Ochotona princeps (American pika): 101529103
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Entry
101529103 CDS
T07609
Symbol
CXXC1
Name
(RefSeq) CXXC-type zinc finger protein 1
KO
K14960
COMPASS component SPP1
Organism
opi
Ochotona princeps (American pika)
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opi03000
]
101529103 (CXXC1)
03036 Chromosome and associated proteins [BR:
opi03036
]
101529103 (CXXC1)
Transcription factors [BR:
opi03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
101529103 (CXXC1)
Chromosome and associated proteins [BR:
opi03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
101529103 (CXXC1)
COMPASS/SET1 complex (yeast)
101529103 (CXXC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
101529103
NCBI-ProteinID:
XP_004579738
LinkDB
All DBs
Position
9:20119006..20122996
Genome browser
AA seq
665 aa
AA seq
DB search
MIGSHNGGVPQEGDASDPEPPDAGEDSKSENGENAPIYCICRKPDINCFMIGCDNCNEWF
HGDCIRITEKMAKAIREWYCRDCREKDPKLEIRYRHKKSRERDGSERDSSEPRDEGGGRK
RPMPDPDLQRRAGSGTGVGAMLARGSASPHKSSPQPLIATPSQHHQQQQQIKRSARMCGE
CEACRRTEDCGHCDFCRDMKKFGGPNKIRQKCRLRQCQLRARESYKYFPSSLSPVTPSES
LPRPRRPLPPQQPPQPSQKLGRIREDEGPVAVSVVKEPPEATATPEPLSDEDLPLDPDLY
QDFCAGAFDDHGLPWMSDPEESPFLDPALRKRAVKVKHVKRREKKSDKKKEERYKRHRQK
QKHKDKWKHPERADAKDPASLPQCLGPGCVRAAQPGSKYCSDDCGMKLAANRIYEILPQR
IQQWQQSPCIAEEHGKKLLERIRREQQSARTRLQEMERRFHELEAIILRAKQQAVREDEE
SNENDSDDTDLQIFCVSCGHPINPRVALRHMERCYAKYESQTSFGSMYPTRIEGATRLFC
DVYNPQSKTYCKRLQVLCPEHSRDPKVPADEVCGCPLVRDVFELTGDFCRLPKRQCNRHY
CWEKLRRAEVDLERVRVWYKLDELFEQERNVRTAMTNRAGLLALMLHQTIQHDPLTTDLR
SSADR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgataggaagtcataacggaggtgtcccacaggagggagatgcttcagacccggaacct
ccagatgccggggaggacagcaagtcggagaatggggagaacgcacccatctactgcatc
tgccgcaagccagacatcaactgcttcatgattgggtgtgacaactgcaatgaatggttc
catggggactgcatccggatcactgagaagatggcgaaggccatccgggagtggtactgt
cgggactgccgagagaaagacccaaagttggagatccgttatcggcacaagaagtcccga
gagcgggatggcagtgagcgcgacagcagcgagccccgggatgagggcggcgggcgcaag
aggcctatgccggatccagacctacaacgccgggcgggctcaggaacaggggttggggcc
atgcttgctcggggctctgcttcgccccacaaatcctctccacagcccttgatagccaca
cccagccagcaccaccagcagcagcagcagatcaaacggtcagcccgtatgtgcggtgaa
tgtgaggcctgccggcgcactgaagactgtggccattgtgacttctgccgggacatgaag
aagtttgggggccccaacaagatccggcagaagtgtcggctacggcagtgccagctgcga
gcccgggaatcatacaagtacttcccttcctcgctttcgccagtgacgccctcagagtcc
ctgccaaggccccgccggccactgcctccccaacaaccgccacagccatcccagaagctg
gggcgcatccgggaagatgaggggccagtggcagtgtcagtggtcaaagagccaccagag
gcaacagctacacctgagccactgtcagacgaagacctccccctggaccctgacctctac
caggacttctgcgcaggggcctttgatgaccacggcctgccttggatgagtgaccctgag
gagtccccgtttctggaccctgccctacggaagagagcagtgaaagtgaagcatgtgaag
cgtcgagagaagaagtctgacaagaagaaggaagagagatacaagcggcaccggcagaag
cagaagcacaaggacaaatggaaacacccagagagggccgatgccaaggatcccgcgtca
ctgccgcagtgcctggggcctggctgtgtgcgggctgcccagcctggctccaagtactgc
tcggatgactgtggcatgaaactggcggccaaccgcatctatgagatcctcccgcagcgc
atccagcagtggcagcagagcccctgcattgctgaggagcacggcaagaagctgctggag
cgcatccgccgggagcagcaaagtgcccgcacccgcctccaggaaatggagcgtcgcttt
catgagcttgaggccatcatcttgagggccaagcagcaggccgtgcgcgaggatgaggag
agcaatgagaatgacagtgacgacacagacctgcagatcttctgcgtgtcctgcgggcac
cccatcaacccacgtgttgccttgcgccacatggagcgctgctatgccaagtatgagagc
cagacgtcctttgggtccatgtaccccacccgcatagaaggggccacacgactcttctgt
gatgtctacaatcctcagagcaaaacgtactgtaagcggctccaggtgctgtgccctgag
cactcacgtgaccccaaagtgccagcagatgaggtgtgcggatgtcctctggtccgggat
gtgtttgaactcacgggtgacttctgccgcctgcccaaacgccagtgcaatcgtcattac
tgctgggagaagctacggcgggctgaagtggacctggagcgcgtacgggtgtggtacaag
ctggacgagctgtttgagcaggagcgcaatgtgcgcaccgccatgaccaaccgtgcgggc
ctgctggccctgatgctgcaccagaccatccagcatgacccgctcaccaccgacctgcgc
tccagtgccgaccgctga
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