Ochotona princeps (American pika): 101529120
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Entry
101529120 CDS
T07609
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
opi
Ochotona princeps (American pika)
Pathway
opi04136
Autophagy - other
opi04140
Autophagy - animal
opi04211
Longevity regulating pathway
opi05010
Alzheimer disease
opi05014
Amyotrophic lateral sclerosis
opi05016
Huntington disease
opi05017
Spinocerebellar ataxia
opi05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
opi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101529120 (ATG13)
04136 Autophagy - other
101529120 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
101529120 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
101529120 (ATG13)
05014 Amyotrophic lateral sclerosis
101529120 (ATG13)
05016 Huntington disease
101529120 (ATG13)
05017 Spinocerebellar ataxia
101529120 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
101529120 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opi04131
]
101529120 (ATG13)
03029 Mitochondrial biogenesis [BR:
opi03029
]
101529120 (ATG13)
Membrane trafficking [BR:
opi04131
]
Autophagy
Autophagosome formation proteins
ULK complex
101529120 (ATG13)
Atg1 complex
101529120 (ATG13)
Mitochondrial biogenesis [BR:
opi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101529120 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
101529120
NCBI-ProteinID:
XP_004585410
LinkDB
All DBs
Position
1:98719715..98748453
Genome browser
AA seq
550 aa
AA seq
DB search
METDLNAQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLSGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRAAAEDPGV
AYPSVEDSQEVCTTSFSTSPPSQCVFTITKAHFQTPTPVVMDTLRVPMAELAFSHQLSSS
RLSYQPAALGVGSTDLAYPVVFAAGLNATHPHQLMVPGKEGGVPLAPNQPAHGAQADQER
VLTHTTSDGAHCAATPSSSEDAETVSNSSEGRASPRDVLETIFVRKVGAFVNKPVNQVPL
TSLDIPFAMFAPKNLELEDTDPMVNPPDSPDPESPLQCSLHSDGSSGGSSGNAHDDFVMI
DFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVR
EFDAFVETLQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaatgcccaggacagaaaagacctggacaagtttattaaatttttc
gccctcaagactgttcaagtgattgtccaggctcgacttggtgaaaagatttgtactcgt
tcatcttcatccccaacgggttcagactggtttaacttagcaatcaaagacatcccagag
gttacacatgaagccaagaaggccctggcaggacagctgcctgctgttggcaggtccatg
tgtgtggagatctcactcaagacttctgagggagattctatggagctggaaatttggtgt
cttgaaatgaacgaaaagtgtgataaagaaatcaaggtttcctacacggtgtacaacagg
ctgtccttgctgctgaagtctctccttgcaatcactagagtaacaccagcctaccgcctc
tccaggaaacagggccatgagtacgtcatactctacaggatatattttggggaagtgcag
ctgagtggactaggagaaggtttccagaccgttcgtgttgggacagtgggcacccccgtg
ggcaccatcactctgtcttgtgcttacagaattaacttggcattcatgtcaaccaggcaa
tttgagaggaccccacctattatggggattatcattgatcactttgtggaccgtccctac
cccagctcgtctcccatgcatccctgcaactacagagctgctgccgaggatcccggggtt
gcatacccctctgtggaagactctcaagaagtgtgtaccacgtcattctccacctcccct
ccatcccagtgcgtgtttactatcacaaaggcacattttcagacccctactcctgtggtg
atggacaccctgagggtccccatggcagaactggccttttcccatcaactctcaagctct
cgcctttcctatcagcctgctgccctgggcgttggatcaactgacctggcttatccagta
gtgtttgctgctggcttaaatgcaacacaccctcaccagctcatggttcctgggaaagaa
ggtggagtgcccctggctcccaaccagcctgcccacggtgcccaggcggaccaagagaga
gtgctgacccacaccacttctgacggggcccactgtgctgccacaccttccagcagtgag
gatgccgaaactgtatccaacagcagtgagggccgggcctcccctcgggatgtcctggag
accatctttgttcggaaagtgggggcttttgtcaacaaacccgtcaaccaggtgcccctg
acgagtttggacatcccctttgccatgtttgctcccaagaatttggagctggaggatact
gacccaatggtgaatccccctgactccccggatcccgagtctcctctccagtgcagcctg
cactctgatggttccagtgggggcagcagtggcaatgcccatgatgacttcgtcatgatt
gactttaaaccggcattttcaaaagatgacattcttcccatggacttggggaccttctac
cgggaattccagaaccctcctcagctgagcagcctctccatagacatcggagcccagtcc
atggcggaggacttggactccctgccagagaagctggccgtgcacgagaagaacgtccga
gagtttgatgcctttgtggaaaccttgcagtaa
DBGET
integrated database retrieval system
