Ochotona princeps (American pika): 101528855
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Entry
101528855 CDS
T07609
Symbol
TWNK
Name
(RefSeq) twinkle protein, mitochondrial
KO
K17680
twinkle protein [EC:
5.6.2.3
]
Organism
opi
Ochotona princeps (American pika)
Pathway
opi05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
101528855 (TWNK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
opi03029
]
101528855 (TWNK)
Enzymes [BR:
opi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101528855 (TWNK)
Mitochondrial biogenesis [BR:
opi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
101528855 (TWNK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
DnaB_C
ATPase
AAA_22
AAA_16
AAA_29
AAA_23
T2SSE
TsaE
AAA_19
ABC_tran
nSTAND3
SMP_C2CD2L
cobW
AAA_7
PhoH
Motif
Other DBs
NCBI-GeneID:
101528855
NCBI-ProteinID:
XP_004580009
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All DBs
Position
18:complement(24288432..24290790)
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AA seq
582 aa
AA seq
DB search
MWGRLRGAYPLRVLLPLRGEWMARRGLPRSLGPGPPRRRYRKEALPATDVPVLPITTTEI
RQYLRTRGIPFQDGHSCLRAPSPFVGSSQAMDQPGATPSFSLFIDKTTGRFLCTASLAEG
SWEDFQASVEGRGDGAREGTLLSEPLEAEDSEEVRRIWDRAVPLWELPDQEEAQLTRVMF
GLNKVTDDTLRCFSVRYLRPARSLVFPWFCPGGSGLRGLKLLRAEGQGDAVNYVETTIPR
PGAYHNLFGLPLITRRDVEVVLTSRELDSLALYQSTGLPTLTLPRGTACLPPALLPYLEQ
FRRIFFWLGDDLRSWEAAKLFSRKLNSKRCSLVRPGEQQPRPLEALNRGLNLSRILRTAL
PAWHKSIVSFRQLREEVLGELSNVEQVAGVCWSRFPDLNRLLKGHRKGELTVFTGPTGSG
KTTFISEYALDLCTQGVNTLWGSFEISNVRLARVMLTQFAVGRLEDQLDKYDEWADRFED
LPLYFMTFHGQQSIKSVIDTMQHAVYVYDVCHVVIDNLQFMMGHEQLSTDRIAAQDYIVG
AFRKFATDNSCHVTLVIHPRKEDDDKELQTASIFGSAKVSGL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtggggccgcctccgaggggcataccccctccgtgtcctgctgcccctgcgtggggag
tggatggctcggaggggcctgccacgaagcttgggccccggccctcctcggcggcggtac
cggaaggaggctctcccagccactgatgtgccagtgttgcccataaccacgaccgagatc
cgccagtatttgcggacacgtgggatccccttccaggatggccacagctgcctgcgggca
ccaagcccctttgtggggtcctcgcaggccatggaccagccgggcgcaaccccttccttc
agcctcttcatcgacaagaccacgggtcgattcctgtgcaccgccagcctggcagagggc
agctgggaagacttccaggccagcgtggagggtagaggggatggggccagagaagggacc
ctgttgagtgagcccctggaggctgaggacagcgaggaggtccgcaggatctgggaccga
gcggtccctctctgggagctgccagaccaagaggaggcccagctgactcgggtgatgttc
ggccttaacaaggtgacagatgacacgttgaggtgcttcagtgtgcgctacctacggcca
gctcgcagcctggtctttccttggttctgcccagggggctccggattaaggggcctgaag
ttgctgagggccgaaggccagggggatgcggtgaattacgtggaaaccaccattccccgg
cctggggcctaccataacctgttcgggttaccactgattactcgccgcgatgtggaggtg
gtcctgaccagtcgggagctggacagcctggccttgtaccagtccacaggcctgcccacc
ctaaccctcccccgaggcacggcctgcctaccacctgccctgctcccttacctcgaacaa
ttccggcgcatcttcttctggttgggggatgacctgcgctcctgggaagccgccaagctg
ttttcccgaaagcttaactccaagcgctgctcattagtgcggcctggggagcagcagccc
cgacccctggaagccctgaaccgaggcttgaatctttctcgaattctgcgcactgccctg
ccagcctggcacaagtccatcgtgtccttccggcagctgcgggaggaggtgctaggagaa
ctctccaacgtggagcaggtggctggtgtctgctggagccgctttccagacctcaaccgc
ctgctcaaagggcatcggaagggcgagttgactgtcttcacagggccgactggcagcggg
aaaacgacgttcatcagtgagtacgccctggacctgtgtacacaaggcgtgaacacgctg
tggggcagcttcgagatcagtaacgtaaggctggcccgggtcatgctcacgcagtttgct
gtggggcggctggaggatcaactggacaagtatgacgagtgggctgaccgcttcgaagac
ctgcccctctacttcatgactttccacgggcagcagagcatcaagtctgtgattgacaca
atgcaacacgcggtctacgtgtatgatgtatgtcacgtggtcatcgacaacctgcagttc
atgatgggtcatgaacagctgtccacagacaggattgcagctcaggactacatcgtcggg
gcctttcggaagttcgccacagacaatagctgccatgtgaccctggtcattcacccccgg
aaggaggacgatgacaaggaactacagacagcctccatttttggctcagccaaagtgagt
ggcctttag
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integrated database retrieval system
