Ochotona princeps (American pika): 101528787
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Entry
101528787 CDS
T07609
Symbol
TRIP11
Name
(RefSeq) thyroid receptor-interacting protein 11
KO
K23368
thyroid receptor-interacting protein 11
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101528787 (TRIP11)
Membrane trafficking [BR:
opi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
101528787 (TRIP11)
Retrieval pathways
101528787 (TRIP11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
ATG16
Motif
Other DBs
NCBI-GeneID:
101528787
NCBI-ProteinID:
XP_004584616
LinkDB
All DBs
Position
20:7201182..7257140
Genome browser
AA seq
1986 aa
AA seq
DB search
MASWLGGISSGLGQSLGQVGGSLASLTGHISNFTKDMLLEGAEEVGELSTSRKSEIEALH
SILKSENERLKKLCTDLEEKHETSELQIKQQSASYRGQLQQKEVEISHLKARQAALQDQL
LKLQSVHSGAGSVPATSSAFSYGASHHTSAFHNDDMDFIDIISSQEEINRLSSEVSRLES
EVGHWKNIAEISEAKGTHSSDQNEVYKLQCIINELKQNQSQEIDNYQHEMAVLQDTYQVK
LAEVTRRHREEIRGREERIEELEQLLEQGGSGADHAKVSEMPKSIEVLQTEKTESSQKIN
ELEGEIKDITQRLTSAENDRDILKREHEQLNVEKRQILEDYKTLRVEFERLASYAERPVE
LAAGGETVPSAVTEEVLRLRQALAERSLNVHVTHRLSITVRSLSTSVTFSHSFHFKLAIS
DLFQHDLKPVYFIMLADKRDSTGGESFASLVLDLLPKKSLAKLSSEYEDIKSIDGRNLNS
ELHNLKLNLEAKERELNQSIGEKEILMAELEELDKQNQEATKHIILMKDQLSKQQNEGEV
IISKLKEDLDHEKKRVHQLEHDKENISEELEEERKNLIQNDKELCALHLTKQELEDKVQD
LVDQLNKAQKNNEGIQKENVELKECIRQNEEELNRIKKELVLHQDLISNNCNDNLLKEKE
IELRNLKQKLSEVQECDENLQKIAFDLRIENEKLILACEQVKHELEESVTVNNQVSLEKD
MIVETLTREKEQLEAQLRGAEKRLSEEAGRHRQSLEELSSAHALDSSALKLEQERLLKLN
QEKDLEIAALKTNIKQMDTSHKHTEELLSSSLEKQEQLTHVINEQENCIENLQEKSSELQ
AELDKYIETSKKNEVLQQTIEEKDRSLGCIKEEINHLQEELERLREQQSRAAPGAEPRPP
DSMAELESEVTQLTIIKGQLEEEIKQHQKIIEDQKQSKRQLLQSLQEQKKEMEECKYQYE
QMNATHTQLFLEKDEEIKNLQKTIEQIKTQLPEEGQDIPPKNCDIFPVAKVQNVSVENES
EKHDLSKAETEELVKGIQERDLEIKLLHEKNISLTKQIDQLSRDEVGKLTQIIQQKDLEI
QALHAKISSPSYSQDILALQQQLQAYATEREQVLAVLSAQTRENSHLKMEYHKMMDIVSA
KEAALIKLQDENKLMSSRFENTSQEMFRETLQNLSWIIREKDIEVEALQQKCETLLTVLQ
TCGTSNEAGGVNSDQFEKLLQERDKLKQQVKKMFEWKQQVTTTVQNMHHELAHLQEELLQ
VQAQMLVNSDCSDKLQGNYDDLIQNYEQNENKLKNLRHELAQMQHYFGQLCNAKDLFLGK
LDSISPPPLTGSLSPCEAAGPLGAYESDRTRETSPSLQQEVEELRRSLKERETCIRTLQE
NNQQLSDSVAAAAELGRKEHEQHDSELGQLKHRYDVLQNLLQEKDLLLKDQSSQLRSSSE
DLTNKVNENELLRQAVTNLKERILILEMEISKLKDENDKIVEEARGKENEYQALQEANMH
ISVMLREKEAECHSLKDRAVAFEQLLKEKEQGKAGELNQLLNTVKSMQEKVVTVQQERDQ
VLLALKQKQMETSAFQNEVRHLHDKETRLNQELERLRNHLLESEDSYTKEILAAEQREAK
VREKVTVLEKKLVSSSNAMENARHQANVQIESLQEQLNTVSKQRDEGAVQLSAAQEELKQ
SAVSIRNLQMVLEHFQHEEKFRYSAEVEKQKQLITEWKDKAEDLQVKVNALQERLDEANA
ALESASRLTERLELKEGEIEQLKNLNQLQQEMLDDVQKKLMNVLNSTDGKVDKVLMRNLF
IGHFHTPKSQRPEVLRLMGSILGMEREEMDELFKEDQGGVTRWMSGWLGGGSKSVPNTPL
RPNQQSVLNNSFSELFVKFLETESHPYVPPPKLSVDEMKPLGSLGTRLGTETLKDSANSR
SGRSDVKPFLATRSDAVPLISPAGLGLGRPGHLLLKPLTDVLPTFTPLPVSPDNSAGAVL
KNLLKQ
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctggctagggggcatcagctctggtctaggccaatccctggggcaagtgggg
ggcagcttggcgtccctcactggccatatctcgaattttaccaaggatatgctactggaa
ggagcggaggaagtaggagaattatcaacttctagaaaaagtgaaattgaagcccttcat
tcgatcttaaaatcagagaatgaaaggctcaaaaaactatgtactgatcttgaagagaaa
catgaaacatcagagcttcaaataaaacagcagtcagcaagttacagaggccagctgcag
cagaaagaggtggaaatcagccaccttaaagccagacaggcagcgctgcaggaccagcta
ctaaagctgcagtcagtccactcgggagctggcagcgtccctgccacatcatctgcattc
agctacggggccagtcatcacacgtcagcattccacaatgacgacatggactttattgac
ataatttcctcacaagaagaaattaaccggctgtccagtgaagtttcgaggctggaatct
gaggttggccactggaaaaacatagccgagatttctgaggccaaaggaacacacagttct
gatcaaaatgaagtctataaacttcagtgtatcattaacgaacttaaacaaaatcaaagt
caggaaattgataactaccaacatgaaatggcggtattgcaagacacgtatcaggtgaaa
ctggctgaggtaactcgtcgacatcgagaggaaatccgtggccgtgaggaacgaattgag
gagcttgagcaactattagagcaaggtggttcaggagctgaccacgctaaagtctccgag
atgccaaagtccatcgaagtattgcaaacagaaaaaactgaatcctcccaaaaaatcaat
gaactggagggtgaaataaaagacataactcaaagattaacttccgctgaaaatgacagg
gatattttgaagagagaacacgaacagctgaatgtagaaaagcgacaaatcttggaagac
tataagaccttgcgagtggagtttgagaggctggcgtcgtatgctgagagacccgtggag
cttgcggcgggcggggaaaccgtgccgagtgcagtgacggaggaagtgctcaggctccgg
caggccctggctgaacgaagtctgaacgtccacgtcacacatagactgtccatcacggtc
cggtccctgtctaccagtgtcacctttagtcattctttccattttaaactagcgatttct
gacctatttcagcatgatttaaagcccgtgtatttcataatgcttgctgacaaacgagat
agcacaggtggagaatccttcgcgtctctagtcctggaccttttgcccaaaaaatcactt
gcaaaattaagcagtgaatatgaagacattaaaagtatagacgggagaaatttgaattca
gagttacataatctaaaacttaacttggaggcaaaagaacgggaactcaatcagagtatt
ggtgaaaaggaaatactgatggctgagttggaagaattggacaagcagaatcaagaagct
acaaagcatataattttaatgaaagatcagctatcaaaacaacaaaatgaaggcgaggtc
atcatcagtaaactgaaagaagatctggatcatgaaaaaaagagagttcaccagcttgag
catgacaaggaaaacatctctgaagaattggaggaggagagaaaaaacttaattcagaat
gacaaggaactgtgtgctttgcatttaaccaaacaggagctcgaagataaagtacaagat
ttagttgatcagctaaataaagcacagaaaaacaatgaaggcatccagaaagagaatgtt
gagctcaaagaatgcattcgacaaaatgaggaggagcttaatagaattaaaaaagaatta
gttcttcaccaagatttaattagtaataattgtaacgataatttacttaaagaaaaggaa
attgaactaagaaacttaaagcagaaactttcagaagtacaagaatgtgatgaaaattta
cagaaaattgcctttgatctcagaatagaaaatgagaagttgattttggcatgtgaacag
gtgaaacatgaattggaggagtctgttactgtaaacaatcaggtttctttagaaaaagac
atgattgtggagaccctgacaagggaaaaggagcagctagaagctcagttacgtggcgct
gagaagaggctgtcggaggaggccggcaggcacaggcagagcctcgaggagctgtccagc
gcacacgcgttggattcctctgcccttaagctggaacaggaacgtttactgaaactcaat
caggagaaagacttggaaatagcggctctgaaaacgaatattaagcaaatggacaccagt
cataaacataccgaagagcttttgtcatctagtttagaaaagcaggagcagttgacacat
gttataaatgagcaggaaaattgcattgaaaatcttcaagaaaaaagttcagagctgcag
gcggaattggacaaatatattgagacttctaaaaagaatgaagttttacaacagaccata
gaggaaaaggatagaagcctgggctgcattaaagaagaaattaatcatctccaggaggag
ctcgagcggctcagggagcagcagagtcgggctgcgcccggggccgagcccagacccccc
gacagcatggccgaactagagtcagaggtgacccaactgaccattatcaagggacagctt
gaagaagagattaaacaacatcaaaagatcattgaagatcaaaagcagagtaagaggcag
ctgcttcagtctctgcaggagcagaagaaggagatggaggagtgtaagtaccagtatgag
cagatgaatgccacacatacacagctgttcttagagaaagatgaggaaattaagaacctg
cagaaaacaattgaacagatcaaaacccagctgcccgaggaaggacaggatatcccaccc
aaaaactgtgatatctttcctgtagcaaaagttcaaaatgttagcgtggaaaatgaaagt
gaaaagcatgatttatctaaagcagaaacggaagagttagtaaaaggaatacaagagcga
gatttggagattaagcttctacatgaaaagaatatatctttaactaaacagattgaccag
ctatcaagggatgaagtaggaaagctaactcagattattcagcaaaaagatttggagatc
caagctcttcatgctaaaatctcttcgccgtcctactcccaggacatccttgcccttcag
cagcagctgcaagcctacgctacggagagagagcaggtattagctgttctcagtgcccaa
acgagggaaaacagccatctcaaaatggagtatcacaaaatgatggacatagtgtctgcc
aaagaggcagccctgattaaacttcaagatgaaaataaactaatgtcctccaggtttgag
aacaccagccaagaaatgtttagagaaacgcttcagaatctatcatggatcataagagaa
aaggacattgaggtagaggcattacagcaaaaatgcgagactttattgactgtcctgcaa
acctgtggcaccagtaacgaggccgggggtgttaacagtgatcagtttgaaaagctgtta
caggaacgtgataagttaaagcaacaggtaaaaaaaatgtttgagtggaaacagcaagta
acgactaccgtgcagaatatgcatcacgagttggcccacctccaggaagagctgcttcag
gttcaagctcaaatgttggtgaacagcgactgtagtgataaattacaaggcaactatgat
gacctgatacagaattatgaacaaaatgaaaacaaactaaaaaatttgaggcacgagttg
gcacaaatgcagcactattttgggcaactctgcaatgccaaagaccttttcttaggaaaa
cttgatagcatttcacccccaccgctcactgggtcattgtctccttgtgaggcagcaggg
cctcttggagcctatgagtctgatagaaccagggagacttccccatcgcttcagcaagag
gtagaagagctaaggagatccctgaaagaaagagaaacctgcatcagaactctgcaggag
aataaccaacagctgtctgactcggtcgcggccgccgcagagctgggaaggaaggaacac
gagcagcacgactcggagctcgggcagctgaagcacaggtatgatgtgctgcaaaacctg
ctccaggagaaagacctgctcctcaaggaccaaagcagccagctgcgctcttccagtgaa
gacttgaccaacaaagtgaatgagaatgaacttttgaggcaggcagtaacaaacctgaag
gagagaatactaattttagaaatggagatttcaaaactgaaggacgaaaatgacaaaata
gtagaagaggctagggggaaggaaaatgaatatcaagcattacaagaggctaacatgcac
atctctgtgatgctgcgagaaaaagaggccgagtgccactcactgaaggacagagctgtt
gcttttgagcaactgctgaaggagaaagaacagggcaaggccggagaattaaatcaactt
ttaaatacggttaagtcgatgcaggagaaggtggtaacggtccagcaggagagagaccaa
gtcctgctggccctgaagcagaagcagatggaaaccagtgccttccaaaatgaggttcga
catttacatgacaaagaaacgcggttaaaccaggaattagagcggctgcggaaccacctg
ttagaatcagaagattcttacacaaaagaaattttggctgctgaacagagagaggccaaa
gttagagaaaaagtcacggttttggaaaaaaagctagtttcatcctcgaatgcgatggaa
aatgccaggcatcaagccaacgtgcagatagagtcattgcaggagcagctgaacacagtc
tccaagcagagggacgagggtgccgtacaactctctgcggctcaggaagagctgaaacag
tccgccgtgtccatcaggaacctgcagatggtgctcgagcacttccagcatgaggaaaaa
tttaggtattctgctgaagtagaaaaacagaagcagcttataactgagtggaaggacaag
gcagaagacctgcaagtgaaagtgaatgccttacaagaacgtttggatgaagcaaatgct
gcattggagtcagcatcaagactgacagaacgattagagctcaaagaaggagaaattgaa
caacttaaaaacctaaatcagcttcaacaagaaatgttggatgatgtacaaaagaaattg
atgaatgtgttaaacagcacggatggaaaagtggataaagtattgatgagaaacctcttc
attggacatttccacaccccgaaaagtcagcggcctgaagtgctgcgtttgatggggagc
attctgggcatggagagagaagagatggatgagttgtttaaagaagaccaaggcggcgtt
acaagatggatgagcgggtggctcggaggaggatccaaaagtgtccccaacacacctctg
agaccaaaccagcagtctgtgttaaacaattctttttcagaactttttgtcaaattttta
gaaactgaatcacacccatatgttccaccaccaaaactttctgttgatgagatgaaacct
ctaggttccctgggaacaagactgggcacagaaactcttaaagattcagccaattccagg
tctggtagaagtgatgtgaaaccgttcttggctacccgctcggatgctgtgccccttatt
agccctgctggacttggtctgggcagacccggccaccttctccttaagcccctgacggac
gtgttacctacatttacgccgctgccagtgtcgccagacaacagcgctggagctgtgtta
aaaaatctgttaaagcagtag
DBGET
integrated database retrieval system
