Ochotona princeps (American pika): 101528765
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Entry
101528765 CDS
T07609
Symbol
RAD54L
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101528765 (RAD54L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opi03400
]
101528765 (RAD54L)
DNA repair and recombination proteins [BR:
opi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
101528765 (RAD54L)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
101528765
NCBI-ProteinID:
XP_036350146
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Position
13:36960806..36993555
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AA seq
768 aa
AA seq
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MLYDIDVPKLNLPITSDGEKARRSLAPSQLAKRKSEGRSSEDEDWQPGASSTPKRQKSRS
ETQTQECFQSPFRKPLTQLINRPSCLDSSQHEAFIRSILSKPFKVPIPNYQGPLGSRALG
LKRAGIRRALHDPLEEGALVLYEPPMLSAHEQLKLDKEKLPVHVVVDPILSKVLRPHQRE
GVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSP
SSLVKNWYNEVGKWLGGRIQPLAIDGGSKEEIDKKLEGFMNQHGARVPSPILIISYETFR
LHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTRRRVLISGTPIQNDLLEYFSLV
HFVNSGILGTAQEFKKRFELPILKSRDAAASEADRQLGEERLKELTSVVNRCLIRRTSDI
LSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELCEGKMSVSSLSSITSLKKLCNH
PALIYDKCVEEEDGFEGALNIFPPGYSSKAVEPQLSGKMLVLDYILAVTRSRSSDKVVLV
SNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPTSPDFVFMLSSKAGGCG
LNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKK
ALSSCVVDEEQDVERHFSLGELKELFTLDETSLSDTHDRLHCRRCVNNRQVWPPPDGSDC
TSDLAQWNHSTDKRGLQDEVLQAAWDAASTAITFVFHQRSHEEQRGVH
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgctctacgacattgatgtgcccaagctcaatctccccatcacaagtgatggtgagaag
gcaaggaggagcttagctcccagccagctggccaagaggaaatccgagggcagatcctct
gaggatgaagactggcagcctggggcatcctcgactcctaagagacagaaatccagaagc
gagacacagacccaggaatgcttccagtctcccttccggaaacctttgactcagctgatt
aatcggccatcctgcctggatagcagtcaacatgaagcatttattcgaagcattttgtca
aaacctttcaaagtccccattccaaattatcaaggtcctctaggttctcgggctttgggc
ctgaaaagggccggaatccgccgggccctccacgacccactggaagaaggcgccttggtt
ctgtatgaaccacccatgctgagtgcccatgaacagctgaagctggacaaggaaaaactc
cctgtccatgtggttgttgaccctattctcagtaaggtcttgcggcctcatcagagagag
ggagtgaagttcctgtgggagtgtgtcaccagccggcgaatccctggcagccacggctgc
atcatggctgatgagatgggcctaggaaagacgctacagtgcatcacattgatgtggaca
cttctgcgccagagtccagagtgcaaaccagaaattgacaaagcagttgtagtgtcaccc
tctagcctggtgaagaattggtacaacgaggttgggaaatggcttggagggaggatccag
cctctggccatcgacggaggatctaaggaggagatagacaaaaagctggagggattcatg
aaccagcatggagccagagtgccttctcccattctcatcatttcctatgaaacattccgc
cttcatgttggagtcctccagaagggaagtgttggactagtcatctgtgacgagggacac
aggctcaagaattctgagaatcaaacctatcaggccttggacagcttgaataccaggagg
cgggtgctcatctctgggacccccatccagaatgatctactggagtacttcagcttggta
cattttgtgaattcgggcatcctagggactgcccaagaattcaagaagcgttttgaattg
ccaattttgaagagtcgagatgcagctgccagtgaagcagacaggcagctaggagaagag
cgactgaaggaactcaccagtgttgtgaataggtgtttgatacggaggacatcggatatc
ctttctaaatatctgcctgtgaagattgagcaggtggtttgttgcaggctgacacctctt
cagacagagttgtacaagaggtttctgcgacaggccaaaccagcagaagagttgtgtgag
ggcaagatgagtgtgtcttccctttcttctatcacctctctaaagaagctttgtaatcat
ccagctctaatctatgataaatgtgtcgaagaggaggatggctttgagggtgccttgaac
atctttccccctggttatagctctaaggctgttgagccccagctgtcaggtaagatgcta
gtccttgattacatcctggcagtgactcgaagccgcagcagtgacaaagtagtgctggtg
tccaattacacccagacgctggatctctttgaaaagctctgtcgggctagaaggtacttg
tatgtacgcctggatggcacgatgtccattaagaagcgagccaaggttgtggaacgcttc
aatagtccaacgagtcctgactttgtcttcatgttgagcagcaaagctggtggctgtggc
ctcaatctcattggagctaaccggctggtcatgtttgatcccgattggaacccagccaat
gatgaacaagctatggcccgggtctggcgtgatggtcaaaagaagacctgctatatctat
cgtctgctctctgcaggaaccattgaggagaaaatcttccagcgtcagagccacaagaaa
gctctgagcagctgtgtggttgatgaggagcaggatgttgagcggcacttctctctaggc
gagttgaaggagctgtttaccctggatgagactagcctgagtgacacacatgacaggctg
cactgccgccgttgtgtcaataaccgccaggtgtggccaccccctgatggttctgattgt
acgtcagacctggctcaatggaaccacagtactgataagcgggggctccaggatgaggta
ctccaggctgcctgggatgctgcctccactgccatcaccttcgtctttcaccagcgttcc
catgaggagcaacggggtgtccactga
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