Ochotona princeps (American pika): 101528820
Help
Entry
101528820 CDS
T07609
Symbol
ABCA2
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 2
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
opi
Ochotona princeps (American pika)
Pathway
opi02010
ABC transporters
opi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101528820 (ABCA2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
101528820 (ABCA2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
opi02000
]
101528820 (ABCA2)
Transporters [BR:
opi02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
101528820 (ABCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC2_membrane_3
AAA_23
Motif
Other DBs
NCBI-GeneID:
101528820
NCBI-ProteinID:
XP_004593679
LinkDB
All DBs
Position
Unknown
AA seq
2244 aa
AA seq
DB search
MALGAARAPLGAQGPGRPQAAALCQPLPARAPLGAGPCPGRQWVLAFELFIPLVLFFILL
GLRQKKPTISVKEVSFYSAAPLTSAGILPVMQSLCPDGQRDEFGFLQYANSTVTQLLERL
SRVVEDSNLFDPARPSLGSELEALRERLEALSAGQGAWESDSDRSPASGFALASVARDPR
ELSRFLVQNLSLPNSTAQALLAARVDPPEVRRLLFGPRPALGAESAFPGAQEPWSRLGGS
PLFRMEELLLAPALLERLTCSGELGHLLVLPPGQQAALQGYRDTVCSGQAVARAHRFSGL
AAELRSQLDLAKIAQQLGLAAPNGSDPQQPVPPPQRLQALLGDLLDAQKALQDVDVLSAL
ALLLPQGACSGRASASSSSSPGGAANGTGLGTNATAEEGTPAAVAPATTDTLQGQCSAFV
QLWAGLQPILCGNNRTIEPEALRSGNMSSLGFTSKEQRNLGLLVHLMTSNPKILYAPAGS
EADRVILKANETFALVGNVTHYAQVWLNTSAEIRSFLEQDRLQQHLRWLQQYVAELRLRP
EAMNLSLDELPPALRHDNFSLPNGSALLQQLDTIDNAACGWIQFMSKVAPLAPAAQWSIT
PIMYPASFWFEVPSSAYVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLI
FPNYNLGHGLMEMAYNEYINEYYAKIGQWDKVRSPFEWDIVTRGLVAMTAEGFVGFLLTL
MCQYNFLRQPQRMPVSTKPVDKASLPTLSPRRMPVSTKPVEDDVDVASERQRVLRGDADN
DMVKIENLTKVYKSRKTGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTT
GGVIFQTRKDGSLPPHVHYKIRQNSSFTEKTNEIRRAYWRPGPNTGGRFYFLYGFVWIQD
MMERAIINTFVGHDVVEPGSYVQVFPYPCYTRDDFLFVIEHMMPLCMVISWVYSVAMTIQ
HIVAEKEQRLKEVMKTMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGQVLLHSHVLI
IWLFLAVYAVATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKITA
FEKCIASLMSTTAFGLGSKYFALYEVAGVGIQWHTFSQSPVEGDDFNLLLAVTMLMVDAL
VYGVLTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRTEAWEWSWPWAQAPRLSVMEEDQ
ACAMESRRFEETRGMEEEPGHLPLVVCVDRLTKVYKNDKKLALNKLSLNLYENQVVSFLG
HNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEH
LWFYSRLKSMAQAEIRKEMDKMIEDLELSNKRHSLVQTLSGGTKRKLSVAIAFVGGSRAV
ILDEPTAGVDPYARRAIWDLILKYKPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGS
PLFLKGAYGDGYRLTLVKRPAEPGGPQEPGLASSPAGRAPLSNCSEPQVSRFIRKHVASC
LLVSDTSTELSYMLPSEATKKGAFERLFQSLECSLESLHLSSFGLMDTTLEEVFLKVSEE
DQSLENSEADGKESPKDVLPGAEGLASGEGQAGNLAQCAELARSQASLHSASSVGSVRGD
EGAGYADVCGDYHPLLDNPQDSDNVSLQEPEVDAPLQEGQGRKLQGWWLKARQFHGLLVK
RFHCARRNSKALCSQILLPAFFVSVAMTVALSVPEIGDLPPLVLSPSQYHNYTQPRGNFI
PYANEERREYRLRLSPDASPQQLVGTFRLPSGIGATCVLKSPANGSLGPLLNLSSGESRL
LAARFFDSMCLESFTQGLPLSNFVPPPPSPAPDDDLLQARNSSQPPTAGPEPWTSAPSLP
RLVREPVRCTCSAQGTGFSCPSSVGGHPPQMRVVTGDILTDITGHNVSEYLLFTSDRFRL
HRXGAGVLRELLQVQQSVGYCPQFDALFDELTAREHLQLYTRLRGVPWKDEARVVRWALE
KLELTKYADKPAGTYSGGNKRKLSTAIALIGSPAFIFLDEPTTGMDPKARRFLWNLILDL
IKTGRSVVLTSHSMEECEALCTRLAIMVNGRLCCLGSIQHLKNRFGDGYMITVRAKSSQN
VKDIVRFFSRNFPEAVLKERHHTKVQYQLKSEHISLAQVFSKMEQVVGVLGIEDYSVSQT
TLDNVFVNFAKKQNDSLEQQEAEPPSALQSPLGRLLSLLRPRSAPTELRALAADEPEDLD
TEDEGLISFEEERAQLSFSTDTLC
NT seq
6735 nt
NT seq
+upstream
nt +downstream
nt
atggcccttggggcagctagggcgcccctgggtgcgcagggcccgggtcgcccccaggcc
gcggcgctgtgccagccactccctgccagggctccgctgggggctgggccctgtcccggg
cgccagtgggtcctggccttcgagctcttcatcccactcgtcctcttcttcatcttgctg
gggctgcggcagaagaagcccaccatctctgtgaaggaagtctccttctactcagctgcg
cccctgacctcggccggcatcctacctgtcatgcagtcgctgtgcccagatggccagcgg
gacgagtttggcttcctgcagtatgccaactccacggtgacccagctgctggagcgcctc
agccgcgtggtggaggacagcaacctgtttgacccggcgcggcccagcctgggctctgag
cttgaggccctgcgtgagcgcctggaggccctcagtgccggccagggtgcttgggagagc
gactcagacagatctccagcttccggcttcgcgctggcctcagtggccagggacccgagg
gaactctcgcgtttcctggtacagaacctgtcactgcccaacagcactgcccaggccctg
ctggccgccagggtggacccaccggaggtccgccgccttctgtttggccctcgacctgcc
ctgggtgcagaatcagccttccctggggctcaggagccctggagccgcctgggtggcagc
cccctgtttcggatggaggagctgttgctggcccctgccctgttggagaggctcacgtgt
tctggggagctgggccacctcctggttctgcccccgggccagcaggcagcactgcagggc
taccgggacaccgtgtgtagtgggcaggcggtggcgcgagctcaccgcttctccgggctg
gccgccgagctccggagccagctggacctagccaagatcgcccagcagttgggcctggct
gctcccaacggctcggacccccagcagccagtgccgcccccacagaggctgcaggcactg
ctcggggatctgctggacgcccagaaagccctgcaggacgtggacgtgctgtcagcgctg
gccctgctgctaccccagggtgcctgctctggccgcgcgtcagcctcatcctccagcagc
cccgggggagcagccaacggcacagggctgggcaccaacgccacagctgaggagggcacg
ccagccgccgtcgccccggccaccacggacaccctccaaggccagtgctcggccttcgtt
cagctctgggccggcctgcagcccattctctgtggcaataaccgcaccattgagcccgag
gctctgcgcagcggcaacatgagctcactggggttcaccagcaaggagcagcggaacctg
ggcctcctggtgcacctcatgaccagtaaccccaagatcctgtacgcgccagccggctcc
gaggccgaccgtgtcatcctcaaggccaacgagacgtttgctctggtgggcaacgtgaca
cactacgcacaggtctggctcaacacctcagctgagatccgcagctttctggagcaggac
cggctgcagcagcatctgcgctggctgcagcagtatgtggcagaactgcgactgcggcca
gaggccatgaacctgtcgctggacgagctgccgcctgccctgcggcatgacaacttctcg
ctgcccaacggctctgccctcctgcagcagctggacaccatcgacaatgcggcctgcggc
tggatccagttcatgtccaaggtggccccactggcacctgctgcccagtggtccatcaca
cccatcatgtaccccgcctccttctggtttgaggtgcccagctctgcctatgtgttcctc
atagtcatcaacctcttcatcggcatcacggccaccgtggccaccttcctgctgcagctc
tttgagcatgacaaggacctgaaggtggtcaacagttacctcaaaagctgcttcctcatc
ttccccaactacaacctgggccacgggctgatggagatggcctacaacgagtacattaac
gagtactacgccaagatcggccagtgggacaaggtgaggtcaccgttcgagtgggacatc
gtcacgcgagggctggttgccatgacggccgagggcttcgtgggtttcctgttgaccctc
atgtgccagtacaacttcctacgccagccacagcgcatgcccgtgtccaccaagccagtg
gacaaggcctcactgcccaccctgtcccccaggcgcatgcccgtgtccaccaagccggtg
gaggacgacgtggacgtggccagtgagcgccagcgcgtgctgcggggggacgccgacaat
gacatggtcaagattgaaaacctgaccaaggtgtacaagtcccgcaagactgggcgcatc
ctggccgtggaccgtctgtgcctcggtgtccggcctggcgagtgcttcggcctcctgggc
gtgaatggcgcgggtaagaccagcaccttcaagatgctcacgggggacgagagcaccacg
ggaggtgtcatctttcagacccggaaggacggctctcttccacctcacgtccactacaag
atccgccagaattctagcttcacggagaaaaccaacgagatccgccgggcctattggcgc
ccgggccccaacacgggaggccgcttctacttcctctacggcttcgtctggatccaggac
atgatggagcgcgccatcatcaacacctttgtgggccacgacgtggtggagccgggcagc
tacgtgcaggtgttcccgtacccctgctacacacgcgatgacttcctgtttgtcatcgag
cacatgatgccactctgtatggtcatttcctgggtctactcggtggccatgaccatccag
cacatcgtggctgaaaaggagcagcggctcaaggaggtgatgaagaccatgggcctgaac
aacgcggtgcactgggtggcttggttcatcaccggcttcgtgcagctgtccatctcggtg
acggcgctcacggccatcctcaagtacggccaggtgctgctgcacagccacgtgctcatc
atctggctcttcctggctgtctacgctgtggccaccatcatgttctgtttcctggtgtct
gtgctgtactccaaggccaagctggcctcagcctgtggtggcatcatctacttcctgagc
tacgtgccctacatgtatgtggccatccgggaggaggtggcccacgataagattacggcc
ttcgagaagtgcatcgcgtccctgatgtccaccacggcctttggcctgggctccaagtac
ttcgcactctacgaggtggccggtgtgggcatccagtggcacacgttcagccagtcccct
gtggaaggagatgacttcaacctgctgctggccgtcaccatgctgatggtagacgccttg
gtgtacggtgtgctcacttggtacattgaggccgtgcacccaggcatgtacgggctaccc
cggccctggtacttcccactgcagaagtcttactggctgggcagtgggcggaccgaggcg
tgggagtggagctggccgtgggcccaggccccccgcctcagcgtcatggaggaggaccag
gcctgtgccatggagagccggcgcttcgaggagacccgaggcatggaggaggagcccggc
cacctgcccctggtggtgtgcgtggacaggctgaccaaggtctacaagaatgacaagaag
ctggcactcaataagctcagcctgaacctgtacgagaaccaggtggtttccttcctgggc
cacaacggggctggcaagaccaccaccatgtccatcctgaccggcctgttcccacccacg
tcgggctcggccaccatctacgggcacgacatccgcacggagatggacgagatccgcaag
aacctgggcatgtgcccgcagcacaacgtgctgttcgaccgcctcacggtggaggagcac
ctgtggttctactcacggctcaagagcatggcgcaggccgagatccgcaaggagatggac
aagatgattgaagacctggagctgtccaacaagcggcactcgctggtgcagacgctgtcg
ggtggcaccaagcgcaagctctccgtggccattgccttcgtgggtggctcccgggctgtc
atactggacgagcccacggccggcgtggacccctacgcccggcgtgccatctgggacctc
atcttgaagtacaagcccggccgcaccatcttgctgtccacacaccacatggacgaggcc
gacctgctgggagaccgcatcgccatcatctcccacgggaagctcaagtgctgtgggtcc
ccgctcttcctcaagggcgcctacggcgacgggtaccgcctcacgctggttaagcggcct
gccgagcctgggggtccccaagagccaggactggcctccagccccgctggccgtgccccg
ctgagcaactgttcggagccgcaggtgtcacggttcatccgcaagcacgtggcctcctgc
ctgctggtgtcggacaccagcactgagctctcctacatgctgcccagtgaggccaccaag
aagggggccttcgagcgcctcttccagagcctggagtgcagcctggagtcgctgcacctg
agcagcttcgggctgatggacacgacactggaggaggtgttcctgaaggtgtcggaggag
gaccagtcactggagaacagtgaggctgatgggaaggagtcaccgaaggacgtgctgccc
ggggctgagggcctggcgtccggcgagggccaggctggcaacctggcacagtgtgcggag
ctggcccggtcccaggcctcgctgcactcagcgtcctccgtgggctctgtgcggggtgac
gagggagctggctatgccgatgtctgtggtgactaccacccgctgcttgacaacccgcag
gactctgacaacgtcagcctgcaagagccggaggtggacgccccactgcaggagggccag
ggccgcaagctgcagggctggtggctgaaggcacgccagtttcacgggctgctggtcaag
cgcttccactgtgcccgccgcaactccaaggcgctctgctctcagatcctgctgcccgcc
ttcttcgtctctgtggccatgactgtggccctgtctgtccccgagatcggggacctgccc
ccgcttgtgctgtccccctcacagtaccacaactacacgcagccccgcggcaactttatc
ccctacgccaacgaggagcgccgggagtaccggctgcggctgtcccccgacgccagcccc
cagcagctggtgggcaccttcaggctaccgtcgggcattggcgccacctgcgtgctcaag
tccccggccaatgggtccctgggcccgctgctgaacctgagcagcggagagtcgcggctg
ctggcggcacgcttcttcgacagcatgtgcctggagtccttcacgcaggggctgccgctc
tccaactttgtgccaccgccgccgtcacccgcaccggacgacgacctgctgcaggcccgc
aacagctctcagccgcccacggcggggccagaaccgtggacatcggcgccgtcgctgccg
cgcctggtgcgggagccagtgaggtgtacctgctctgcacagggcactggcttctcctgc
ccgagcagcgtggggggccacccgccacagatgcgcgtggtcactggtgacatcctgaca
gacatcacgggacacaacgtctcagagtacctgctctttacctccgaccgcttccggctg
caccggtgaggggctggcgtgctgcgggagctgctgcaggtgcagcagagcgtgggctac
tgcccgcagttcgatgcgctgttcgacgagctcacggcgcgggagcacctgcagctgtac
acaaggctgcgtggcgtgccctggaaggacgaggcgcgggtggtgcgctgggcgctggag
aagctggagctgaccaagtatgccgacaagccggccggcacctacagtggcggcaacaag
cgcaagctgtccaccgccatcgccctcatcggctcccctgccttcatcttcctggatgag
cccaccacgggcatggaccccaaggcccggcgcttcctctggaacctcatcctggacctc
atcaagacgggccgctcggtagtgctgacctcgcacagcatggaggagtgtgaggcgctg
tgcacacgcctggccatcatggtgaacggacggctgtgctgcctgggcagtatacagcac
ctgaagaaccgctttggggacggctacatgatcacggtgcgtgccaagagcagccagaac
gtcaaggacatcgtgcgattcttcagccgcaacttcccagaggcggtgctcaaggagcgg
caccacaccaaggtgcagtaccagctgaagtcggagcacatctcactggcccaggtgttc
agcaagatggagcaggtggttggcgtgctgggcatcgaggactattcggtcagtcagacc
acgctggacaacgtgttcgtgaacttcgccaagaagcagaacgacagcctggagcagcag
gaggcggagccgccgtcagccctgcagtccccgctgggccgtctgctcagcctgctgcgg
ccacggtcagcccccacggagctccgggcgctagcggccgatgagcctgaggacctggac
acggaggacgagggcctcatcagcttcgaggaggagcgggcccagctgtccttcagcacg
gacacgctctgctga
DBGET
integrated database retrieval system
