Ochotona princeps (American pika): 101529034
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Entry
101529034 CDS
T07609
Symbol
POU6F1
Name
(RefSeq) POU domain, class 6, transcription factor 1
KO
K09368
POU domain transcription factor, class 6
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101529034 (POU6F1)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
101529034 (POU6F1)
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GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
101529034
NCBI-ProteinID:
XP_004583369
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Position
4:complement(56499653..56524606)
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AA seq
545 aa
AA seq
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MDPGAGSESALTVNEQVIVMSGHETIRVLEVGVDAQLPAEEEGKGLEGAAAEGSQSGDPA
EAHEPAGEAGPGHPKAPAEATVTPRDPSKSCPQHRHLQPSPKPASGGIADPDAADSTSCP
PGQVAGQQGLAVWTIPTATVAALPGLAAASPPGAVFKPPLAGLQAAAVLNTALPAPVQAA
PPVQTSSPAQPRPPAQPQTLFQTQPLLQTAPAILPQPAAAAAVAPTPKPVDTPPQITVQP
AGFAFSPGIISAATLGGQTQILGSLTTTPVITSAIPSMPGISSQILTNAQGQVIGTLPWV
VNSASVAAPAPAQSLQVQAVTPQLLLNAQGQVIATLTSSPMPPPVAVRKPSTPESPAKSE
VQPIQPTPAAAPPAVPHTQSLDEDGINLEEIREFAKNFKIRRLSLGLTQTQVGQALTATE
GPAYSQSAICRFEKLDITPKSAQKLKPVLERWLNEAELRNQEGQQNLMEFVGGEPSKKRK
RRTSFTPQAIEALNAYFEKNPLPTGQEITEIAKELNYDREVVRVWFCNRRQTLKNTSKLN
VFQIP
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggatccgggagcagggtcagagtcagctctgactgtcaatgagcaggtcatcgtgatg
tcaggccatgagaccattcgagtcctggaagttggcgtggatgcccagctccctgctgag
gaggagggcaaaggactagagggtgcagctgctgagggctcccagagtggggaccctgcg
gaagcccatgagcctgccggtgaagctgggccaggccaccccaaggcccctgcagaggca
actgtcactcccagggacccttccaagtcctgcccccagcatcgccaccttcagccaagc
cccaagccagcctcaggcggcatcgcagaccctgacgccgctgacagtacaagctgcccc
ccaggtcaagtggctggtcagcaggggctggccgtgtggacaattcctacagcaaccgtg
gctgcccttcccggactggccgctgcttctcccccgggggcagtgttcaagccaccttta
gccggtctccaagcggcggctgtgctgaacactgctctcccggcacccgtacaagcggcc
ccaccggtacagacctcctcaccggcccagccccggccaccagcccagccccagacgctg
ttccagacccagccgctgctgcagaccgcacctgccatcctcccgcagcccgctgcggcc
gccgctgttgcccccacccccaagccggtggacacccctccccagatcaccgtccagcct
gcaggcttcgcatttagcccgggaatcatcagtgccgctacccttgggggacagacccag
atcctgggctccctcacgacgacgccggtcattacgagcgccattcccagcatgccaggg
atcagcagtcagatcctcaccaatgctcagggacaggttattggaacccttccatgggta
gtgaactcggctagcgtggcggccccggcaccagcacaaagcctgcaggtccaggctgtg
accccccagttgttgttgaacgcccagggccaggtgatcgcaacgctcaccagcagtccc
atgcctccgcctgtagctgtccggaagccaagcacgcctgagtcccctgctaagagtgag
gtgcagcccatccagcccacacctgctgcagctccgcctgctgtgccgcacactcagagc
ctggatgaggacgggatcaacttagaagagattcgtgagtttgccaagaacttcaagatt
cggcggctatccctgggccttacccaaacccaggtgggccaggctctgactgcaacggaa
ggtccggcctacagccaatcagctatatgccggtttgagaagctggacatcacgcccaag
agtgcccagaagctgaagccagtgctggagcggtggctgaacgaggccgagctccggaac
caggaaggccagcagaacctgatggagttcgtaggaggcgagccctccaagaagcgcaaa
cgccgcacgtccttcacaccccaggccatagaggctctcaatgcctacttcgagaagaac
ccactgcccactggccaggaaatcactgagattgccaaggagctcaactacgaccgcgag
gttgtgcgggtctggttctgcaaccggcgccagacgctcaaaaacaccagcaagctgaac
gtctttcagatcccctag
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