KEGG   Ochotona princeps (American pika): 101528754
Entry
101528754         CDS       T07609                                 
Symbol
PCDH17
Name
(RefSeq) protocadherin-17
  KO
K16499  protocadherin delta 2
Organism
opi  Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:opi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:opi04515]
    101528754 (PCDH17)
Cell adhesion molecules [BR:opi04515]
 Cadherins
  Protocadherins
   101528754 (PCDH17)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 NUC153 PepSY
Other DBs
NCBI-GeneID: 101528754
NCBI-ProteinID: XP_004577500
LinkDB
Position
8:33417425..33513281
AA seq 1161 aa
MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGKDARLQPGLPPAERGGGGRSK
SGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKCQLSLEVFANDKEICMIKV
EIQDINDNAPSFPSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDDHGLFA
LDVKSRGDGTKFPELVIQKALDREQQNHHTLVLTALDGGEPPRSATVQINVKVIDSNDNS
PVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSIDPKT
GLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQGA
LSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGGGLGGPGGSVPFKLEENY
DNFYTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSFSVKILDENDNPPRFTKGLYV
LQVHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALR
SFNYEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVP
RNAGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTPV
VELVVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPRVNGEQHHWDMSLPLIVTLSTISII
LLAAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEERN
AMNVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCHTSFTG
QGTNASETPATRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQA
DSDQDTNKGSCCDMSVREALKMKTSSTKSQPLEQEPEECVNCTDECRVLGHSDRCWMPQF
PAANQADNADYRTNLFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPY
LKAKRALSPLLQEVPSASSSPTKACIEPCSSTKGSLDGCEAKPGALAEASSQYLPTDSQY
LSPSKQPRDPSFLASEQMARVLAEVHSRASRDSSEMGAVLEQLDHPNRDLGRESVDAEEV
VREIDKLLQDCRGNDPVAVRK
NT seq 3486 nt   +upstreamnt  +downstreamnt
atgtacctatccatctgttgctgtttcctcctatgggcccccgccctgacgctcaaaaac
ctcaactactcggtgcccgaggagcaaggggccggcacggtcatcggtaacatcggcaag
gatgctcgcctgcagccggggcttcctccggctgagcgcggcggcggcgggcgcagcaag
tccggcagctaccgggtgttggagaactcggcgccgcacctgctggacgtggacgcggac
agcggactcctctacaccaaacagcggatcgaccgcgagtccctgtgccgccacaacgcc
aaatgccagctgtcgctggaggtgttcgccaacgacaaggagatctgcatgatcaaggtg
gagatccaggacatcaacgacaatgctccctccttcccgtctgaccagatcgaaatggac
atttccgagaacgcagcccctggcacccgcttcccgctcaccagcgcgcacgacccagat
gcgggcgaaaacggcctccgcacctacctgctcacccgcgacgaccacggcctcttcgcc
ctggacgtcaagtcccgcggcgacggcaccaagttcccggagctggtcattcagaaggcg
ctggaccgcgagcagcaaaaccatcacacgctggtgctgacggccctggacggcggcgag
ccgccgcgctcggccacggtgcagatcaacgtgaaggtgatagattccaacgacaacagc
ccggtcttcgaggctccctcctacctggtggagctgcccgagaacgccccgctgggcacg
gtggtcatcgacctgaacgccaccgacgcggacgaggggcccaacggcgaagtgctctac
tccttcagcagctacgtgcccgaccgagtccgggagctcttctccattgaccccaagacc
ggcctcatccgggtcaagggcaacctggactacgaggagaacggcatgttggagatcgac
gtgcaggcccgagacctggggccgaaccccatcccagcccactgcaaagtcacagtcaag
ctcatcgaccgcaacgacaacgcgccgtccatcggtttcgtctccgtacgccagggggcg
ctcagcgaggccgccccgcccggcacggtcatcgccctggtgcgggtcaccgaccgggac
tcgggcaagaacgggcagctgcaatgtcgggtcctggggggaggagggacgggcggcgga
ggcggcgggggcctgggcgggcccgggggctccgtccccttcaaactggaggagaactat
gacaacttctacacggtggtgacggaccgcccgctggaccgggagacccaggacgagtac
aacgtgacaatcgtggcgcgggacgggggctcgcctcccctcaactccacgaagtcgttc
tcggtcaagatcctagacgagaacgacaaccctccccgcttcaccaaggggctctacgtg
ctgcaggtgcacgagaacaacatcccaggagaatacctaggctccgtgctggcccaggat
cccgacctggggcagaacgggaccgtgtcctattccatcctgccctcccacatcggcgac
gtgtccatctacacctatgtctccgtgaaccccaccaacggggccatctatgccctgcgc
tcctttaactacgaacagaccaaggctttcgagttcaaggtgctggcgaaggactcgggg
gcacccgcgcacctggagagcaacgccacggtgagggtgaccgtgctggacgtgaatgac
aacgctccggtgatcgtactgcccacgctgcagaacgacaccgcggaactgcaggtgccg
cgcaacgccggcctcggctacctggtgagcaccgtgcgagccctggacagcgacttcggc
gagagcgggcgcctcacctacgagatcgtggacggtaacgacgaccacctgtttgagatc
gatccgtccagcggcgagatccgcacgctgcaccccttctgggaagacgtgacgcccgtg
gtggagctggtggtgaaggtgacggatcacggcaagcccaccctgtccgccgtggccaag
ctcatcatccgctcggtgagcggctccctgcccgagggggtgccccgggtgaacggcgag
cagcaccactgggacatgtcgctgccgctcatcgtgactctgagcaccatctccatcatc
ctcctagcggccatgatcaccatcgccgtcaagtgcaagcgggagaacaaggagatccgc
acttacaactgccgcatcgccgagtacagccacccgcagctgggcgggggcaagggcaag
aagaagaagattaacaaaaacgatatcatgctggtgcagagcgaagtggaggagaggaac
gccatgaacgtcatgaacgtggtgagcagcccctccctggccacctcccccatgtacttc
gactaccagacccgcctgcccctcagctcgccccggtcggaggtgatgtacctcaaaccg
gcctccaacaacctgactgtcccgcaggggcacgcaggctgccacaccagcttcaccgga
caagggactaatgcgagcgagacccctgccactcggatgtccataattcagacagacaat
tttcccgcagagcccaattacatgggcagcaggcagcagtttgttcaaagtagctccacg
tttaaggacccagaaagagccagcctgagagacagtgggcacggggacagtgatcaggct
gacagtgaccaagacactaacaaaggctcctgctgtgacatgtctgttagggaggcactc
aagatgaaaacttcttcaactaaaagccaaccacttgaacaagaaccagaagagtgtgtt
aattgcacagatgaatgccgagtgcttggtcattctgacaggtgttggatgccacagttc
cctgcagccaatcaggctgacaatgctgattaccgcacaaatctctttgtacccaccgtt
gaagctaatgttgagactgagacttacgaaactgtgaatcccactgggaaaaagactttt
tgtacatttggaaaagacaagcgagagcacactattctcattgccaatgttaaaccttat
ttaaaagccaaacgtgccctgagccctctcctccaagaggtcccttcagcatcaagcagc
ccaaccaaggcgtgtatcgagccttgctcctcgacaaaaggctccttggatggttgtgaa
gcgaaaccaggagccctcgccgaagcaagcagtcaatatttacccactgacagtcagtat
ctgtctcccagtaagcaaccgagagacccttccttcctggcttccgagcagatggcaagg
gtcttggcagaggtgcattcccgagcaagccgggattcctccgagatgggcgctgttctt
gagcagctggaccatcccaacagggatctgggcagagagtcagtggatgcagaagaagtt
gtgcgagagattgataagcttttgcaggactgccggggaaatgaccctgtggctgtgaga
aagtga

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