KEGG   Ochotona princeps (American pika): 101528806
Entry
101528806         CDS       T07609                                 
Name
(RefSeq) ubiquitin-60S ribosomal protein L40-like isoform X1
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
opi  Ochotona princeps (American pika)
Pathway
opi03010  Ribosome
opi04120  Ubiquitin mediated proteolysis
opi04137  Mitophagy - animal
opi04140  Autophagy - animal
opi05012  Parkinson disease
opi05022  Pathways of neurodegeneration - multiple diseases
opi05167  Kaposi sarcoma-associated herpesvirus infection
opi05171  Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:opi00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    101528806
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101528806
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    101528806
   04137 Mitophagy - animal
    101528806
 09160 Human Diseases
  09172 Infectious disease: viral
   05171 Coronavirus disease - COVID-19
    101528806
   05167 Kaposi sarcoma-associated herpesvirus infection
    101528806
  09164 Neurodegenerative disease
   05012 Parkinson disease
    101528806
   05022 Pathways of neurodegeneration - multiple diseases
    101528806
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:opi03011]
    101528806
   04121 Ubiquitin system [BR:opi04121]
    101528806
Ribosome [BR:opi03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    101528806
  Archaea
    101528806
Ubiquitin system [BR:opi04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   101528806
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 DUF2604 OTU1_UBXL Ubiquitin_5 TBK1_ULD
Other DBs
NCBI-GeneID: 101528806
NCBI-ProteinID: XP_036349956
LinkDB
Position
12:44639152..44639560
AA seq 127 aa
MQIFVKTLTGKTITLEVEPSDTIENVKTKIQDKEGIPPDQQRLIFASKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSPRQLAQKYNCDKMICRKRYARLHPRAVNCRKKCGHTNNL
RPKKKVK
NT seq 384 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtaaagaccctgacgggcaagaccatcaccctcgaggtggagcccagc
gacaccatcgaaaacgtcaagaccaagatccaggacaaggagggcatccccccggaccag
cagcgtctcatctttgccagcaagcagctggaggatggtcgcactctgtccgactacaac
atccagaaagagtccacgctgcacctggtgctccgcctgcggggtggcatcatagagcct
tccccgcgccagctggcccagaagtacaactgtgacaagatgatctgccgcaagcgctac
gcccgcctgcacccccgcgcggtcaactgccgcaagaagtgcggccacaccaacaacctg
cgccccaagaagaaggtcaaataa

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