
CHPGWTGPLCDQEAQDPCLSHSCSHGKCVATGTSYVCRCAEGYGGTLCDLKNDSANACSA
FKCHHGQCHISDRGEPHCSCQPGFSGEHCEQENPCLGEVVREVIRRQKGYASCATASKVP
RMECRGGCGSQCCQATRSKRRKYVFQCTDGSSFVEEVERHLECGCHACS
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgttttggcgtgtgacagcaaactggaaagagcttatactgaaaagaggcat
ctggaagacaaccaagtcagcgtcattgagagaggcgccttccaggatctgaagcagctg
gagcgactgcgtctgaacaagaataagctccaagtcctcccagaattgcttttccaaagc
aatccgaagctcaccagactagatctgagcgagaaccagatccaggggatcccaaggaag
gcgttccgaggcattgctgacgtgaagaacctgcaactggacaacaatcacatcagctgc
attgaagatggagccttccgggcgctgcgcgatttggagatcctcaccctcaacaacaac
aacattagccgcatcctggtcaccagttttaaccacatgccgaagattcgaactctgcgc
ctccactccaaccacctgtactgtgactgccacctggcctggctctcagattggctgcga
cagcggcggacgattggccagtttacactctgcatggctcccgtgcacctgaggggcttc
aatgtggcagatgttcagaagaaggagtatgtgtgcccagccccccactcagagcctcca
tcctgcaatgccaacttgctctcctgtccatcagcctgcacctgcagtaataacatcgtg
gactgtcgagcaaagggcctcacggagatccctgccaacttgccagagggtatcgtcgaa
atacgccttgaacagaactccatcaaatccatccctgcgggagccttcagcccatacaag
aagctgaagagaatagacatcagcaagaatcagatatcggacattgctccagatgctttc
cagggcctgaagtcactgacgtcgctggtgctctatgggaacaagatcactgagattgcc
aagggcctgttcgatgggctggtgtccctgcaactgctcctcctcaatgccaacaagatc
aactgcctgcgagtgagcacatttcaggacctgcagaacctcaacctgctctcactgtac
gacaacaagctgcagaccatcagcaagggactgttcgctcctctgcagtcgatccagaca
ctccacttagcccagaacccatttgtgtgtgactgtcacttgaagtggctggctgactac
ctccaggacaaccccatcgagacaagcggggcccgctgcagcagcccgcgccggctcgcc
aacaagcgcatcagccagatcaagagcaagaagttccgctgctcaggctctgaagattac
cgcagcaggttcagcagtgagtgcttcatggacctggtgtgccccgagaagtgccgctgc
gagggcaccattgtggactgctccaaccagaagctgacccgcatcccgagccatctgcct
gaatacgtcactgatctgcggttgaatgacaacgagatctctgtcctggaagccactggg
atcttcaaaaagttgcccaacctgcggaaaataaacctgagcaacaataagatcaaggag
atgcgggagggcacctttgacggagcagccggcgtgcaggagctgctgctgacagccaac
cagctggagaacgtgcatgggcgcatgttccgaggcctcactggcctcaaaaccttgatg
ctgcgcagtaacttgatcagctgtgtgagcaacgacacctttgctggcctgagctccgtg
aggctgctgtccctctacgacaaccgtatcaccaccatcatgcccggggccttcaccacg
ctggtctctctgtccaccataaacctcctgtccaaccccttcaactgcaactgccacctg
gcctggctcggcaagtggttgaggaagaggcggatcgtcagtgggaacccccggtgccag
aaacccttcttcctaaaggagattcccatccaggacgtggccatccaggacttcacatgt
gaaggcaacgacgagagcagctgccagctgagcccacgctgcccggagcagtgcacctgc
atggagacagtggtacgatgcagcaacagggggctccataccctccccaaaggcatgccc
aaggatgtcaccgagcttgacctcagcaacaacagcatcagtatgctgaccaactacacc
ttcagtaacatgtctcacctctccactctgatcctgagctacaaccggctgcgctgcatc
cccatccatgccttcaatgggctgcggtctctccgagtgctaaccctccatggcaacgac
atttccagcgttcccgaaggttccttcaacgacctcacatctctttctcatctggcgctg
ggcaccaaccccctgcactgtgactgcagtctgcggtggctgtccgagtgggtgaaggcg
gggtacaaggagcctggcatcgcccgctgcagtagccccgaggccatggcagaccgactc
ctactcaccacccccacccaccgattccagtgcaaagggccagtagacatcaacattttg
gccaagtgcaatgcctgcctctccagtccatgcaagaacaatgggacatgcagcccggat
tccgtggagctgtaccactgcacctgcccctacagctacaagggcaaagactgcaccgtg
cccatcaacacctgcatccagagcccctgtctgcacggaggcacctgccacctgagtgaa
agccacaaggatggattcagctgttcctgtcccgtgggctttgaggggcaacggtgtgag
atcaacccagatgactgcgaggacaacgactgtgaaaacaacgccacctgtgtggatggc
atcaacaactacgtgtgtgtctgcccccctaactacacaggtgaactgtgtgacgaggtg
attgaccactgtgcaccggggataaacctctgtcagcatgaggccaagtgcatctccctg
gacaaaggattcaggtgtgactgtctccctggctacagcgggaagctctgtgagacagac
gacgatgactgtgtggcccacaagtgccgccatggggcccagtgcgtggatgcagtgaac
ggctacacctgtatctgcccccagggcttcagtgggctcttctgcgagcatcccccaccc
atggtcctgctgcagaccagcccctgtgaccagtacgagtgccagaacggagcccagtgc
gtcgtggttcagcaggagcccacgtgccgctgtccgcctggctttgccgggcccaggtgt
gagaagctcatcactgtcaacttcgtgggcaaggactcctatgtggaactggcctccgcc
aaggtccggtcccaagccaacatctctctacaggtggccactgacaaggacaatggcatc
ctgctctacaagggagataatgaccccctggcactggagctgtaccagggccacgtgagg
ctggtttacgacacgctgagctcacctccaaccacagtgtacagtgtggagacggtgaat
gacgggcagttccacagcgtggagctggtgatgctgaatcagaccctgaacctggtggtg
gacaaaggagcccccaagagcctgggcaagctccagaagcagccagcagtgggcaccaac
agtcccctctaccttggaggtatccccacctccactggcctctcggccttgcgccagggt
gctgaccggccactgggtggcttccacggctgcatccacgaggtgcgcatcaacaacgaa
ctgcaggacttcaaggccctcccgccgcagtcgctgggagtctcaccgggctgcaagtcc
tgcactgtgtgcaagcacggcctgtgtcgctccgtggagaaggacagtgtggtgtgtgag
tgccaccctggctggacaggccctctgtgcgaccaggaggcccaggacccctgcctcagc
cacagctgcagccacggaaagtgtgtggcaaccgggacctcatacgtgtgcaggtgtgcc
gagggctatggaggtactttgtgtgacctcaagaatgactctgccaacgcctgctcggcc
ttcaagtgtcaccatggccagtgccacatctctgaccgaggagagccccactgctcgtgc
cagcccggcttcagcggggagcactgtgaacaagagaacccgtgcctcggggaggtagtg
cgagaggtgatccggcgccagaaaggttacgcgtcatgtgccacagcctctaaggtgccc
agaatggaatgtcgcgggggctgcggctcccagtgctgccaggctacccgcagcaagcgg
cggaaatacgtcttccagtgcacggacggctcctcatttgtggaagaggtggagagacac
ttagagtgtggctgtcacgcgtgttcctaa
DBGET
integrated database retrieval system
