Ochotona princeps (American pika): 101528871
Help
Entry
101528871 CDS
T07609
Symbol
DSCAML1
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
opi04515
]
101528871 (DSCAML1)
Cell adhesion molecules [BR:
opi04515
]
Immunoglobulin superfamily
DSCAM family
101528871 (DSCAML1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
Ig_6
V-set_CD47
Receptor_2B4
Interfer-bind
fn3_2
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
101528871
NCBI-ProteinID:
XP_004585173
LinkDB
All DBs
Position
1:complement(37857591..38163779)
Genome browser
AA seq
2118 aa
AA seq
DB search
MTGAGEPRREEPPPPPPSARLRSRENGASAGGWERAERGRGAAARPATGPPPRRIGPLYG
MWLVTFLLLLDSLHKARPEDVGSSLYFVNDSLQQVTFSSSVGVVVPCPAAGSPSAALRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENAAGKIRSPNIRVK
AVFREPYTVRVEDQRSMRGSVAVFKCLIPSSVQEYVSVVSWEKDTVSITPENRFFITSHG
GLYISDLQKEDALSTYRCITKHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVWAG
HTVELPCAASGYPIPAIRWLKDGRPLPADSRWTKRITGLTISDLRPEDSGTYICEVTNTF
GSAEATGILTVIEPLHVTLTPKKLKTGIGSTVILSCTLMGSPEFTIRWYRNTELVLPDEA
ISIRGLGNETLLIASAQKSHSGAYQCFATRKSQTAQDFAIIVLEDGTPRIVSSFSEKVVN
PGEQFSLMCAAKGAPPPTVTWALDDEPILRDGSHRTNQYTMSDGTTISHMNVTGPQIRDG
GVYRCAARNSVGSAEYQARINVRGPPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWYK
DALLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQ
PFEFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVS
LKHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPK
VMWKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKS
MFLTVKIPAMITSHPNTTIAIKGQAKELNCTARGERPIIIRWEKGDTVIDPDRVMRYAIA
TKDNGDEVVSTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKA
RSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSI
RMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIR
GYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSE
INATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWG
EMQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVPGPPAGIKAV
PSSASSVVVSWLPPTKPNGVIRKYTIFCSSPGSGQPAPSEYETSPEQLFYRIAHLNRGQQ
YLLWVAAVTSAGRGNSSEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGDPAPA
VKWTKDSEDSAIPVAMDGHRLIHTNGTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLV
QVPPDQPRLTVSKTSASSITLTWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSGERSF
KLDSLKCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNL
QGWSNGGCPITAIVLEYRPKGTWAWQGLRANSSGEVFLTELREATWYELRMRACNSAGCG
NETAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIGCPVILATLGVALLFIVRKKRKEKR
LKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKA
TIPVTDAEFSQAVNPQSFCTGVSLHHPALIQSTGPLIDMSDIRPGTNPVSRKNVKSAHST
RNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVS
TESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMST
PSEPGICRFTASPPKPQDADRGKNVAVPIPHRANKSDYCNLPLYPKSEAFFRKADGREPC
PVVPPREASIRNLARTYHTQARHLTLDPGSKPLGLPHPGAPASTSTATLPQRTLAMPAPP
AGTAPPAPGPAPAEPPAATATAAPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTSGV
GRPQKQGAGAYSKSYTLV
NT seq
6357 nt
NT seq
+upstream
nt +downstream
nt
atgacaggagccggggagccgaggagggaggagccgccgccgccgccgccgagcgctagg
ctgaggagccgagagaacggggcgagtgcgggcggctgggagcgcgctgagcgggggaga
ggcgctgccgcacggccggccacaggaccacctccccggagaatagggcctctttatggc
atgtggctggtaactttcctcctgctcctggactctttacacaaagcccgccctgaagat
gtcggcagcagcctctactttgtgaatgactctctgcagcaggtcaccttctccagctct
gtgggggtggtggtgccctgcccagccgcgggctcccccagcgcagctctccgatggtac
ctggccacgggggacgacatctacgacgtgccgcacatcaggcacgtccacgccaacggc
acgctgcagctctatcccttctccccctccgccttcaatagctttatccacgacaatgac
tacttctgcaccgcggagaacgccgccggcaagatccgaagccctaacatccgcgtcaaa
gcagtcttcagggaaccctacactgtgcgggtggaggatcaaaggtcaatgcgtggaagc
gtggctgtcttcaagtgcctcatcccctcttcagtgcaggaatatgttagcgttgtgtct
tgggagaaagacactgtctccattaccccagaaaacaggttttttatcacttcccatggc
gggctgtacatctccgacctgcagaaggaggatgcactctccacctaccgctgcatcacc
aagcacaagtacagtggagagacccggcagagcaacggggcccgcctctctgtgacagac
cctgctgagtccatcccaaccatcctggacggcttccactcccaggaagtgtgggccggc
cacaccgtggagctgccctgtgctgcctcgggctatcccatcccagccatccgctggctc
aaggacggccgacccctccccgctgacagccgctggactaagcgcatcaccgggctgacc
attagcgatctgcggcctgaggacagtggcacctacatttgtgaggtcaccaacaccttc
ggttcagcagaggccacaggcatcctcacggtcattgagcccctgcacgtgaccctgaca
ccaaagaagctgaagacgggcattggcagcacagtcatcctgtcatgcacactcatgggc
tcacctgagttcaccatccgctggtaccgcaacacagagctggtgctgcccgacgaggcc
atctctatccgtgggcttggcaatgagaccctgctcattgcttctgcccagaagagccat
tctggggcctaccagtgcttcgccacccgcaagtcccagactgcccaggacttcgccata
atcgtgcttgaggacggcacgccccgcatcgtctcatccttcagtgagaaggtggtcaac
cctggagagcagttctcgctgatgtgtgcagccaagggcgccccgccccccacggtcacc
tgggccctggacgacgagcccatcctgcgggacggaagccaccgcaccaaccagtacacc
atgtcggacggcaccaccatcagccacatgaacgtcacgggcccccagatccgtgacggt
ggcgtgtaccggtgtgcggcgcggaactcggtgggcagtgctgaatatcaggcgcgaata
aacgtaagaggtccccccagcatccgggcgatgagaaacatcactgcagtggccggccga
gataccctcatcaactgcagggtcatcggctacccctactactccattaagtggtacaag
gatgcactgctgctgcccgataaccatcggcaggtggtgtttgagaacgggaccctcaag
ctgaccgacgtgcagaagggcatggacgagggcgagtacctgtgcagtgtcctcattcag
ccccagctctccatcagccagagtgtccacgtggccgtcaaagtgccccctctgatccag
cccttcgagttcccacctgcctccattggccagctactctacatcccatgcgtggtgtct
tcgggggacatgcccattcgtatcacctggagaaaggatgggcaggtgatcatctcaggc
tcaggcgtgaccattgagagcaaggagttcatgagctccctgcagatctccagcgtctcc
ctcaagcacaatggcaactacacgtgcatcgccagcaatgctgcagccactgtgagcagg
gagcgccagctcatcgtgcgggtgccacctcggtttgtggtgcagcccaacaaccaggac
ggcatctacggcaaagctggtgtgctcaactgctcagtggatggctacccacctcccaag
gtcatgtggaagcatgccaaggggagtgggaacccccagcagtaccaccctgtgcccctc
accggccgcatccagatcctacccaacagctcgctgctgatccgtcacgtcctggaagag
gacatcggctactacctctgccaggccagcaacggcgtgggcaccgacatcagcaagtcc
atgttcctcaccgtcaagatcccagccatgatcacatctcaccccaacacaaccattgcc
atcaagggccaggccaaggagctgaactgcacagcgcgcggtgagcgacccatcatcatc
cgctgggagaagggggacactgtcattgaccccgatcgcgtcatgcggtatgccatcgcc
accaaggacaacggcgatgaggtggtgtccacgctgaagctcaagccagctgaccgaggg
gactctgtgttcttcagctgccacgccatcaactcatacggggaagatcggggtttgatc
caactcactgtgcaagagcccccagatcccccagagctggagatccgggaggtgaaggcc
cggagcatgaacctacgctggacccagagattcgacgggaacagcatcatcacgggcttc
gacattgagtacaagaataaatcagattcctgggatttcaagcagtccactcgcaacatc
tctcccaccatcaaccaggccaacattgtggacttgcaccctgcctccgtgtacagcatc
cgcatgtactccttcaacaagatcggtcgcagcgagccaagcaaggagctcaccatcagc
accgaggaggctgctcctgatgggcctcccatggatgtcaccttgcagccagtgacctca
cagagcatccaagtgacctggaaggcacccaagaaggagctgcagaacggcgtcatccgg
ggctaccagatcggctaccgggagaatagccccggcagcaacgggcagtacagcattgtg
gagatgaaggccacaggggacagcgaggtctacaccctggacaacctcaagaagtttgcc
cagtatggagtggtggtccaggcctttaatcgggcaggcacggggccttcctccagtgag
atcaatgctaccaccctggaagatgtgcccagccagccccctgagaacgtccgggccctc
tccatcacctctgatgtggctgtcatctcctggtcggagcccccacgcagcaccctcaac
ggggtcctcaaaggctatcgggtcatcttctggtcactctacgtggatggggagtggggc
gagatgcagaacatcactaccacgcgggagcgggtggagctgcggggcatggagaagttc
accaactacagcgtgcaggtgctggcctacacacaggctggggatggcgtacgcagcagc
gtgctctatatccagaccaaggaggatgttccagggccccctgctggcatcaaagctgtc
ccttcatcagccagcagtgtggtcgtatcctggctccctcccaccaagcccaatggggtc
atccgcaagtacaccatcttctgctccagccctggctctggccagccggctcccagcgag
tatgaaacaagccctgagcagctcttctaccggatcgcccacttgaaccgtgggcagcag
tacctgctatgggtggccgctgtcacctctgctggccggggcaacagcagcgagaaggtc
accatcgaacctgctggcaaggcgccagcaaagatcatctctttcggaggtacagtgacg
acaccctggatgaaggatgtgcggctgccttgcaattctgtgggggacccagcccctgcc
gtgaagtggaccaaggacagtgaagactctgccatccctgtggcaatggacgggcaccgg
ctcatccacactaatggcaccctgctgctgcgtgctgtgaaagccgaggactcaggctac
tacacctgcacggccaccaacacaggcggcttcgacaccatcatcgtcaacctgctggta
caagtccccccggaccagccccgcctcactgtctccaaaacctcagcctcgtccatcacc
ctgacctggatcccaggggacaatgggggcagctccatccgaggcttcgtgctacaatac
tcagtggacaacagcgaggagtggaaggatgtgttcatcagctctggtgagcgctctttt
aagctggacagcctcaagtgtggcacgtggtacaaggtgaagctggcagccaagaacagt
gtgggctccggacgcatcagtgagatcatcgaagccaagacccacgggcgggagccctct
ttcagcaaagaccagcacctcttcacccacatcaactccacacatgctcggctcaacctg
cagggctggagcaacgggggctgccccatcacagccattgtcctagagtaccggccaaag
gggacttgggcctggcagggcctccgggccaacagctctggggaggtgttcctcactgaa
ctacgagaggccacgtggtatgagctgcgcatgagggcttgcaacagcgcaggctgcggc
aacgagactgctcagtttgccacactggactacgatggcagcaccatccctcccatcaag
tctgctcaaggcgaaggggacgatgtgaagaagctgttcaccatcggctgccccgtcatc
cttgccacgctgggggtggcactgctcttcattgtgcgcaagaagaggaaagagaagcgg
ctgaagcggctccgagatgcaaagagtttggcagaaatgttgataagcaagaacaaccgc
agctttgacacccctgtgaaagggccaccccagggcccacggctccacattgacatcccc
agggtccaactgctcatcgaggacaaggagggcatcaagcagctgggagatgacaaagct
accatccctgtgacggatgctgagttcagccaagctgtcaacccacagagcttctgtact
ggagtctccttgcaccatccagccctcatccagagcacaggcccccttatcgacatgtct
gacatccggccgggaactaatccagtgtctcggaagaacgtgaagtcagcccacagtacc
cggaaccgctactcaagccaatggaccctgaccaagtgccaggcctccacaccagcccgc
accctaacttctgactggcgcactgtgggctcccagcatggtgtcacggttaccgagagc
gacagctacagtgccagcctgtcccaggacacagacaaagggcggaacagcatggtgtcc
accgagagtgcctcttccacctacgaggagctggcgcgggcctacgagcatgccaagctg
gaggagcagctgcagcatgccaagttcgagatcactgagtgcttcatctcagacagctct
tctgatcagatgaccacaggcaccaacgagaacgccgacagcatgacgtccatgagcacg
ccctcggagcctggcatctgtcgattcaccgcctccccacccaagccccaggatgctgac
cggggcaaaaatgtggcagtgcccatcccccaccgggccaacaagagtgactactgcaac
ctgccgctgtaccccaagtcggaggccttcttccggaaggcagacgggagggagccctgc
cccgtggtcccaccccgcgaggcctccatccggaacctggctcggacctaccacacccag
gctcgccacttgaccctggaccctggcagcaagcccttgggcctcccgcacccgggggcc
cccgcttccacttccacagccaccttacctcagaggactctggccatgcctgccccccca
gccggcacggcgcccccagcccctggccctgcacctgctgagccccccgccgccactgcc
accgctgcccccagcgctgcccctccggcccccagcaccgagcctccgcgggccgggggc
ccacacaccaaaatggggggctccagggactcactcctcgagatgagcacatcgggggtg
gggcggcctcagaagcagggagccggggcctactccaaatcctacaccctggtatag
DBGET
integrated database retrieval system
