Ochotona princeps (American pika): 101528836
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Entry
101528836 CDS
T07609
Symbol
TMTC4
Name
(RefSeq) protein O-mannosyl-transferase TMTC4 isoform X1
KO
K23424
protein O-mannosyl-transferase [EC:2.4.1.-]
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
opi01003
]
101528836 (TMTC4)
Glycosyltransferases [BR:
opi01003
]
O-Glycan biosynthesis
O-linked Man type
101528836 (TMTC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TMTC_DUF1736
TPR_2
TPR_8
TPR_17
TPR_16
TPR_11
TPR_12
TPR_19
TPR_14
TPR_10
TPR_CcmH_CycH
TPR_9
TPR_Slam
TPR_15
ARM_TT21_C
TPR_MalT
NatA_aux_su
ARM_TT21_5th
ARM_ECM29_C
FAT
Motif
Other DBs
NCBI-GeneID:
101528836
NCBI-ProteinID:
XP_012782491
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Position
8:complement(65862732..65923696)
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AA seq
741 aa
AA seq
DB search
MAELDADLDLIVPSSLLPPGWAKLVVGLVALVCFARSYDGDFVFDDSEAIVNNKDLRAET
PLADLWLHDFWGSRLSSNSSHKSYRPLAVLTFRFNYYLSGGSYPMGFHVVNIILHGGVSV
LMVDVFSVLFGGLQFTSKGRRVHLAPRASLLAALLFAVHPVHTECVAGVVGRADLLCALF
FLLSFLGYCRAFRESNKEGTRSSTFWVLLSILLGAVAMLCKEQGITVLGLNAVFDILVIG
KVNVLELVHKVLRKRRLLESASVLRNGALLFRMALLTCGGAAVLYVRWKIMGTGPPAFTE
VDNPASFADSLLVRAINYNYYYSLNAWLLLCPWWLCFDWSMGCIPLIKSFGDWRVIALAA
LWLCLIGLIHQALCSEDSHRRRTLTLGLGFLVIPFLPASNLFFRVGFVVAERVLYLPSMG
YCVLLTCGLGALSRHTRKKKLVAAMVLGILALYALKCVVRSSEWRNEEQLFRSALSVCPL
NAKVHYNIGKNLADKGNQTAAIRYYREAVRLNPKYVHAMNNLGNILKERNELQEAEELLS
LAVQIQPDFAAAWMNLGIVQNSLKRFEAAERSYRTAIRHRRKYPDCYYNLGRLYADLNRH
VDALNAWRNATVLKPEHSLAWNNMIILLDSTGNLAQAEAVGREALELIPNDHSLMFSLAN
VLGKSQKYKESEALFLKAIKANPNAASYHGNLAVLYHRWGHLGLAKKHYEISLQLDPGAA
GTRENYSLLRRKLAQMQKKEG
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggctgagctggatgccgatttggacctcattgtcccttcgtctctcctcccgcccggc
tgggccaagttagtggtgggacttgtggcccttgtgtgttttgcacggagctacgatgga
gattttgtctttgacgactcagaagcaattgttaacaacaaggacctccgagcagaaacg
cccctggcagacctgtggcttcacgacttctggggcagccggctgagcagcaactccagc
cacaagtcctaccgacccctcgccgtcctcacgttcaggttcaactactacctgtcagga
ggctcttaccccatgggtttccacgtggtcaacatcatcctgcatggcggcgtctccgtg
ctcatggtggacgtgttctcagtgctgtttggtggcctgcagttcaccagcaaaggccgg
agggtacacctggcccccagagcgtccctgctggcggctctgctgttcgccgtgcatcca
gtgcacactgagtgtgttgctggtgtcgttggccgtgctgacttgctctgtgccctcttc
ttcttgctgtcttttcttggctactgtagagcatttagagaaagtaacaaagagggaacg
cgttcttctaccttctgggtcttgctgagtatccttctgggagctgtggccatgctgtgc
aaggagcaagggatcactgtgctgggtttgaacgccgtgtttgacatcctggtgattggc
aaagtcaatgttctggagcttgtccacaaggtactgcgcaagcgcaggttgttagagagt
gccagcgtgctcagaaacggggccctgctcttccgaatggcgctgctcacctgcggaggt
gctgctgtgctctacgtgcgctggaagatcatgggtactggcccgcctgccttcaccgag
gtggacaacccggcctcctttgccgacagcctgctggtcagggccataaactataattac
tactattcattgaacgcctggctgctgctgtgtccctggtggctgtgttttgattggtcc
atgggctgcatccccctcattaagtccttcggggactggcgggtaattgcgctggctgca
ctctggctctgcctaattggcctgatacaccaagccctgtgctctgaagacagccacagg
agaaggaccctcacactgggcctgggcttcctcgttatccccttcctgccggcgagcaac
ctgttcttccgtgtgggctttgtggtggccgagcgagtcctctacctgcccagcatgggc
tactgcgtgctgctgacctgtgggctcggagccctgagcaggcacaccaggaagaagaag
ctcgtggccgccatggtcctggggattctggctctctatgctctcaagtgcgtggttcgc
agcagcgagtggcggaacgaggagcagctcttccgaagcgccctgtccgtgtgtcccctc
aacgccaaggttcactacaatattggcaaaaacctggctgacaaaggcaaccagacggcc
gccatccgatactaccgcgaggctgtcagattaaaccccaagtacgttcacgccatgaat
aatcttggaaacatcttgaaagagaggaatgaacttcaggaagctgaggagctgctgtcg
ctggccgtgcagatacagcctgactttgctgctgcttggatgaacctgggcatagtgcaa
aacagcctgaaacggttcgaggctgccgagcggagttaccggacagccatcagacacagg
aggaaatacccagactgttactacaacctcggacgcctgtatgcggacctcaaccgtcac
gtagatgcgctgaacgcctggagaaacgccaccgtgctgaagcccgagcacagcctggcc
tggaacaacatgatcatcctcctggacagcacaggtaatttagcccaagctgaagcagtt
ggaagagaggcgctggaattaatccccaacgatcactctctcatgttctcgttggcaaat
gtgctgggcaagtcccagaagtacaaggaatctgaagctttattcctcaaggcaattaaa
gcaaatccgaatgctgcaagttaccatggcaatttagctgtgctctatcaccgctgggga
cacctcggcttggccaagaagcactatgagatctccctgcagctggaccccggggcggca
gggacgagggagaattacagcctgctgagaagaaagctcgcgcagatgcagaagaaggag
ggctga
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